Array 1 2400-2082 **** Predicted by CRISPRDetect 2.4 *** >NZ_QRJE01000026.1 Bacteroides fragilis strain AM18-6 AM18-6.Scaf26, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ===================================== ================== 2399 35 100.0 36 ................................... GTTCTCATTTAAGAACTGACGCATCTCCCCAATCGT 2328 35 100.0 35 ................................... AACTTTGGGCTTTTAATAAGCTCATCAATCATTTC 2258 35 100.0 37 ................................... GCGCTCTTTTGTTGTATGAGCTGCTGTTCCGATAGGA 2186 35 100.0 35 ................................... ACATTGACCTGCAATTATCTTTATGGCAAAGCAAT 2116 35 85.7 0 ...........................C.A.C.GT | ========== ====== ====== ====== =================================== ===================================== ================== 5 35 97.1 36 ATGTAGATCTATTCCAGTATAATAAGGATTAAGAC # Left flank : ATAGGCATCTTGAAGATTCCCCGCATTCACTCGAAATAGTTTTTTTCTAAATTCTTTTGCGAAAAAAAGAAAAAACTTAGCCATCTGATAATATGAAGATTATTCTATATTAAGAAAAAATAAGTGTAAAAAGAGATGCGCAAATAATAGCTTTTACGTATATTAGCAAATCATTTGCGAAAAAAGGATTGATATGTTATGCGCTCTTTGAAATATTGTTCTATATATCAGCAACTTACGCAACATAGTTTTAGGGTTGTTTTCGAAACTCGCCCACCCCTAAATATCCAACGATTATTTGCGAAAAATGAAGTTTACACAGTATTCTAATTATCAATCATTTAGGTCAAAAAAATCACTATTTACACATCAGAATTACAGAAAAAAAGACCTACTTTTGCGAAAAAAGACTTAGATTCGCATCTACTATTCTGGTTTACAACCTATTATGATCACAGACAAATACATTTAAGAATATATAATAGTCTAATAATCAGAGT # Right flank : TGGTTCTTCTTCAAATTTGGTGGTAAGCTTTCTTCTACTCATGAATCTAATTCAGTTTTCGGAAGTGTAAGCTCTCGTTTATAGTTGACAAGAAAGCAAGTATCCCGGTTTCGCCCGAAAAGCCCATTCGTGAGGCGGAGAAGCGAATTTTAGACTAAACCATCTGAAAATCAACATCTTTAAAAAGTAAGATTTCTATCCTCAAGCTTTGTTTTAACACAGAGTTAAAGCTTATTCTTTGGATGTANNNNNNNNNNAGCTTTGTTTTAACACAGAGTTAAAGCTTATTCTTTGGATGTAAATAACAAGTTCTTTAAATGCAAAAGACTTGTTATTTACGCATAAGAATAAGACAAACCTGAAAAAGGCGTTAACAATGTTAATTGAAGAAAGGTATAAGGATGAAGATACCGGTTCAGACGGTGTAGATTCACTTCCGAAACTTGAGTTATCTGATTCAGCCAGTGTCTGTTTTTTCTTATTAAAGCGTAAGCATTCGG # Questionable array : NO Score: 2.91 # Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGTAGATCTATTCCAGTATAATAAGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.43%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [66.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.68 Confidence: LOW] # Array family : NA // Array 1 127692-125750 **** Predicted by CRISPRDetect 2.4 *** >NZ_QRJE01000004.1 Bacteroides fragilis strain AM18-6 AM18-6.Scaf4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ==================================== ================== 127691 29 100.0 34 ............................. ATAAAAGACTAACCACGTATGCAGCGAGTGGGGA 127628 29 100.0 34 ............................. CTGTTAAAACCTTTGTTACTATATCAAACGAATA 127565 29 100.0 36 ............................. AGACAATTGAGTATCAAAATCAAAAGTTTCATCATT 127500 29 100.0 36 ............................. TACCAAGACTGTCAAACTCAGGAACAGGCCAAGACT 127435 29 100.0 34 ............................. GTCATGGAGTAAGAATGCGCTTAAATTCTATTGG 127372 29 100.0 34 ............................. CAGTTTCAAAGAGGAATGTACGAAAATGGTAACC 127309 29 100.0 35 ............................. ATAGCAAAGCTGAATCCGCCAATTCATTAGCAGGA 127245 29 100.0 36 ............................. AAATTATTAATAAAGATAGGAATCTGTTTAAAGATA 127180 29 100.0 35 ............................. TTCGATATGCTTTGTTGAATAAGGCTTTTAGCAAA 127116 29 100.0 34 ............................. CAGACGAAAAAACAAAGAAAGAGATATTGCGAAA 127053 29 100.0 35 ............................. ATGCTCCTTATTCGGGGATTTGAACGAGTCCTATG 126989 29 100.0 35 ............................. TTTTAAACGCTAAGTTGAACGGCTTAAAAGTGAGT 126925 29 100.0 34 ............................. AACAGAACTCAACACGATTTGGCAAGAAAATAAT 126862 29 100.0 36 ............................. AACGTAAGGCAGAATGCTAATCAGTTAAACATTGAT 126797 29 100.0 34 ............................. ACAAAAGATTATGCGATAACAATAGTTATGGCGA 126734 29 100.0 34 ............................. GTACTACGCAGCAACGGCAAGCAATGTTAATAAA 126671 29 100.0 34 ............................. ACAGAAGAAGGGACTAACTGCGTGAGAGGGTTAA 126608 29 100.0 36 ............................. ATAAACATAGATGATAAGGACGTTTTAAATTCAGTC 126543 29 100.0 35 ............................. ATTGTAAAAGACGGCTACACATTTGAAACCACTTG 126479 29 100.0 34 ............................. TTCTTTTCTTCTTTTTTCAACTCAGAAAGAACCT 126416 29 100.0 35 ............................. TTTCTAAGAATTTTGCTTTTCGTTAGTTCAACATC 126352 29 100.0 34 ............................. CAAATACGAGTAGAACGATGGGCTTGCATAGGAT 126289 29 100.0 34 ............................. TTAGCTTTCAGAGAGAAAAGCATGAAGGCTACGT 126226 29 100.0 35 ............................. AAAGTAACTATTGTATTTTAGTTTGTTCCTCGAAA 126162 29 100.0 34 ............................. ATTCGCATAACGAAGTTCAAAAACCGAGTCATTA 126099 29 100.0 34 ............................. TCAGGAAAAGAAGTATAGTGTAAATGCGTCTTTT 126036 29 100.0 36 ............................. TGTTGAACAGGTAAGGACGCAATTAGATCGCATTCC 125971 29 100.0 36 ............................. CTCAAACGACTAACACACCACCACCGCAACAACAAC 125906 29 100.0 35 ............................. TCGCGCAAGCTCATCGTATTCTGATTCATCGTATT 125842 29 100.0 35 ............................. CTGAGAAAAAAGCAAAATAAAGATAAAATGACAGG 125778 29 86.2 0 ..A......................G.CT | ========== ====== ====== ====== ============================= ==================================== ================== 31 29 99.6 35 GTGTTAATTGTACCTTATGGAATTGAAAC # Left flank : CCGTTTAAAATGTATTGGTAAATATGTATGTTATTTTAGTTTATGATTTTGGTGAAAGGAGAGTTTCTAAGATGTTGAGATTATGTCGTCGGTATTTGAATTGGATCCAGAATTCTGTGTTTGAAGGTGAACTCTCGGAAGTACGTTTAAAAGAGCTATTATTATTGGCAAAAGGGTTTATGAATCCCGAAGAAGATTGTATTATCATTTTTAAAGGGGCTACTCAATGCTCTTTGGAGAAGGAAATAGTGGGTAAAGAACTTTCTAACATCGATAATTTTTTGTGAAACGGTTGTCGAAGTGGATCGTTATTGTGAATTATTCAATGATAATGCAACCGAAACGCTCTATGACGTGTTGATACATAGATGTTTAGCGCCTATGTCGCTAACCCATGTTTTTTATATTATTCTTGATCGACGCATTATTTCTAAATAAAAGTATTTTTTCTAAAAAGTATTTGTCTTATTACTAAGTGATTGCGTTGGTTGATGGACAGG # Right flank : AAGGAAGATGTATATTTATAAGATTGGCTTAATAGAACTTAATAGAATGAATTTTTTTTTCTTGCTAGCATATTCTCTCATTATCTTTTGGGAAATGTTTTTATTAATCCTATTTCCTTTTTATTAGAAAACAATCCTTATATTTGTCCCTTGTATTATTAATTTAATGACAAATGACACTTATGAAGACATTGAATTTTATGAAGATGCTGCTTTTATTGGTAGCTATAGTAGGCTTGAGCTCTTGTGGCGACAAGTATTATTCAGATGATTATTTGCGAAACAGTAATGCAAAGTTATGCGGAAAGACTTGGGTGAATGATTCTGATAAAAATGATGCGGATGAATGGGTGCGCCATACATTGAAGTTTGATGATAGCGGACGGCTGGCAGAAACTTATGCTTATTATCATTTGAATGAAAACCAACCTTACCGGACAGAAACAAATAATCTGACTTGGTCCTGGATAGACGATTCGATGGAAGGAATTGTTTTTGAC # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTAATTGTACCTTATGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : NA //