Array 1 39044-35112 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJNTD010000013.1 Lactobacillus delbrueckii subsp. lactis strain FAM 24847 FAM24847-i1-1_scf13, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 39043 28 100.0 33 ............................ CCACGCTTGAGAACTCAATGGTTACTGAGTTTT 38982 28 100.0 33 ............................ CTATGGCCTTGATGAAAAAGAAGCCGATGAATG 38921 28 100.0 33 ............................ TGATGGAACAAGATATCTGTTTGCGTCACGACG 38860 28 100.0 33 ............................ TAAGCCAGCGCGTGGTGGGCTTCATCGATCAAA 38799 28 100.0 33 ............................ TTCCTCTGCGCTCCCCGGTTGGGTTTTAAAGCT 38738 28 100.0 33 ............................ CATATCGGGTAAGGCCAACTAGTCAAGTTAAGA 38677 28 100.0 33 ............................ TAAGTATCAAGATAAAATTTACTGTAATTCCGG 38616 28 100.0 33 ............................ TCAATACTACTCGATGTACGGGATCCGTTGGCA 38555 28 100.0 33 ............................ TAATCTAGCACTAACTCTTTGTTTAATTATTTT 38494 28 100.0 33 ............................ TATCGGATTCTCTCATGATTTTAAATGCCCCAT 38433 28 100.0 34 ............................ TAACAACTTGACCACGATCAAGGCTCTTGACCAA 38371 28 100.0 33 ............................ TACAGGCGAATCAAGACAGCAATCAGAAAGGCA 38310 28 100.0 33 ............................ CGGAGAATGGTGTAACGGCGTGGATTTACGGTG 38249 28 100.0 33 ............................ TTTACCTTTGAATTTTTCCGTTGATAAGACTTC 38188 28 100.0 33 ............................ TAAGAGTCCAAGTGTATTGGGTTGGATCGGTGC 38127 28 100.0 33 ............................ TTACAGCGAAAGCAGAGTTAGAAATATTGCCAA 38066 28 100.0 33 ............................ TTGTTCTGACGCCGTGACGTAAGCAGATGTCCT 38005 28 100.0 33 ............................ TCAGAGACACCACTGCGTTGACGGTTTCGCCGG 37944 28 100.0 33 ............................ TTCTTGATCTCTGCCTTAGCTTGGTCGACCGTG 37883 28 100.0 33 ............................ CATCGCCAGCTACCTGGCAGCTGAAGAGTCAGA 37822 28 100.0 33 ............................ CTTAACGGCCATGACATTGAGAAGGCCAAGGGG 37761 28 100.0 33 ............................ CTCTGCTGTCAAGGAAGCTCTGGCCAACGCTCA 37700 28 100.0 33 ............................ CTTTTGGAATGCCGGTCTTGCCCGCCCACTGAT 37639 28 100.0 33 ............................ CAGCAAGGCTACTGTCAAGACTATCTTAGGTAC 37578 28 100.0 33 ............................ TTTCCTGATTAACAAATTCGTTGGCTTAAACGA 37517 28 100.0 33 ............................ AGTACTACTGGACAGTAGAAGATGGACAGGTGG 37456 28 100.0 33 ............................ TGGCTGCCGAAGTAGTCATAGTCGATGCATCCT 37395 28 100.0 33 ............................ AATTTTGTTGGTTTCAGTTGACCCCGCTTTTGG 37334 28 100.0 33 ............................ TTTTTCACTCATCGATGCCCTCTCTTCTTCGTA 37273 28 100.0 33 ............................ CGTCGTTGGCGACGGTGTTGTTTCAGAAGTGTC 37212 28 100.0 33 ............................ CCTCTAGTAACTCACATACGTCACCAGGGCGAG 37151 28 100.0 33 ............................ TTTCGAGTTAGCGGTGGTAAAAAGTGAAGTAGT 37090 28 100.0 33 ............................ TCAAAGCGGGTATTTTGGCTGTTTGCAAAGATC 37029 28 100.0 33 ............................ TTGAAGAACTGGAGTTGTGAGAAAATGCAAAGT 36968 28 100.0 33 ............................ CTCAATGGTGGCCCAGGTTGGGCCAATTGTGAC 36907 28 100.0 33 ............................ TTTACTCTGGCGCATCCCTGCTGCGGACGGCTA 36846 28 100.0 33 ............................ TCGCAGCCCAGGCCCGGGCTCTCTTGGCTTCTG 36785 28 100.0 33 ............................ TCGTTGCGCCTTTTTTGTAGATCCCGCCTTTTA 36724 28 100.0 31 ............................ CTTACTTTTTGTAAGCAAAAAAGCTAACCTG 36665 28 100.0 33 ............................ TCTAGCAAGCTTTCAAGCTTGCAAACACAATTA 36604 28 100.0 33 ............................ TTCCCATGAGTTCATGAGAATAGATGGAATTGA 36543 28 100.0 33 ............................ CGTGTTTAAGGCGTCTATGCATGATTGCCTTTA 36482 28 100.0 33 ............................ CGCCTTACTAGATAGTAGTAATAACATAATTCA 36421 28 100.0 33 ............................ CTAATGAAAATGAGTTGATTTCTCTCAAGTCTG 36360 28 100.0 33 ............................ TTAGTTTGATTCGGGCTGAATTGAAAGCACCAA 36299 28 100.0 33 ............................ TCACCGATTTTTCCGGAGATACGCATAAAGACC 36238 28 100.0 33 ............................ TTGTCATTGTGAATCAGTACACCGAGACCATCA 36177 28 100.0 33 ............................ TGGCCGTGCCGCCATTTACGGTGTCCCACAGTT 36116 28 100.0 33 ............................ CTTGACACCGTTTTTTAGTAGCAAGCCCGGGGA 36055 28 100.0 33 ............................ TTAAGAAGTTTTTTTATTTTTTCTTTTCGGCTA 35994 28 100.0 33 ............................ TTTCAGTTTGCGAAATATCGAACACGCAAACCG 35933 28 100.0 33 ............................ CTTCACAAGCGTTCTTAGTCAAACCATCGACTA 35872 28 100.0 33 ............................ GAAGGGTGAGACCAACGCACTGGCAAGATGTGG 35811 28 100.0 33 ............................ TCAAAGTTAGGGTTACGGCGCCAGGCCTTAAGC 35750 28 100.0 33 ............................ TCACTGGAAATGGAGGATTAGATGGCGAAAACA 35689 28 100.0 33 ............................ TCACCAAGAAGAAAAGCTTGTAGAGGGCTTATA 35628 28 100.0 33 ............................ TTATACGCGTTTCCGTCGGTAATGCAAGCATAA 35567 28 100.0 33 ............................ CCCTCACAAATTTTTCCAGTTCCTGGTGTTCTT 35506 28 100.0 33 ............................ CTGCCAACACTGCAGACTTACATGATCTGCTGG 35445 28 100.0 33 ............................ TGATCAGAACTAGAATCTACCCGGTTACGGGCT 35384 28 100.0 33 ............................ CCCTCACAAATTTTTCCAGTTCCTGGTGTTCTT 35323 28 100.0 33 ............................ CTGCTGAATGAACTCATCAACCGTGATGCTGCT 35262 28 100.0 33 ............................ CTCAGACTATTCTACTTCAGACTTCATCTATAC G [35245] 35200 28 100.0 33 ............................ TAGCTCGTCTTGAACAGCATTTAGTAAATCGCG 35139 28 85.7 0 ............T.T.......CA.... | ========== ====== ====== ====== ============================ ================================== ================== 65 28 99.8 33 GTATTCCCCACGCAAGTGGGGGTGATCC # Left flank : GGATTGAATACGGAAAGTGATCAGATTTTGTCTATTGGCGCGGTGAAACACGATGGTACAGAATTCTACCGACTGATCAAGCAAGATATTGATGTGCCAAAACAGATAGTGGAGCTGACCGGGATAACTCCAGCAATGCTTGATAAGGAAGGTGTCCCACTGCAAGATGTTTTGGGAGAACTAACTGACTTTGTTGGGGATGTGCCAATCGTTGGGTATAATTTTAGATTCGATTCTGCATTTTTGAATAGGGAATATCGGAAATGCGGGATGCAAGAATTAAAAAATGAGATCAAGGATTTGCTGCCAGTTGTAAAAAGAAAAGAAAAATTTCTGGACAACTATAAGCTACAGACTGTATTATCAAACTACGGGATCGAAAACAAGGTGCCGCATAATGCTGTGTCTGACGCAAGGGCTACGAAGGAGCTGGCGATGAAACTAATCAAAAATCGCATTTTGGTGATTTGAGAATGGCGTCGCTAAAGGGATCCATTACT # Right flank : GTTCTTTATGTTATTGTGCTTTTCGTACTGTGTATTTTCCATACATATGCCGCGATGATCATAAGTTTCAGTTAAAGCACAAGCAAATTTCAAGGATCTTTGGTAGAGTAGAGAGGTAATAGAGAAGGAGTGAGGAACAAACATGAGCATTTACGGTAAGTACGCCGATTATCTTCCACAGATCCTGAATTCTGTTTTGCAGCAAATCCAAGGCATCGGTCAGGAGTATAGTGCAAAACACGGGCAAAAGCTATACGAGTACCTGAAAGGTCGCGTCAAAGGCGAAGAAAGCATGACGCAAAAGTGCGAAAGAAAAGGTTTACCGCTGACGCCAGAGTCTGCATTGATCGAAAATCGAGATGCGATCGGCCTCAGAATCGTCTGCAACTTTATTGACGATATCTACACTTGCATTGACTTGTTGAAGAAGCAGGACAACTTCAAGATAATTAATGAAAAAGACTACATTACCGATGCCAAGACAAACGGCTACCGGTCAT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACGCAAGTGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCACGCAAGTGGGGGTGATCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.70,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //