Array 1 2317-1870 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNCN01000040.1 Sinosporangium album strain CPCC 201354, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2316 29 96.6 32 ............................G GGCTCCGACGAGCACCTGGCCCCCATCGGCAA 2255 29 96.6 32 ............................G CCGATCACACTCCTCTGCGGTGCCAATCCGCG 2194 29 100.0 32 ............................. CTGTAACCGGCCCCGGGCCGGGTCCCCGTCCG 2133 29 96.6 32 ............................T GTTCCAGGCCCCGCACTGCACTAAGGAAGAAA 2072 29 100.0 32 ............................. GAAGGGCCTCACCACACGGCGAGGTTCTGAGC 2011 29 96.6 32 ............................G CCAGGGACTGTGTTTCCCCAGTTCAACGCACC 1950 29 100.0 23 ............................. GCGGGGACAGACCGTATGGCCGG Deletion [1899] 1898 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 8 29 98.3 31 ATCGCCCCCGCGCACGCGGGGATGGTCCC # Left flank : CAGACGGACGGACCATCCCCGCGCGCGCGAGGCCGACCCGAGGTGGCGGCGAGGAATGTTCGGCGATCCAGGACCATCCCCGCGTGCGCGGGGCCGACAGCGGTCACTTCCGACCGCCCTTCTTGCCGCTCGGACCATCCCCGCGTGCGCGGGGCCGACGCCTGGCCCTGGATCCCCGAGGCAGGCACCATGGGGCCATCCCCGCGTGCGCGGGGCCGACCGCCAGGATCTCCCGGGGCGGTGTCATCTCCTCGGGCCATCCCCGCGTGCGCGGGGCCGACGCGGAGATCACGCTCAACAACGATGACCGCAGGGGGCCATCCCCGCGTGCGCGGGGCCGACACTCGCTGACCTGGGTCTCTTCTACGCCGGGAGCTGTTTTTCATTCGGTTCGGAATGGCTTGTGGATCTCATGCTGCGGCTATGGCTTCCAGGGATTGTCGGTCGGGATATCTAGTGTCCCACGGGTGGGATAGAGCGCCATGAGGTCAGGGAGGGCG # Right flank : TGCACGCCCATCTCCATAGCAGCGGCGGCCTGATCGCGTCGAAGAAGTCGAGGCTCAGTACGGCGAGGTGATGGCCTTCGTGCACGACGGCGGGAAAGCCGAGTGGGCGAGTTTTTCACGTAGTCGCTCGGCAGCCCGACCTGTGGGTGAGGGCGATCACTGATTCGGCGTCGCAGTTCGGGGATGCATAGCGGGTGCAATGGTCTTAAGGATCGGACTTCCTTGTGTCTGGCGTCCGGTCAAAGGCCCGTGGGGTGAGTCGCTTTCATCTCGCGGGTCCGAATTGTTTTCGGAGCTTTCTTTTCGGTGGATGCCGATTGGCCGTGCTGTACGCCCATAATCAGGGGGGTGGAGCTCCCTGGTCACCAGGTAATGATGTGTGATGGTCGGTGACAGTAGAAGGCCAATAGTTGGACACATCCGGTTGTCCAACCGTGTCCAAGGAGGTCGTGTGGCTGGGATTCCAGGTGCTAGCCCGAGCGAGCAAGCTGGTTGGGACC # Questionable array : NO Score: 6.07 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:-0.07, 8:1, 9:0.98, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCGCCCCCGCGCACGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [36.7-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 2475-2869 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNCN01000040.1 Sinosporangium album strain CPCC 201354, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2475 29 100.0 32 ............................. CTGCGGTCATCGTTGTTGAGCGTGATCTCCGC 2536 29 96.6 32 ............................G AGGAGATGACACCGCCCCGGGAGATCCTGGCG 2597 29 100.0 32 ............................. ATGGTGCCTGCCTCGGGGATCCAGGGCCAGGC 2658 29 93.1 32 .........................T..G AGCGGCAAGAAGGGCGGTCGGAAGTGACCGCT 2719 29 93.1 32 .........................T..T GGATCGCCGAACATTCCTCGCCGCCACCTCGG 2780 29 86.2 32 .......T.....G...........T..G TCCGTCTGGATCTCGACCCGCACCCACTGCAC 2841 29 89.7 0 ...........A.............T..G | ========== ====== ====== ====== ============================= ================================ ================== 7 29 94.1 32 GTCGGCCCCGCGCACGCGGGGATGGCCCC # Left flank : GTCCCTGGCGGACCATCCCCGCGTGCGCGGGGGCGATGCTCAGAACCTCGCCGTGTGGTGAGGCCCTTCGGGACCATCCCCGCGTGCGCGGGGGCGATTTTCTTCCTTAGTGCAGTGCGGGGCCTGGAACAGGACCATCCCCGCGTGCGCGGGGGCGATCGGACGGGGACCCGGCCCGGGGCCGGTTACAGGGGACCATCCCCGCGTGCGCGGGGGCGATCGCGGATTGGCACCGCAGAGGAGTGTGATCGGCGGACCATCCCCGCGTGCGCGGGGGCGATTTGCCGATGGGGGCCAGGTGCTCGTCGGAGCCCGGACCATCCCCGCGTGCGCGGGGGCGATCGCCCTCCCTGACCTCATGGCGCTCTATCCCACCCGTGGGACACTAGATATCCCGACCGACAATCCCTGGAAGCCATAGCCGCAGCATGAGATCCACAAGCCATTCCGAACCGAATGAAAAACAGCTCCCGGCGTAGAAGAGACCCAGGTCAGCGAGT # Right flank : GGCGGGTGCGGCGGCGTCGAGGGTCGATTCCGTGAGAGCGCTGAGGCTTGCAGATGCCCGTTGCGCTTCTCCGATCATGGTGGCGTTGAAGCCGGATTCGACGGATTGAAGCGGGACAGAACCGGTTCTGTCCAGCGCAGCGGGCTGGCCTCGGGGATCTCGACGACACCGGTGACGGTGAACTCGACTGACCGTTCGGCGCCGCACGCGGGATTCCAGTCGGTGCGGGCGGTGCCGGTGAGTTGCAGGGTGGCGCCTGTGCGCCAGTCGGGGAACAGTAGCCCGGCCTTGGGCTGGACTTCCAGGTTGCCAAGGGTGTTGAACATGGCGTTGCCGACGTAGTCGGGCCAGCGCACGACGGTCGGTGACAGCACCTCGACGAAGCCGGGGTTGCCGCCGCGGTGGGAGGCGTCGGCGTTGCCGTCGAGGTCGGCGGTGGCGATGAAGAACGTGTCGGCGGCGGCTATCAGCCGCCGTTGGCCGTCCGTCAGGGCATGGGA # Questionable array : NO Score: 5.52 # Score Detail : 1:0, 2:3, 3:0, 4:0.70, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.56, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGCCCCGCGCACGCGGGGATGGCCCC # Alternate repeat : GTCGGCCCCGCGCACGCGGGGATGGTCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [2,2] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGGCCCCGCGCACGCGGGGATGCTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 35612-36102 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNCN01000013.1 Sinosporangium album strain CPCC 201354, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 35612 30 100.0 39 .............................. CCCTCGGGTCGGGGACATACCGCGCGGGAAGCGTCTCCC 35681 30 100.0 36 .............................. CACGCAGATCGCATTGTGCGGGCGCTCGTTGCCGAC 35747 30 100.0 35 .............................. GCTCATCGTGGTCCGTGCGTGTGCTTCCCGCGCAT 35812 30 100.0 35 .............................. CGGGAATGGGAGACGATGCCCGCCTCACGGCACAG 35877 30 100.0 37 .............................. TCATTCCGTTCGTGCTGGGCTGGCTCACACGCAAGGG 35944 30 100.0 34 .............................. GCAGAGTGCCATCAGTCTGTCATCTCGGCGTCGC 36008 30 96.7 35 ........T..................... TCGACGCGGCCGAGTTCGGCGTATTCCGCGTGCTG 36073 30 93.3 0 ............................CG | ========== ====== ====== ====== ============================== ======================================= ================== 8 30 98.8 36 GTTCTCATCGCCCCTACGAGGGATCGCAAC # Left flank : GTCCTCCGCCGCCAGGCCGCCCGCGACCCCGCCACCGCCTGCGACACCTGCCGCAAGCGCACCCTCACCCCGCCCCGTCCTGGCCGCAGGCCAGGCCACCCCCCAAGCCTCCCTCGGCGCCGTGGCCGCCCTCCTCCTCATCGGCGCCCTCTGGTCCGCCTACTGGCCCCTCCTCCTATGGCGCCACTTCACCGGCCCACGCTGCACCTGCCGTACGGCAAAAGCCACGGAACGTTCGCCTGACAGGTAAGGGATCGGCACGCCGGGCTTGCGGCATACGGCCGAAAGGGTTCTTCGAAAGGCCGCAGATGCTTCTCTTAGAGCGACGTGGCTATCCAAGGCGTCGCCGGCGCCGACCAGTTCGCACCCCCGGACAGCGTAGGGTGGAGGCGGTGGATTGCAGCAGACCTCCCGGGGAGAATGCACTACCGGAGGTTCACTGCAAAACACCGCCGGATCCCAGGGTCCACCTGGCTTATGAGCTGGGCCTTTACCATGGG # Right flank : GCCTCTGCCACGGCGGGCTGATTGTTTGGTCGGCCGAGTTGCTGGGCTGGCTGTCTGGGTGCTGGCCGCTTTGGTGCGGCGGGCCGAGGTGTCGGGAGTCGGCCCTGTCCCCGTTCAGGAGTCGGTTGGCTTGGGAGTGCGAGGGGGCGCCGGTGCTTGGACTGAGGAGCGTCGGGAGCGTAGCGACCAGAGCGACGAGGGAAAGCACCGGGTTAAGAGCCCCCTCGCCGCGCGCCGAAGGCGCGCAATAAACACAGCCCCCTCGCCGCGACGCGAAGCGTCGCCATCAAACACAGCTCCCGCCATACACGCCTGTCAGGACAGGTTTGCCCCCGAGGCGCGGAAGCTCGCGCTGCCGTTCGCCGTGTTGACCGTGACGCGGTTGCCCGAGCAGGTGACCGATGGGGTGTCGGTGCCGGGGACGACGACGGTGAGCAGGGCCGGGGCGGCGGGGGAGACGACGGCGGCGGCGGGGACCCGCTGCATGTAGGTGGGGGAGA # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTCATCGCCCCTACGAGGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.30,-5.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 1 182056-182392 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNCN01000010.1 Sinosporangium album strain CPCC 201354, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================= ================== 182056 30 100.0 31 .............................. GGCCCTGCACCCCGGCCCGCGCATCGCCGTG 182117 30 93.3 31 ............................CA CGAAGTGGCCTTTGGCTCACCATCGCCCGTG 182178 30 93.3 31 ........T...................C. CACCCGAGTGGCCGAGGTTCTCGAACGGCCT 182239 30 93.3 31 A...........................C. CTGATCCGAGAACGGCCTGACGCCATGCATC 182300 30 80.0 33 A.......T..T..G......A......G. CCGCCGGTTCAACGCATGCGTTGCAGGTGGGCC 182363 30 90.0 0 ............T........A.......G | ========== ====== ====== ====== ============================== ================================= ================== 6 30 91.7 32 GTGCTCCCCGCGCACGCGGGGGTGGTCCTT # Left flank : CAGGGCGGCCACCGCACCACTATCGGCCATGTGCCGCCACAAAGGCAGCCAGCCATCGGTTCGCCGGTCATGTTTGGCCCAGACCGTCCGGGCGGCTATCGACAACCCTTTGCTGAAGGAACGGCCAGGCCGCTCGTCGTCAGGCATGACGATATTTAAGGGCAGAGACCTCGACGTTTTCCGGGAAATCGAAATTTTTCTTGGATTAATGGGTCGCGCGGAGCGCTGGACAAACACCATTGAGCTTGTTTGGCCACCAGGCATCCACGAAGCAGGTAAATGGAACAAATCATCCCAGGGCCATCGCCTATACCGCAAAATCGCCCTACACGGCCTCCTGCCCCCGGGGCTCCCCGGAAGAACGACTTGCCCGACGGCTCCCCGACGTGCACGCTAACGCTGTGCCCTCCCAACCCATCCACTCCACACCCGAAATGTCCGACCCAACGAAAGTGCTTATTTTCTGGGCTCACCCGTGACAACGCCGCAGGTCGGCAAGG # Right flank : GTGGTCAGGTGCCGCTGGAAGGAGAACGTGACTGAACCGAGTGGGTACGGCGCAAGCCGTACAGGACTTTCGATTCGGTCTCCAAGGTTTCGACGTAGACCGCGGTCGTTTCCGTCTTCGGGGGACCACATAGGCATGGCCGTGCCGTACGCGTGTGGGCGGACGGCACGGCCGTTGGGTTATCGGTCGGCCGGGCGGGCCGGTTTGGCGGGGCTCGGCTTGGTGGCTTTGATGCCTTTGACGATTCTGTTCAGGTGGCCTTTGAGGGCGGGGCTTGCCATGACGGTGACGGCCATTCCGGGGCGTTCGATCCAGCCGAGGTAGGTGCCGGGGCCGAGGGCGCCGTCGCCTTTGCGGACGAGGACTTTACGGCCGCCGATCTCGGCTGGTCTGGCCATGCGCGTGAAGGTGCCGATGTCGACGGGGAGTTTGGCCAGGCTGGTGAGAGTCTTCAGGTGGGGTGAGCAGACGACGCGCACCCAGAGGGCACGGCGGGCGCG # Questionable array : NO Score: 3.76 # Score Detail : 1:0, 2:3, 3:0, 4:0.59, 5:-1.5, 6:0.25, 7:0.01, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCACGCGGGGGTGGTCCTT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGGTGGTCCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.70,-9.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 1540-2368 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNCN01000006.1 Sinosporangium album strain CPCC 201354, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 1540 30 100.0 37 .............................. CGGTTGCAGCGTGAGCAGACCACGCCGGCGATGCCCG 1607 30 100.0 36 .............................. CCTCCATATCTTCCCTCATTGGAAAGAGTGGCACGT 1673 30 100.0 37 .............................. CGCGGGACCGCACCACGGCCATCTCCAGGGCGATCTG 1740 30 100.0 37 .............................. CCGACGGGAAACTTCCCCCGGCGCCCGGCATCCACAA 1807 30 100.0 36 .............................. ACGATTCGCACTGCCATAGCCCCCACCACCACCGTC 1873 30 100.0 36 .............................. ATCTCGTCGCCGACTTCGTCGCTGATGAGCTCCCGC 1939 30 100.0 35 .............................. CTGAAGGCGTACATGAAGAAGAAGGCGCTGGGTGA 2004 30 100.0 37 .............................. ATCGCGTCATCGACCACCCCGGCGCCTCTACGGACCC 2071 30 100.0 37 .............................. ATCCTGGACATGTAGCTCTGGCTGATGCCGACGCGCT 2138 30 100.0 36 .............................. ACGGCCTGGAGCCGCTCCCCGGGTGGGCCGCCACAG 2204 30 100.0 39 .............................. GAGAACGCCAGTCGGTTGAGTTCCAGGAACCCGTGCCAC 2273 30 96.7 36 ................G............. ACGACTCGCCCATCGGTCCTCCCGCGTACCGCCTTG 2339 30 83.3 0 .C.......A......G......G.....A | ========== ====== ====== ====== ============================== ======================================= ================== 13 30 98.5 37 GTCCTCATAGCCCCTGCGAGGGGTCGCAAC # Left flank : CTGCGCCACCGATGGCCGACGTCGCGGTCGCCGCCCTCGGAGCCGCGGCACGCAACCCGGAACTGGCCGCAGGAACGCAGCGGTTCTTCAGGGACCGGTTCGCCCAGGAGACAACAATTTTCGAACAGGCTTTGGGGCGGGGAGAGTTGAAACCCGAGGTGGATCCCATGGCAATAGTGGATTTGCTGGCGGGAGCGGTTTGGCTGCGGGTTGTCTTTCGGGGACTCCCCGTCGGGGAGGATTTCACGGAGGGCATTGTGGACGTGGTCATGGGGGGTGCGGGCCGAGGGGGTTAGTGGTTCCGCGGGAGGACATCTGGGGGAAGAACGTCAAGTGGCTTGGTTGTCCAGTTGGCGGGACCTCGGCCGGGTGGTTTGCGTAGGCTGGAGGAGCCCAAGTGCAGCAGACCTCCCGGGGAGTTTGCACTACCGGAGGTTCACTGCAAAATAGGCTGAGAACGGTGGGAGTTCTTGGCCTTTGAGCTGGGACTTTACTGTGGG # Right flank : ATGATGCGGCCTTCAGAAGCGCCAGCATGAACGCTGCCGTCTGGCCAGGAAGCCCTTCTTCCTGGCCAGACTGCGTAGAGCCGCGCAGCTACCTCATCAGCGGTCGAGTGAGGTGGTGGGCGACCCAGTCGAGGTCGGCTTGGGCGGCGAGGTGGACGAAATGGCGTAGGAGGATTTCGGCGTCCTGTGGCGGCAGGTTGAACTCTTGGCCTATCCAGGGGAGGAGTTCGTGGGCGGCGGGGACTTCGGGGGCGCACAGTTTGGCCAGGAGTTGCCGGTAGGGGTGGTCGGCTTGTGCCGTACGGCGAAAGCCTGGAGAGGTGGCGTGGTCCGGCAGGGACCGGCTGGACCCGTTCGCGGGTGGGCCGGCCTGGAAGTCGGCCGGGCCACGGCTGCCCTTTATGAGGTCGGCTATGAGGCGGCGAGCTCGTTCTTGGTCTTCTCTTTCGGTGTAGAGGTCTTCGGGGCCGGACAGCAGGGGTTCGGTGGTGCAGGTGCCG # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCATAGCCCCTGCGAGGGGTCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.80,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 1 93100-92339 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNCN01000011.1 Sinosporangium album strain CPCC 201354, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 93099 29 100.0 32 ............................. ATGAGGCACGACTCCCCGCTGGACTTTGGCAG 93038 29 100.0 32 ............................. GGTGGTAAAGCCGGTAGGTGTTATGTAAAGTC 92977 29 100.0 32 ............................. GCGTTGATCGAGGCGAGCCACACAGCGCGCGA 92916 29 100.0 32 ............................. CCGGTGATCCAGCGGTGAACGTGTTGGACTGC 92855 29 100.0 32 ............................. AACTTCTTGACGGAGATCCTCTTGAGGTGGAC 92794 29 100.0 32 ............................. ATGTACAGCAGAATGCTGCCGTCCTCGCTGGC 92733 29 96.6 32 ............................T CAGTGCGTAGATCTCGCGGATCTCGGGATCGA 92672 29 100.0 32 ............................. AACGCCTCGGGGATGAGGGCGAGCTCGTCGAC 92611 29 100.0 32 ............................. CGCTTTGGGAGACGGCGGTCTCCCAGCGGTTC 92550 29 96.6 32 ............T................ ATGATGCCGCTCGGCTTGCGTACTCGGGCCCA 92489 29 93.1 32 ...T........................T CCGTGCTGGTGAGCGAGCGTGATCCTTTGCCC G [92466] 92427 29 89.7 32 ...................A....AC... GCGGCGGCACTCGCCGCCGCTCCCGATTCCCG 92366 28 93.1 0 .....................-..A.... | ========== ====== ====== ====== ============================= ================================ ================== 13 29 97.6 32 GTTCTCCCCGCGCAGGCGGGGGTGGTCCG # Left flank : GCGCGGCCGTGTCGTATTCCTCGACCATCCGCAGTTCGTAGGCGGCCGTGAAGTGCCGGCGTTTCGGTCGGCCGGCCCGCGGTCCATCGCTGCTGTGGAGGTCATGGTTGCTCATCGTCACGTGCAGTACCCGATCTCGCCCTGCTCATATCATCCTGTGATCTTTGACCCCTTCCGTCTCACTTGAGCCTGACGCAGAGGGGAGCGCCCCGGCAATCGCCGCGGTGTCGATGAGATGACAGACCACCGGATAGGCCCGGCAGCTTGTCGCGCTTCCCCCACAAACGCGCGTCAACCGACCACAGAGACTCTCCACCAAGATTCTCTACAGGCATAGGCTCGGCTCCACACATCGCGACTCGGCCTTCGAGGCAACTGCACCACACACCACCGACAAAATCGCACGAGCGCGTAAGCTCTCCCCATGCCAAGCCATCCACCACCCCAGCCCTCAAGGTCACAAATCAGCAACGCCCCCCTTTAAGCCCAGGTCAGCAAGT # Right flank : ACTGCGAAACGCGATCGTCCAGCCCTCGGCACTGTCGACGGCACGTGAAAACCGACCCCGTACTCAGAATGGACTGATACAAGCCCATTTGCCGAGCTTTCCGAGTTACCGCGATACGGCTTGGCGCCCGGAGATGGTTGTAGAGGTACCGACGCTGACGCCGAGAACCATGGCGAATGACGGGGTGGGTGAGGTTAGGGAGCATGTCGGTGTCGACAACGGCGGGCACTCCCCTCACGCGGCCCCAGGCTCTGGAGGTGGCCAGCTCTTCTCGGGCCCCTTCACGTCCCCGAATGAACGCGGCCAAGGGTTCACGCCCCTGCCCAAGGGGCGACAGCCCCAACGAGGCCAAAGGATCAGAAGGCCACCAACAGGGAACATGGCCGAGGGGCGCGAGCCACGGGGGTGCGGGTGGCGGAGCCCCCGCAAGCGAGCGAAGCGAGCACTACACGGCGAGGGCGACGCGGCCAGCGCATGTTGCGCGGCACACGTCGCCCTCG # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTCCCCGCGCAGGCGGGGGTGGTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCTCCCCGCGCAGGCGGGGGTGGTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-11.90,-13.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 100103-99220 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNCN01000011.1 Sinosporangium album strain CPCC 201354, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 100102 29 100.0 32 ............................. ACCTTGGCGCTTCTGCCGGACAACATGCACGC 100041 29 100.0 32 ............................. TCGCAGCTCGTCAGCCTCGTCAGGCGTGGGCA 99980 29 100.0 32 ............................. GCTCCCACCGTGAAGCTGCGCGTCACCTCGGC 99919 29 100.0 32 ............................. AGCCCGGCGTCCGAGCGGCGTACGACCAGATG 99858 29 100.0 32 ............................. GATGACGGCGATGGCCGGTCCTGGCGGCTGGC 99797 29 100.0 32 ............................. CCGCGCCGCAGCCCAGCACCACGCCAACACCT 99736 29 100.0 32 ............................. ACTTTGCCGACGTCTTGGATTTTCTGCACGTC 99675 29 100.0 32 ............................. TCCCTCATTACACCCACGTCGCCCCAGCCCTC 99614 29 100.0 32 ............................. ACTTTGCCGACGTCTTGGATTTTCTGCACGTC 99553 29 100.0 32 ............................. TCCCTCATTACACCCACGTCGCCCCAGCCCTC 99492 29 100.0 32 ............................. TCCCTCATTACACCCACGTCGCCCCAGCCCTC 99431 29 100.0 32 ............................. TTTGATGTCCCACCGGGTGGTGCCGGTGCCTC 99370 29 100.0 32 ............................. CCCTCGCCCTGCGCCTCGCCGAGCTCGTCGTC 99309 29 100.0 32 ............................. ACCTGGGAAGGCGGCAATCGCCGCGCGCCTAG 99248 29 96.6 0 .........................C... | ========== ====== ====== ====== ============================= ================================ ================== 15 29 99.8 32 GTTCTCCCCGCGCAGGCGGGGGTGGTCCG # Left flank : GCGTCGTCCTCGCCGTACTCCGACGCCTCCGCGAGCAGCGTCTGATAGCAGTCTCCAACCAGCGCCTGGAATGACGGCGATACCTTGCCTATATCGTGCAGGCCCGCCCAGAAGCACACGAAATTTCTCATGCGGGCACCAACATGCTCACCGAGCACATCCACAGACAGGACGTTCAGCCCGACGGCCCACGCGTCCCAGAGCGCCCCGGCAATCGCCGCCGTGTCGATGAGATGGCAGACCACCGGATAAGGCCCCGGCAGCTTGTCGCGCTTCCCCCACAAACGCGCGTCAACCGACCACAGAGACTCTCCACCAAGATTCTCTACAGGCATAGGCTCGGCTCCACACATCGCGACTCGGCCTTCGAGGCAACTGCACCACACACCACCGACAAAATCGCACGAGCGCGTAAGCTCTCCCCATGCCAAGCCAGCCACCGCCCCAGCCCCCAAGGTCACAAATCAGCAACGCCCCCCTTTAAGCCCAGGTCAGCAAGT # Right flank : GCCAACGGGATCGTGAGTGCTTTGGGCGAGATGTTCTTATGTGTTCCAGTACGACTTCGACGCCTGATCTGAGGGCGTGAAGCGACGCAACGACCGGGGTGACCTGCTGCCCGCCCCCTCTGCCTAGGCGCTGGCAAGTCGCTGGACTGGAGGTTGAAGTAGCTTCAGGCAAGGTGCCGTTCGATGTCGTGCACCAGGTCGCGGACTGCGGTGGTGCGCGGCGCGTGCGGCACCAGGTCGTCGCGGAGGTCGCCGAGTAGGGCCACGCACTGCGCCGACGTCACCGACAGCAGCCGCCGCAGCGCGGATCGGCCCGCTGCGACGGCCTCGTCCAGGTCGCCGGCGCGGGTGTGGGCGAGGCTGAGCCAGATGCCGTGCCGCAGCGCCGACCGCTGGTTCGCTCGGTGTGACATGGCTCGCCCACCCCGGCGGCTGCTCGCCCTCTTCGGCCGCCCTGGTGATGAGCTCCATGGCGCCGTCACGGGATCGATGGAAGCCAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTCCCCGCGCAGGCGGGGGTGGTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCTCCCCGCGCAGGCGGGGGTGGTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-11.90,-13.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 109721-110176 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNCN01000011.1 Sinosporangium album strain CPCC 201354, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 109721 29 100.0 32 ............................. CAGTACCACAAGCAACCCGCCAACATCCTCTA 109782 29 100.0 32 ............................. GTAGGGCCGCGTGAGCTTGTTCCATCGGCGTG 109843 29 100.0 32 ............................. CGGTGGCCCGAGGATTCGGCCAACAAGGCGAG 109904 29 100.0 32 ............................. AGGCGGTTGAATGGTGCGTCGGGCGACAGCGC 109965 29 100.0 32 ............................. GAATTTACGGCCCGGAGGGCGCGGTGGATGAA 110026 29 100.0 32 ............................. CAATCCACCGTGGACTCCCCGCGCCAAGAGCG 110087 29 100.0 32 ............................. CCAGGGACTGATCGACAGGCGCTCGACCGCGT 110148 29 89.7 0 ...................A......TT. | ========== ====== ====== ====== ============================= ================================ ================== 8 29 98.7 32 GTTTTCCCCGCGCAGGCGGGGGTGGTCCG # Left flank : CTTTCGTCTCCTCCCACGCATCGTCGCCGACATCCAAACCCTCCTGGACCCCGACGACGGCACCCGCCGGGAAGACGCCGAAGAAGCCGCAGAGGAACTTGTCGACCTCTGGGACCCGGACTTCGGCCGCCTGGCCGGCGGCACCAACTACGGGCACGACTGACATGGCCTCCATGACCGTCATCGCCACCACAGCCATTCCCGACCACCTACGCGGAGCCCTCACCCGCTGGATGATCGAACCCATGCCAGGGCTCTACGTCGGCACTCTCTCCGCCCGAGTCCGCACCGAACTCTGGGCCGCCGTCGCCGCTTCCGTCGGCGACGGCGCTGCCGTACTCCTCCACCCCGACGCCAACGAACAGGGGTTCACCCTCCACACCGCAGGTCATCGCCGCCGCACTCCCATAGACCTCGACGGCCTGACCCTCATCGCCCTCAACCCAGCCGAGCCAGATAACGAATCAGTAAACCCCTGACATCGCCCCAGGTCAGTAAGT # Right flank : GAGCAGCGCGTCTCCGAGGATGACGTAGCCGGGGTTCCGACGAGCAGGAGTCCGCTGGCCGCGGCGGGGCCTCTGATGGAGGCGACGCTGCGGTTGAGCGTGACGAGCGCTGTAGCGTTGCGGATCCGCTCGGCGGGCACGAGGTCCGGCACCACGCCTGTGTTGGTGGGGGAGGAGAAAGGCATGGTGTTCCGGCTTTGAGGGAAGCGTGGGCGGGGGGCGGTCGCCGTTCAGGGTTGCTTTCGCTGGTGTGCGGCGGCCGGCGGTTTGGGGGACCGGCGGTGGCGATTCGTACCCTGCCGGTAGTGGCGTTGTTGGCATGCGCGTGAGCAGTATTTGCGGCGTCGGCCGCGTGCTCGTTGGGTGAAGGGTTTCGTGCAGACGGTGCAGCGGTCCGGCGTTGGGGCTTTTTCGTCACGCTGGGAGTCTGTTTCGTCACGCTTCTGGTGGGTTGCTCCCCGAGGGGGGATCGATTGCGCTGCGGTGACGAGACTCTGGGC # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCCCCGCGCAGGCGGGGGTGGTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCTCCCCGCGCAGGCGGGGGTGGTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.90,-11.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 1214-880 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNCN01000019.1 Sinosporangium album strain CPCC 201354, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1213 29 100.0 32 ............................. TCGAACAGGGTGGTGAGCCGCATCCGGCCGTC 1152 29 96.6 7 ............................G CCGGATC Deletion [1117] 1115 28 65.5 0 TC.GC.......T..T..C..T....G.- - G [1091] Deletion [1088] 1087 25 82.8 32 ----....................C.... CATCCCATGTCCCGAACTCAAGATCGAAAGAA 1030 29 96.6 32 ............................G CGGTAGATCTTGCGAGGGTCCTGCGGGATGTT 969 29 100.0 32 ............................. GCGGTCCACACGTGAGCGGGGTTCGGACGCTC 908 29 96.6 0 ...T......................... | ========== ====== ====== ====== ============================= ================================ ================== 7 29 91.2 23 GTGCTCCCCGCGCACGCGGGGATGGTCCC # Left flank : CCATCCTGATCGACCCGGCCCACGACTTCGGCAAGAACACCTGGCACTCCCTTGAGGTCAGCCGCCGCCTCACCGAAATGACCGCCACCGGCTGGCCCGTCCTCGTCGCCGTCTCCAACAAGGACTTCGTCGGCGAAACCCTCGGCGGCCTCCCCGTGGACCAACGCCACGCCGGCACCATGGCAACCCTCGCCATCTCCGCCTGGCAAGGCGCCCGCGTCTTCCGCGTCCACGACGCCGCCTCCGCCCGCCAAGCCCTGGCCACCGTCACCCACCTCCGCCGACACCCTTGACCACCCCGGCCCCCGGGCTCCTCTCCCCAGCCGCGTCCGGCGCCGCCCGACGCGCGCACTGCGTCCTCCCCTTGGAGGCTTGCGGATCGCAAAGTGTCCGGGCACCCTAACGTGGTGAGCTCGAACCACCCCCTGGTCGAATTGTCCGATTCCAAGGAAGTGCTCAAAAACGGCTGCCCACGCCGATAAACCAGCAGGTCATTAAGG # Right flank : CCAAGTCCTCTTCTTCCCAAAGCCCCTCAGAGGTGCTTCCCGGGCACGGGGCCGGCGTGGTGGGTCGGGGTGGGGGCGGGAGCCGTACGGGGGTGTTTGGGGAGGCGGACGACGGCATGGAGGCCGGGGGCGGCGTTTTCGAGGTGGACGCTGCCGCCGTGGGCGAGGACGGTTTCGCGGACGATGGCGAGGCCGAGGCCGGCTCCGCCGCTGTCGCGGCTGCGGGCGGTGTCGAGGCGGGTGAAGCGGTCGAAGACGCGTTCGCGGTCGGCGAGGGGGATGCCGGGGCCGTCGTCGGTGACGGTGACGACGATGTCGGGGCCGTCGGGGCGGGCGGACAGGTGTACGGCGGAGGCGGCGTGGCGTACGGCGTTGTCGACGAGGTTGGTGAGGACGCGGTCGAGGTCGGAGGCGTCGCCGGTGACGGCGAGGGCGGGGTCGCGAGACGCGGGGGAGCCGGGCGCGTGGGGGCCGGTCGTGGGGCCGGGTGTGGGGGCGGC # Questionable array : NO Score: 4.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.56, 5:0, 6:0.25, 7:-0.95, 8:0.8, 9:0.56, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCACGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.40,-0.70] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.77 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 9973-10735 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNCN01000066.1 Sinosporangium album strain CPCC 201354, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 9973 37 100.0 35 ..................................... TGTGCGCGGGCCTGTGCGAGGCCCGCACATCTGCG 10045 37 100.0 37 ..................................... GTCCCCACGGGGGCGGGCTCCCCGCGCACGTGGGGAT 10119 37 100.0 37 ..................................... GCTTTCGTGGTGAGGTCGAGCCGACGGAGACGGTCAT 10193 37 100.0 34 ..................................... GCGAGCTCTACGACGTCCTCCAGCCGTACATGAA 10264 37 100.0 38 ..................................... CCGGGGCATCCGGCTGTGAGGGTGCTGGATCCGGGCTG 10339 37 97.3 35 ..............................C...... CCCGCGACCCGGCACCGACGACGCCCCGCATCTGG 10411 37 100.0 33 ..................................... CACCGAGTACTTCGCGCTGAAGCGCCACGGCAA 10481 37 100.0 37 ..................................... CGCGTCCCTGTGCCTCCCCACGCAGGCCGACCTGAGC 10555 37 100.0 35 ..................................... GTGTGTCCGACACCCGGCAAGAGGGGGCCACGCAT 10627 37 100.0 38 ..................................... GGGGGGTGACGGGCAAGCCTGCCAAGCCTGCCAAGAAG 10702 34 91.9 0 ..................................--- | ========== ====== ====== ====== ===================================== ====================================== ================== 11 37 99.0 36 GTTTCGATGCTCACCGGCCGCGAAGGGCCGGTGCAGG # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTAGGCGGATTC # Right flank : | # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCGATGCTCACCGGCCGCGAAGGGCCGGTGCAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-15.00,-13.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [8.3-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //