Array 1 501026-501233 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB849799.1 Acinetobacter haemolyticus CIP 64.3 = MTCC 9819 strain CIP 64.3 acLrj-supercont1.10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 501026 28 100.0 32 ............................ CAACACATACTCATCAAGAATTACTTTTAATT 501086 28 100.0 32 ............................ AGTACCCGAACAACACACGATCACATTATCGG 501146 28 100.0 32 ............................ TAACTTTGTAGCTGTATCTGTAGCCATTGTTG 501206 28 85.7 0 ........A.............C.T..T | ========== ====== ====== ====== ============================ ================================ ================== 4 28 96.4 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : GGTAAATGCGATTTGTCTTTGTAGATTACTCACCTCAATTGTATCTGCATCCACGATCGTTATTTTGCCTACACCTGCACGAGCAAGTAACTCTGCACTTGTACAGCCGATCCCTCCAGCACCAACAATCAGTACATTTGCCAATTTTAATTTTTCTTGTGCTTCAATATCCCAACCATCTAATAAAATCTGACGACTATATAAATGCATTTCGTCATCAGTTAATTCAAAAGTATGTTCTAGATGATCAGACACGTTCCATGATCTCAAAATCGGCTTAACGAATGCTGATTTTAAGTGGCTAATCTCATTTAGCAAAGCATTTAATGCTTGCTGCATCATTTATTTTGACAAATCAACGGATTTACCCCAATATTTTTATTACTCTTTAACAGCTTAATAAAATCAATACCTTATGAATCAGCATAAAAACTTTGGGTGTTGAAGTATTTTTCAACCCAAGCTAATGTTTTTTCTTAATTTATTTATGCTATTTTATT # Right flank : TACAATCAAAAACAACCCACAGTACCTAGTGAAATTAATGACTTATATCGCTTTTAAATAAACAATTTGTTAAATTATATAAATAGAATATAAGAGATTTATCATGGAAAAAACTCTATTAAAGTTCATCTGTCTTATAACATTGTTAGTTTCAACAAATCCAAATATATATGCAAATGTTTACATACCAATTCCCTCATTAAAAAAGCCTAAAATATCTCCGCATATTAAAGCTCAAGCACTCAAAACGGATGAGTTTGATGTATCTACCAAACAATTATTAGAAAAAGGCTATATTCCTATTAAATCCCAAACATTTAATGGTAGAGATGATTTTAGAGGTTATGAGCACGTTGTAGCAGCGCTAGAAAAAAGAGCTGATCAAATGGGAGCTCAAATTGTACTATTTACTAATGAGAAGCCAACAGGAAGTGTAGATTATTATAGTTTCACCACTCCCTTTCCTCAAAAATCAACAATACAATCTAACTTTGATAATT # Questionable array : NO Score: 5.68 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 387432-388842 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB849800.1 Acinetobacter haemolyticus CIP 64.3 = MTCC 9819 strain CIP 64.3 acLrj-supercont1.11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================================================================== ================== 387432 30 93.3 30 ............................AA GATTAGAATAAGCATCAAGCCGACTAATGA 387492 30 96.7 30 .............................C AAGTAATAACTTAACACCCTCAACAGCTGC 387552 30 100.0 30 .............................. CTCGTCATGAAGGTTTTGGAGAAATGCTTT 387612 30 93.3 30 ............................AG AAAGCGTGGACTCCCCGAAAGTCGAATTTT 387672 30 96.7 30 .............................C TTAGGGCATCAAATAAGCTATGAGTTGCTT 387732 30 93.3 31 ............................GA ACGATCCAAACAATAACAATCCTAACAATCC 387793 30 96.7 30 .............................G CACCAATTGCACCTGCACCGATTGCTGTGT 387853 30 93.3 30 ............................AC CATATATGCCTAAAGAGCATTTACACCTAG 387913 30 93.3 30 ............................AA TCAAAAATCTATGATCAATGCACCAGTCGG 387973 30 86.7 90 ..........................NNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATACGCCATTTAGAAATTCATTCGATCTAATATCGGGTCAAAAGCTAC 388093 30 100.0 30 .............................. GAGGAGTCTGTCTCCAGTCACAATCTTTCG 388153 30 100.0 30 .............................. TCGACGGAGTTAGAAGTTAAATTTCTTAAA 388213 30 93.3 30 ............................GA CAGAAAGAAATCGCGAATTAATTTCTGGAT 388273 30 93.3 30 ............................GC GAGTTTATTAACCGCGATGAAGCTGGCCGA 388333 30 96.7 30 .............................G TTTAATGCGGGTCTCTTGCCAGTTTAGCGG 388393 30 96.7 30 ............................A. CATCAATAGGAGATTTTAAAATGGCTAATA 388453 30 93.3 30 ............................AC AGATACGCACCAACTTTGAAAAAGTTTGCT 388513 30 96.7 30 ............................G. TAATTTATTAGATCAGCAACTAAAACAAGA 388573 30 96.7 30 T............................. AACTACACGTTCAGTCATGGCAGCCACCTA 388633 30 96.7 30 ............................A. TACCATCACTGCCACCAGTGCCGTTGCCGA 388693 30 100.0 30 .............................. TGAACGACAAATAGAAATCTTTCATGTGAT 388753 30 90.0 30 ........................T...CA TCATAATGACAGAAGGCGAGTCACGGCGAG 388813 30 83.3 0 ........T.A.............A.T.G. | ========== ====== ====== ====== ============================== ========================================================================================== ================== 23 30 94.8 33 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GTCAGTGGCTAGAACGATTGATGGATTATGTGCACATCATTCAGCCGCGTGAAGTGCCGCAAGCCAAGGTTACTGGTCATGCACACTATTATCGAGTCAATCCGAAGATGAGTATAGAGGAACGCATTGCTCATCAAGCACAGCGTCATAATATTCCTTTGGCTGAAGCTAAGCAGCATTTTAAACAATATGTTGAGCAACCTGTGGTTGAGCCTTATGTTAGTTTAAAAAGTCTGAGTGCTAAACGTGAGGAAAATATAGATCGACCGTATCGCTTATATATTGGTAAGTCTGTTGCTGATGAGGCGAAAGATGGGAAATTTGGAACGTATGGGCTAAGTCGAATGGCAACAGTTCCAGAATTTTGACCCAATATTTTTTTTATTCTTTAACAGCTTAATAAAATCAATAAGTTACAATAAGTCGTTTTTTGATTGGGTAAATTGCTAAAACCTATGATAAGTACTTGTTGTAACTCATATTTTTACTATAATTTTATA # Right flank : TGTAAATGGTTATTCCTAATACATTCAGGCACTTTAATTTTTAAATAAGAAAATATACCCTGAACCTAATATATTTTTAGTGAATTTTTCATGCGCGGTCTTTATCTCATCACCAATGATGATCCCATCCAATTATTACTTGAAAAATTAGAAGTTGCTTTAGCGACGAGAAAGGTTGCGATTTTGCAATATCGCCGTAAGAAAGTGGCAAAGGCAGATCAACCACGTGAAGTTGAACAGATCAAAACATTGTGTGAAAAGTACCAAGTACCTTTTGTCATCAATGATGATTTGGCTTTAGCTGAACAATTTGGATTAGGTGTCCATTTGGGGCAGTCTGATGGGGAAATAAGCGATGCTGCTGCACGTTTGCCGCAAGGTGTGATTATTGGTCGTACATGCTTAAATTCACTCGAATTAGCTGAAAAAGCAATTGCTGATGGGGCGACTTATGTTGCTTTTGGTGCAGTCTATGCCACCTCAACTAAACCTGAAGCAGG # Questionable array : NO Score: 5.10 # Score Detail : 1:0, 2:3, 3:0, 4:0.74, 5:0, 6:0.25, 7:-0.19, 8:1, 9:0.30, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //