Array 1 17105-21181 **** Predicted by CRISPRDetect 2.4 *** >NZ_QPFS01000091.1 Rhodopseudomonas sp. WA056 NODE_91_length_21412_cov_3.63754_ID_6000, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 17105 32 100.0 35 ................................ AGATGGTCGCATTTGCGGTCCCCCCGACAGGCGGA 17172 32 100.0 33 ................................ CGCGGAGATAGGCACCGGAAACGAAATCCGGAC 17237 32 100.0 33 ................................ AGCAAGGGTTGCCGTCAGCCGGCTCGAAAACCG 17302 32 100.0 34 ................................ AGCGAAGCGTGGGATACGGCATGAACAGCGACTT 17368 32 100.0 37 ................................ AAACTATGACTAGCTTGCCGCCCGACGAACAGCGCGC 17437 32 100.0 33 ................................ GGCCTGCCGCCTGGCGAGTTCTGGCGCGCGACG 17502 32 100.0 35 ................................ GGTGCCGGTGATGGTGTCTCCGGGCGAGACGATCG 17569 32 100.0 35 ................................ TTTATCGCGTGGCGGCCGCAGAGCTATCCGCGCGA 17636 32 100.0 34 ................................ CCCGGCGGCGGCAGTGGCGTGGAGGCAGTCACTT 17702 32 100.0 33 ................................ CTCGACGTCGCTGTTGATCGTGTGGAAGGACCT 17767 32 100.0 34 ................................ CACCGAGCCCGCAACGCCCGTCTGTCAGAAGCCG 17833 32 100.0 34 ................................ GCCAAGGCCGAGGAAATGCGCGCCAGTTACTACG 17899 32 100.0 35 ................................ AAGGCGCCCGCAAGCGATCTCGAAATAGGTCGGGT 17966 32 100.0 36 ................................ TCGCCTCGGACATCCAGCGCGCGCTGGGTGGCTACG 18034 32 100.0 35 ................................ GTGGCATCGGCCGTGATGCCGAGCCGGGTCATGCG 18101 32 100.0 33 ................................ GGCTTGATCGGCGCACTGCTGCCATCCAACGCG 18166 32 100.0 35 ................................ TCGCCGCGGTGCTCGCGCTCGCGTGCATCGCCGCT 18233 32 100.0 35 ................................ CGCTGAAGGTGCTGCCGCCCACAACCAGCCAAAAC 18300 32 100.0 35 ................................ ATTGCCAAGACGGTTCAGATCCCGAACGGACCAAA 18367 32 100.0 34 ................................ GGCATCGAAAGCATGTCGCGGCGGCGCGACGCGA 18433 32 100.0 35 ................................ CTAGTCAACCGGGTAAGCTCTGCGGAACGTCCCTA 18500 32 100.0 34 ................................ ACCAGCCGCTCGGCGCGGGTGCCGTCGAGCTGGC 18566 32 100.0 35 ................................ GCCGCGGGCGGCCGTCTGGTCAACTGCTATCCGGA 18633 32 100.0 33 ................................ GCGCCATGCTGTCGCCCTGGGTCTCGAGGATCT 18698 32 100.0 34 ................................ ATTCGCCCTGACGCGGTCCCAGCCAGATTGAATC 18764 32 100.0 35 ................................ CTTGGACGCAACTATTCCGGCTGGGTCTGCGAGCC 18831 32 100.0 34 ................................ CATCAACAGCACTGGAGCATCATCATGACTTGGC 18897 32 100.0 35 ................................ AAAGCCTCGGCAAACGACCCGGAACGCCTCTCCAG 18964 32 100.0 34 ................................ CTCGTCGCTGTGTGCTCAACGGCACGATCAATCC 19030 32 100.0 33 ................................ GTTCCAACTTCATCAGCCATGATAAGTCTCCTT 19095 32 100.0 34 ................................ ATTCAACAGGGCTTTCGGAGTGTGTGCGATGAGC 19161 32 100.0 34 ................................ ATCGGAAAGGCCCGCGCCGGCCGCCTGCTCGACG 19227 32 100.0 34 ................................ ATCGCTCCGGTGTTGCCGGGGGAGACGATGAAAA 19293 32 100.0 34 ................................ GCCGCGGCGGCTGCATCAGGTGTGCCGGCCGCGG 19359 32 100.0 33 ................................ CTCCGACTATCGGATCGACGATGAGCACCACAA 19424 32 100.0 34 ................................ GAGCTACCCTTGCCCGCATTGCACACATCACATG 19490 32 100.0 35 ................................ CTCAAATGCCTCGTGGTCAAGAACACCCTCGGCCT 19557 32 100.0 34 ................................ TTTGGACGCGCGCGTGCCGAGCACGGCCACAGTC 19623 32 100.0 35 ................................ GTCGAAGCCGTCACCCTGGTCGACGAAACCGGGCT 19690 32 100.0 35 ................................ TGGTCGTAGGGACGCTGGCCGCGGACCGCATATTG 19757 32 100.0 35 ................................ GTGCTGCTGGTCGGCGCCGTTAAGGCAAGCTCGGC 19824 32 100.0 34 ................................ ATGCTCGCCGCCGGGCCGGTGAACTGCATATAGG 19890 32 100.0 34 ................................ ACGAATTGATCGCCGTACATGAAGAGATCACGGA 19956 32 100.0 35 ................................ CCGACACGTCGCCGTGAGTTGTCGACGCTCCGGCG 20023 32 100.0 35 ................................ ACTCACGGCCGCACCCCTTTTGAGCACTCACGGCC 20090 32 100.0 34 ................................ GGTGCCGGCTTCAGCCTGGCGCGGTTGGATGGAT 20156 32 100.0 35 ................................ TCGTGTTCGCTCATTCCGCCGCTCCTGACCAGTTG 20223 32 100.0 35 ................................ CAATGATCACGCTGGCACTTTTTGTATAACCAGCG 20290 32 100.0 35 ................................ CTCGCCGCCCTCGGCGACCTCGTCCCCGCCGCCAA 20357 32 100.0 34 ................................ CTCGATTGCGCCGGCCGCGAGGTGGTGAACGCGC 20423 32 100.0 34 ................................ TCGTCGCTGACGGCGACGGCCGCATGGGCGTCGC 20489 32 100.0 34 ................................ TCGATCGCCGCCGCGGCGAGCGCCTGGCGGTCGG 20555 32 100.0 34 ................................ GTTCAAACTGGTTGAGGACGAGCGTGCGGCAGCA 20621 32 100.0 34 ................................ ACACCGCCGACGCTCCGCGCCGCCTGTGTCGTCG 20687 32 100.0 34 ................................ CTCAGTGCCTTCTGCGCCTCAGCCATCGCCTTGA 20753 32 100.0 34 ................................ TTGCCGTCGATCACGCGGATCGGCCGGGTGCGCG 20819 32 100.0 34 ................................ TTCGACAGCAGACCGAGGCTCTTGCCGAGCGCCT 20885 32 100.0 34 ................................ GCTCACGGCCGCACGCCTTTGAGCAGGTGCCGCT 20951 32 100.0 34 ................................ AGATATCGGTCGTAGGCATCGCTCTTGGTCTGCG 21017 32 100.0 33 ................................ TTCGGTAGCTTCTTGCTCATCGCTGCTGCCCGC 21082 32 100.0 37 ................................ GAGCTATATTCTCCCGCGCGCTCGGCGACGTGCTCCG 21151 31 75.0 0 ............C........-C.C...CGCG | ========== ====== ====== ====== ================================ ===================================== ================== 62 32 99.6 34 GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC # Left flank : TCGCGCGTATGATCGACAGGTGCCGCGATGCTCGTGCTCGTGACTTACGACGTTCGAACCAGTGAGCCCGGCGGTCAGGCGCGGTTGCGGCGCGTCGCCCGGGCCTGCCAGGACTATGGACAGCGTGTGCAATATTCGGTGTTCGAGATCGAAGTCGACCCGGCGCAATGGACAGCGCTGCGCGCGCGGCTCGAAAGCCTGATCGCGCCGAAGCACGACAGCCTGCGCTATTATTATCTGGGCGCCAACTGGCGCCGCCGCGTCGAGCACGTCGGCGCCAAGCCGGCGACCGATTTCGGCGAGCCGCTGATCGTCTGACAGCACGCGCGAACCACCAGCACACACGCCGCCCCCGGAACCTTCGCGCCGGCACAAGCCTCTGACGCACAAGTCGGTTTTCGTCCCCCGTCGTGCTTTCCCCGCAATCCCTCCCCGCCTCCTCTGAGGTTCGCGCCGGCCAGCTCACTTTGCTTGCAGCGATAATCAGTTATGGTCTGGCC # Right flank : CGGCGGCAATGACACATCGACTGCTTGACAAGAGCGACGCCCAGAGCACTACATATTGTATTCGCGGTCTCTCGAATCCTTTGATCGAGGGCTAAGAGGGAATCCGGTGCGGCGTTACCGCCTGAGCCGGAGCTGCCCCCGCAACTGTCAGCGGCGAGCCGACGTCATCAGGCCACTGGGAGCAATCCTGGGAAGGCGGACTGAGGCAATGACCCGCAAGCCAGGAGACCT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.20,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //