Array 1 119349-118565 **** Predicted by CRISPRDetect 2.4 *** >NZ_DF967971.1 Bellilinea caldifistulae strain GOMI-1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 119348 36 100.0 36 .................................... CTCGCGGATTGCTCCAATCACAGACTTCATTGAACA 119276 36 100.0 39 .................................... GGAGCGCCCCCGACCGACTGTGCTGCGGCCGATTCCGGA 119201 36 100.0 41 .................................... GGAATAACAGTAGTACGGATAACAAGAAGGTTGTTTCGATT 119124 36 97.2 38 ....................A............... CCTGATATAGTCTGTTGAAACGTTCTTCTCCGAATATC 119050 36 100.0 41 .................................... GGACAGCCTTTCAACGGGGGGAGGAGAGGTATCTTAACAAG 118973 36 94.4 42 ........A.......A................... TGACGAATGCGATTAACGCAAAAAAAGCGATAACCCAGTTTG 118895 36 100.0 35 .................................... GTATCCTGGTTCTGTCTCCGTGTGTCTTACCCTGA 118824 36 100.0 38 .................................... CTACCAGTGTTTTGTGGAGCAATAAATCTGCTGACTCC 118750 36 100.0 38 .................................... CTTTGCAAAATCATCAAGTATTTCGTATTCAGCCATAA 118676 36 100.0 40 .................................... GCATTGATTGTTAGGTCAGGGGGTAAAACAATTTTGCTCA 118600 36 97.2 0 ....................A............... | ========== ====== ====== ====== ==================================== ========================================== ================== 11 36 99.0 39 GTCCGAATCAACAAATGCCCGTAAGGGCATTAAGAC # Left flank : GCGGGATGTGACCGGCGGTTTTCGCCTGTGGCGGCGCGAGACGCTCAAACGCATGCCGCTCGAACGGGTGCGTTCGAACGGCTACATCTTTCAGGTGGAGATGATTTACGCCGCCCATCTGCTCGGCTTCCGCGCCCGCGAGATTCCGATTCACTTTGCCGACCGGCGCTGGGGGCAGTCGAAGATGTCCTTGCGGATTCAGGTGGAAGCCGCCTACCGGACGTGGCTGCTGCTGTGGCTGTACCGTGACCTGCGCCAGAAGCGTCCGCTGGCCAGCCCGTGAGGGGAGTAATTGCGCATAGATTATGTGTACCCCCTCTCCATTCCACCGAAAAAATACCAATTTCAGGAGGGGGGTACGCAACAAAGATTAAAATTGTACGGAAAGGGAAATTTTTTGCCAGAAATGGTTGATTTTTAGCGCAGAAAATGATAGTATGGTGGCATACGGTTCGGATAAGTATCGGAAAAATTCCGAAAAAAGCAGGAGCGAGTCAGCA # Right flank : CGAGGTCGAGTTTTGCTACACCATAGCCCACACCGGCAACAATATCATCGTGGATAAACTGGCGCGCGAACAATCGGGCGCCCGATTTCCGATCGGAAATGGAGGCCGCAAATGACGGAAAACAACCCCTACATCTCCCAGGAAATAATGGACTATTACTTCAAACAGTACGGCTTGTTTCTCCACAAATATGAGAACAGGCTCATTGAGCTTAGGGAACAATTGTCCAACTACCAGTTCATTTTTGCGATGCAGTGGTCTGGCAGGGGCTCGCCAACCATTGATGCAAGAATGATGTGGCCGCAATATTCACGCCTTCTCACCGAATATCACTCCCTGGCGTGCTTATACAACAATTTGCTGGATCGAATCTATCCAAAACAAAGTGAAGTTCCTGCGGAAAAGGAAACAGAAGAGCAAGAACAAAATACACCAGAAGAAGGAGGTACTGAAAATGAAGGAGATTTCATCGACCGACTTATACGAGGTCTTCATCGCCT # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGAATCAACAAATGCCCGTAAGGGCATTAAGAC # Alternate repeat : GTCCGAATCAACAAATGCCCATAAGGGCATTAAGAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.90,-11.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 2 317192-316632 **** Predicted by CRISPRDetect 2.4 *** >NZ_DF967971.1 Bellilinea caldifistulae strain GOMI-1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 317191 36 97.2 41 .................................A.. CTACCATATAAATAACTAATGCCCCGACCAGTATCTCGAAG 317114 36 100.0 41 .................................... ATAAAGGTGCAAGCAATTGTTCATTGCCTCGCAATAGTAAA 317037 36 100.0 39 .................................... GGGATATAAAATCTTATACCCCTTCCATTCTGCCCGTTT 316962 36 100.0 36 .................................... ACCAAAGTCGCCTTGTCTTTGAACGGCACGATGTAA 316890 36 100.0 41 .................................... TTCATCACATCCTCGATATACCCCATCACTTTATCCATTCT 316813 36 100.0 35 .................................... TGTTCTTGCGCTTATTATCGCAAGGGCTCACCCCT 316742 36 100.0 39 .................................... GCTAACTCTTGACGGAAAACATAGCCGTTCAGTTTCCTC 316667 36 80.6 0 ............C...............T..CGCCT | ========== ====== ====== ====== ==================================== ========================================= ================== 8 36 97.2 39 GTCCGAATCAATAAATGCCCGTAAGGGCATTAAGAC # Left flank : CCCGCTGGATGACGAGGATTTTTACGAGGGCTACCGCGAACGGCTGGAAAGCAAACTGCGCCACAAGCAGACCCAGATCAGCCGCACGGAACGGCTGCTGAACACCCTGCCGCCGGCGCAAAAGCCGGCCTTTGAGGCGCTGCTGGCGCAGGCGGTTGCCGACCGCAACGAGATTCAGGCCGAACTTGACCAGTTGTTGAAAACGCTGGAGGAGTTTAAGAGGCGCCAGCAGCCGCCGGTGCAGCCCGATGCGGGCGGGAGCGGGTGAGGGGAGCGTGCATGGGGGCAAGCATTGCGCATAGATTATGCGTACCCCCCTCCTGAAATCGGTATTTTTTTGGTGGAACCGGCAGGGGGGTACGCAGCAAAGATTAAAATTGTACGCAAAGGCAAATTTTTTGCCAGAAACGGTTGATTTTTGGTGAAGAAAATGATAGAATGATGACAGTAATTTGGACTGATGAGAAAAAACATTGGAGAAAAGCAGGTACGAGTCAGCA # Right flank : GTTTCCGCACCCCTCCCGCTCAACCGGCAGCGCGGCGCAACTCCCCTTCCCCTCCGCCCTAAAACCGACCGCAAGCCAGCCCGCTCTTGTGTTAGAATCGAACGCGTATGGCACAACCGCGTTTGATTCTGGCTTCCAACTCGCCCCGCCGCAGCCAGCTGCTGGCGTGGAGCGGCTGGGCGTTTGAACTCGACCCCGCCAATCTCAACGAAGACCCCCTGCCCGGCGAGCCGCCGGCGGAGTACGTCCTGCGCCTTGCCGGTGAAAAAGCCCGCGCCGTTGCCGTCCGCTACACCGGCGAGCCGGCAGTGGTGCTGGCCGCCGATACCACCGTCGCCGACGGCGGCAGCATCCTCGGCAAGCCGGCTGACGCCGCCGAGGCGCGCGCCATGCTGCGCCGCCTGCGCGGCCGCACCCATCAGGTCTATACCGCCGTGGCGCTGATGGACGTTTGGCGCGCCCTGCTGGTGCAGGATGTCTGCATTTCCCACGTTCCCATG # Questionable array : NO Score: 3.12 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGAATCAATAAATGCCCGTAAGGGCATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.90,-11.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 3 1503622-1495236 **** Predicted by CRISPRDetect 2.4 *** >NZ_DF967971.1 Bellilinea caldifistulae strain GOMI-1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 1503621 33 100.0 37 ................................. ATTGAAGCGTTGGAACAAGCAGAGGAAACTAGCCATG 1503551 33 100.0 34 ................................. GCCTCTGGTGCGGAATTATCGAGATTGATGACAG 1503484 33 100.0 34 ................................. TCGGTGGGAGGGTATTTGTAGACTTTGCTCCTCC 1503417 33 100.0 33 ................................. ACTGAGTGGCTCGGCCATTGGTCAACCGCTGGA 1503351 33 100.0 36 ................................. AGGTGGTTGGCGAATTTGAGCGCATGTCTGCGACTC 1503282 33 100.0 36 ................................. TCCTCAAAGACCTTGGACGGAGACCGGATGCCCAAG 1503213 33 100.0 34 ................................. TACATGGCTGATACTCAAGCGGAGTTGGACGCGG 1503146 33 100.0 35 ................................. TCAATATATTTGTGACAAAAATAGAGATATTGTCA 1503078 33 100.0 36 ................................. GGGGTGACGAAGGGCGGAACAGGGTAAATCTGTAAC 1503009 33 100.0 34 ................................. TTACATGTCCGCTAGATGCGGACGGTTTCGTAGC 1502942 33 100.0 34 ................................. AAAGAACAATCACTTTGAACCCGAACGGTGCTTT 1502875 33 100.0 36 ................................. CAGGCTGCGAGCCGGTCGCGCCAACTGTCTTGGCGC 1502806 33 100.0 34 ................................. ACGTGTTCTAGCCATGGTTTTACCTCTTTTGGAT 1502739 33 100.0 37 ................................. TCAACGAGAGTAGCGGTGTCGCTTTCCGCCAGCGATC 1502669 33 100.0 35 ................................. CAGGCTGCGAGCCGGTCGCGCCAACTGTCTTGGCG 1502601 33 100.0 35 ................................. TCAGCTGTAGTTGCGACTACCGTTAGGTTTTCCGG 1502533 33 100.0 34 ................................. TACTCTAGCGTGCTTCCTACCTATATGCCTCCGG 1502466 33 100.0 35 ................................. AATAATTATATGGTTGAAAGTGTTTACGGTTATTT 1502398 33 100.0 36 ................................. TTGGAGCAAACCGACCCAGCCATAAGAGCCGCTCAA 1502329 33 100.0 35 ................................. CCAGAAGTAGATTTTGGGATCTCCAACTTTACCTC 1502261 33 100.0 34 ................................. AGAAGTTTCTCTTCAATTCTTTCGATGAACCCCA 1502194 33 100.0 34 ................................. ACTCCATTAGCCGTTGTAAAATTACCGCCAGCGT 1502127 33 100.0 37 ................................. TCGAGGCTTGCAAACGACTTGAAAAGAGGTTGAAATG 1502057 33 100.0 34 ................................. ACTTCTTAAACCGCTTTGCCCACTTGCCCTCTTT 1501990 33 100.0 35 ................................. CGTGCTGTCAAGTACTTTCTGCAACTTTTTAACTT 1501922 33 100.0 34 ................................. AGGTGTGAGCAAATAATTCGCTCAACTTCCATCA 1501855 33 100.0 33 ................................. CATGACGTGGTCGCTCACCGATAAAAATGCACT 1501789 33 100.0 35 ................................. CCAAACGTCAACGCCGATCGTGGTTTTAGATAAGT 1501721 33 100.0 34 ................................. TTGTTCTGCGGTCGTATCCGGTTGTTCGCCTTTG 1501654 33 100.0 33 ................................. ACGAGTAATACCAGCACGGAGGATGCAGGGAAA 1501588 33 100.0 34 ................................. GATTTGCTCTGGCGTAACAACCTCTCCCGTGCTT 1501521 33 100.0 36 ................................. CGGGAAGGAAGGCAAACTCGATTTTATTGGCGGCTT 1501452 33 100.0 35 ................................. GCCTGCCTCCAATTCCCACACACCACCTGCAACGT 1501384 33 100.0 34 ................................. AGACGCTGTGAGGTATGAGATGGCTATCAAACTA 1501317 33 100.0 35 ................................. TGCTTACAACGACCTGGTTGCTGAGAGCCGTGTCG 1501249 33 100.0 35 ................................. TGGGTTCAATAGTACTGTCAGGTCTCTCGCAGTCG 1501181 33 100.0 35 ................................. ATCAATTAATACGATCGTCTCTACAGCCGAATATT 1501113 33 100.0 36 ................................. TGTCACAAATATATTGAAAAGTGTATACTAATAATC 1501044 33 100.0 36 ................................. TGAGGGGATACTACCGGAATCGGAGGAAAGAACGGT 1500975 33 100.0 34 ................................. TGTCGCCCCGCTGCCGGAGGACGGCGAGCGGTGG 1500908 33 100.0 35 ................................. GAGAAAATCAAAGCCGGACTGGTCGGCTCGTCAGA C [1500896] 1500839 33 100.0 35 ................................. GTGTAGAACGGCTCGAACTCAGCGATGTAATGGCG C [1500827] 1500770 33 100.0 37 ................................. TTTGAGAAGAACTTTTGCTACAAGACTTTTGACCGCC C [1500758] 1500699 33 100.0 34 ................................. CTGATGCCCGTGCGCGTACTGTGGAGCGCGCGGG C [1500687] 1500631 33 100.0 35 ................................. TTTCTTGCGTTTGCGTACACGCCCGATGCCGGGCG C [1500619] 1500562 33 100.0 34 ................................. AAACTTTTGCGCGAGATAACTACTGGAAAAGCGA C [1500550] 1500494 33 100.0 34 ................................. TTCTTGCGTTTGCGTACACGCCCGATGCCGGGCG C [1500482] 1500426 33 100.0 33 ................................. CCGGAAGTTGATCTCAACGAGTACTGGGATTAT C [1500414] 1500359 33 100.0 34 ................................. GCCCGTGTCGTGGGGCAGGCGTTCGGCCTGTGCG C [1500347] 1500291 33 100.0 35 ................................. GTCATTGTCATGGCGTTCGTGGTCATCCCGCTGGG C [1500279] 1500222 33 100.0 34 ................................. ACCGCACGCTCACGGTTATCGCCCATCGCCCAAG C [1500210] 1500154 33 100.0 34 ................................. GTCAGAAAAGGAACGCTATGCGTTCCTCATGCCG C [1500142] 1500086 33 100.0 34 ................................. TGAATTACCGGAGGAATTACTGCAAACACGAAGG C [1500074] 1500018 33 100.0 35 ................................. CGTAAACTCGCGGCTGCTCATGCGCGCCAGTCCGG C [1500006] 1499949 33 100.0 36 ................................. GCTCATTGCTTGCGCTCGCGGTAACCTCTGCGCGCG C [1499937] 1499879 33 100.0 36 ................................. TTCCGAAAGTCGCCAGACGGTCGTATCTCGTGCCGG C [1499867] 1499809 33 100.0 35 ................................. GCATTGATGCAGTGTCCATACCTCGATCCGCGACC C [1499797] 1499740 33 100.0 34 ................................. ACGGTAGACCGGGTGGACATCGTTGGTGTGGTCA C [1499728] 1499672 33 100.0 34 ................................. GGTTGCGGGTGGCGTCACAACACGGACGTTCATT C [1499660] 1499604 33 100.0 34 ................................. ACTAGACCCTCCCGCGATAAAACATAGCCCTCGC C [1499592] 1499536 33 100.0 34 ................................. GGATGGATAGATACCCATTGTCGTATTCCAATGC C [1499524] 1499468 33 100.0 33 ................................. ACGTCAAATCAGGAAAGCGAGGCCAGATGCGAT C [1499456] 1499401 33 100.0 33 ................................. GAGCCGCTGGGTCGCGATACGGACAGCCTGGAC C [1499389] 1499334 33 100.0 35 ................................. GGCGATATAAAACGACTTGCGGACATAATCCCAGT C [1499322] 1499265 33 100.0 35 ................................. TGCGCACTGCGTTAATCGTTTTTTTGCGCACGGTT C [1499253] 1499196 33 100.0 36 ................................. CACCCAATGGGTGGTGCATGACGGATATTCGCGGGT C [1499184] 1499126 33 100.0 35 ................................. ATCCTCCTGCTGTGCCGCAGCCAGTAGCAGCGACC C [1499114] 1499057 33 100.0 34 ................................. TGGATCGTCATCTACTGCCTCGTCAATCTCGCGG C [1499045] 1498989 33 100.0 38 ................................. GTAGGAGTCTATCATTGATAAGGCTTCAACGGCGGTTT C [1498977] 1498917 33 100.0 34 ................................. TTCGTAGTACCGCCGCGCGTCATCGTAGATTTTC C [1498905] 1498849 33 100.0 34 ................................. CCCGCCGGATCAACCGCCGCGACCAGGTTGTCCG C [1498837] 1498781 33 100.0 34 ................................. GTCCAAGGCCAGGTTGGTGGCCATCACGGTCAGC C [1498769] 1498713 33 100.0 34 ................................. AATTTGATATTGAATCAGACTTTACCCCCCAAAT C [1498701] 1498645 33 100.0 34 ................................. TACGAAAAGAACATTTAACAATTTCGAGTCATCG C [1498633] 1498577 33 100.0 32 ................................. CCGTTGTCGCGAAGCAAGATGAGCATGGTCTC C [1498565] 1498511 33 100.0 34 ................................. GGAAACGGCGCGAGGCGCACGGCGTCAGCCGCTC C [1498499] 1498443 33 100.0 35 ................................. TGGATGGTAATCGTAATAATCCATCGCCTCGTAAA C [1498431] 1498374 33 100.0 35 ................................. GGAACGTTGTAATCGAGCATGATTACAACTTCCAC 1498306 33 100.0 36 ................................. AGGTATAGCGGTTCGTTGTATTCAATCTTTGTTCGT 1498237 33 100.0 33 ................................. GAATCCGAACGGCGCTTTGGCCGCCGGTTCTTT 1498171 33 100.0 34 ................................. CAACCTATCCCGCCAGGACAGGCGGGACGCCTGG 1498104 33 100.0 34 ................................. ACATCGTTGCTGGTGACTGACGTCACCGAATCGC 1498037 33 100.0 35 ................................. TTTTAACTATATTTTTATATCTTTCTGGCAAACGG 1497969 33 100.0 35 ................................. AGCCATTGCCAGTCTCCAAGTCAACTTCGTCCAGC 1497901 33 97.0 33 .............T................... CATAATGCAAGAAGTTTTACCCGAAAATCTTTT 1497835 33 100.0 34 ................................. GTTTCGGTCCCGCTTTGTTGTTCCGGAGATGTCC 1497768 33 100.0 35 ................................. TTCGGCAATCTAAAAGAAATGCTTTGGCCAACCCT 1497700 33 100.0 34 ................................. GCGAATATGAGAAGATGTATCTCATGCGCTGGGA 1497633 33 100.0 36 ................................. GGTCACGAAATAGAAGAGTTTATGACACTCATTGCA 1497564 33 100.0 35 ................................. AAGACCTAAACGAACTTGGTCTTATTGGCTCTTAT 1497496 33 100.0 34 ................................. AATCTCGAAGTTGGACAGCAGGAAATGTACACCT 1497429 33 100.0 35 ................................. AAGTCGCTGAAAGTTGTCGCCGACTTGTATCTTGG 1497361 33 100.0 34 ................................. CTCCACCTCACCGAATTCCTCGATCAATTCGGGT 1497294 33 100.0 35 ................................. GCTCCCCAATGCTCTTGCGTCAGGCGTCCCGCCAG 1497226 33 100.0 38 ................................. CCAGTGGTAGCGAAAACTATAACGAAATTATTACCGGC 1497155 33 100.0 33 ................................. AGGATTGCGGCGATGTTGGACGATTGTAGTTTG 1497089 33 100.0 34 ................................. GCCTTCGAGCCTTTCCGCGATTGACGACAGGCTG 1497022 33 100.0 33 ................................. CAAGATCACGCTGCCCCAGAATCTCACAATTAC 1496956 33 100.0 35 ................................. ACAAATAGAACGCTTATAATTGTACTGTAAAATAG 1496888 33 100.0 35 ................................. GGTGTTTCGGGCAGTAAGACCGCAGAGGCCCAAAA 1496820 33 100.0 35 ................................. CGGCATACTGGTCGGCATACTGGTACTGGTCGGCG 1496752 33 100.0 35 ................................. TCCCGCTTTTCGGCAACCTGCATGAGATACCAGTC 1496684 33 100.0 34 ................................. ATTGAAAAACCACATTAAAATATCAGATAACTTA 1496617 33 100.0 34 ................................. ACCTCACTCAACTCCTCTATCACGAAGGATTCTT 1496550 33 97.0 34 .G............................... TCTGTCTGTCTGTCTGGCTGGCTTGCCTGTTGCC 1496483 33 100.0 33 ................................. ACTTTCGCTCAGCACGCGGATACACGCGAATAC 1496417 33 100.0 34 ................................. CAGTAGGGGTTTTTGTTCCAGTTAAAAATCTCAA 1496350 33 100.0 33 ................................. TCCGTTTTCGGCAAAACAGCTTTTTCTCGCGGC 1496284 33 100.0 33 ................................. ACTTTCGCTCAGCACGCGGATACACGCGAATAC 1496218 33 100.0 34 ................................. CAGTAGGGGTTTTTGTTCCAGTTAAAAATCTCAA 1496151 33 100.0 35 ................................. TTCGAGATTGCCAAATTTCAGTTTATCGTAGCTGT 1496083 33 100.0 33 ................................. TCATCCTCATTGATGGCAACCAAGCGGCGCGCT 1496017 33 100.0 34 ................................. GCTACGCTCATTTATCCTCAAGTCCAGACTGCTT 1495950 33 100.0 34 ................................. GAGTAATCTAAGTTTAGATCATTGCAGACTCTAC 1495883 33 100.0 34 ................................. GCTCGTAATCGTATGCTCCGCGTCCAGCCGAATG 1495816 33 100.0 35 ................................. TTATTTGCTTGTTAAAAATATTGGGCTTAATGATG 1495748 33 100.0 35 ................................. TGTTAAGGGGATTCTCACCCCTTTAACATATATTT 1495680 33 100.0 34 ................................. TATTTTGTTAATAGTAAAACCTTACAAAACCCTA 1495613 33 100.0 35 ................................. CCATATATTTGAAATTACGTGTATCGGGTTGGGGC 1495545 33 100.0 38 ................................. AATCATCTTTACGATTATACACCTAGTACACGTTTATC 1495474 33 100.0 36 ................................. ATCCCCTCTATCCTTTTTGTAATTCTTTCAATCAGT 1495405 33 100.0 34 ................................. GGGCTTGCAGACGCTGGAAATCTCTTTTTCGATG 1495338 33 100.0 37 ................................. CCCCCTCTGATACTGAAAATTGTAATCATGCTCAACA 1495268 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ====================================== ================== 124 33 100.0 35 GTCGCTCCCCCCACGGGGAGCGTGGATTGAAAC # Left flank : TTTGGTGATTATGGAAGAGGTATGAAATGTTCGTTCTCATTACCTATGATGTCAACACCGAAACCGAAGCGGGAAAAAAGCGTTTGAGAAAAGTGGCCAAAGCCTGTCAGGATTACGGTCAACGGGTGCAGAATTCGGTTTTTGAATGTGTTATTGACCCGACCCGTTTTCGGTTTTTGCGAGCCAGGCTTGAGAAATTGATTGATAAGGAAAAGGACAGCCTCCGATTTTATTTTTTGGGCGATGAGTGGAAAAATCGGATCGAGCATATTGGAGCTAAGCCAAGCCTTGACATTACCGGAACTCTGATAACCTGAGTATAGGGCAAGTGGTTGCGAACCTGAAGTGCACACGAAAATTCAGGGAGGTTCGCAGGAAAAACAGCACCTTAACAACAGAATATGGTAAAAGATTGATCGTTTTTCGGTAATTATCGGGAAACCGAAAAAGAACGAAGCCAACATCTGGCGTTTTGGGGATTAAAACCGCCAGATGTTGCT # Right flank : GGGTTTCAAAAACTCTAGGGCCTGTATGCAAACCAATTTATCATTGGTCTCATGGTATATAGATGTGAACTAATGAACGAACAATGGGAACGAATTGAACCATTACTGCCACCGCAGAAACCAAAAGCCAGGTGACCGGCACACGAGCATCGAACTGTTCTCCATGGGATACTCTGGATTGTACGGACTGGAGCGCCCTGGCGAGATTTCCCAGAACGATATGGGAAATGGATAACAGTGTACAGCCGCTTTCAGCGCTGGCGTAAAAAGGGAGTAGGGAAGAAAGTTCTGGCTGAACCGCAAACTCTGGCAGATCAACAGGGTGAACTGAGTTGGCAAATCCATCTGGAACAAGGTGCAGTTTTTCCTAGAACAACTGGACGGAAACCTTTGTATCCCAAACGATTAATTTCCGATAAAGGATACACCAGCCGTAAGTTCCGTTCATCATTTGGGAAAACACCATATTGCAGTGACCATCCCGCACAAGGAAAAAGAGC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCCCACGGGGAGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCCCCCACGGGAGCGTGGATAGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.30,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,9.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 4 3286426-3286092 **** Predicted by CRISPRDetect 2.4 *** >NZ_DF967971.1 Bellilinea caldifistulae strain GOMI-1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 3286425 36 100.0 36 .................................... AAAGAGGGGGGTATTTTTTTTGTAAAAATTTTTGAA 3286353 36 100.0 38 .................................... TAAATCGCCTGCGGGCGGAACTTGTCCTTGCACGCTTT 3286279 36 100.0 38 .................................... GTCTCGATGTTCTCATAAACGTCACAAAATCTGATTTC 3286205 36 97.2 42 ................A................... AGAACTAAAAATCCTTTCCACCATCGGTATCATAGAGGAAAG 3286127 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ========================================== ================== 5 36 99.4 39 GTCCGAATCAATAAATGCCCGTAAGGGCATTAAGAC # Left flank : CCGAGTTTGCGCTATTCTCCGGGCTGGGCAGCGGGGCGGCTTACGGGCTGGGGCAGGCGCGCCGTCTGGCTTCCCCCAGCCGCACATCGGATTAAGCGCCCGCATCGCGCCTCTGCACCTTAAAAACTGCATACGTCGTTTGAGGTGATGGACTACAACCCAACCGATTCGGATAATCCGGCTCATCCGGCGCTCCCGTTGCGGGAGATAGCCGCGCCGCCTGCCGCGGAAAAGTACGGGTGGTTGGGCAGGGAAAGCCGCTGCCCCCACCGGAAGTGGTGATCGTTTGAGGGTTTCGTATAGATTATGCGTACCCCCCTCCTCATTCCACCAAAAAATAACCGAATTTTGGAGGGGGGTACGCAAAAAAGATTAAAATTGTACGGAAAAAGCAATTTTTTGCCAGAATTGATTGATTTTTTATAAAACCGGTAATAAAATGTACTTATACTAAACGGACTTCACTGAAAAAACAAGAGAAATGCAGAGATGAATCAGTG # Right flank : ACGCCTTTTTGGCGACTTGGGCTTATTGTTGCTCATCCTGATCTCTTGATCTGCCTCAACGGGCTCGGCCGCTCATCAGCCGGTTGAAACGACACGACAACCGCCTGTTTTGCGCCCTCATCATCATCCATTTGAAGATCAATTACCGGCTGGACTGGAAAGTTTCGGGTATAATTTGCTGGTATAGCAGGGGGAATTTCGACTGAGGCTCAAGCCGTCAGGATAATAAATGACAATATCCGTTTAAATTGATCCGTAAAGGGGAAAAAAGAGATGATCAACGAACTGGAAACCCGAATGATTTCGGTGATCTTGCAATGCGGGGCATGGTACGCCGAGCCGGAAGATTACCATCTCTATCTGCATGTGGTTGCCGATGGCGAAAAAAAGATCCTTGTAACGACGGTTGCGGAGAGTGAAAGCGATGCCAGAAAAGTGATCCTTGAAGATGACAGCAAAAGAAAAATTCTTTTCACAATCTCCCTTTTCGACTTGCTCGA # Questionable array : NO Score: 3.03 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGAATCAATAAATGCCCGTAAGGGCATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.90,-11.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA //