Array 1 3634938-3637066 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT853885.1 Xanthomonas fragariae strain PD5205 chromosome 1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 3634938 28 100.0 32 ............................ AGACGGTACAACTGCATACGCTAGAGGTATAG 3634998 28 100.0 33 ............................ GTCATCGTGACAACCGAATACCGTGGTGTCTTC 3635059 28 100.0 32 ............................ TTACGGTCATGTCCTGGATATGGTGTCCAGGA 3635119 28 100.0 32 ............................ TTTCAGATCCCTCGCCTGGGTGGCCTACTCGT 3635179 28 100.0 32 ............................ GTCCATGCGGCCGGCAGCCAACAGGCTGCGAA 3635239 28 100.0 32 ............................ TATGTCGCTGAGGGGTGATCCATACCTAACCC 3635299 28 100.0 32 ............................ CTGGCTGCAACCGCTACTCCGTAATAACTAGG 3635359 28 100.0 32 ............................ ACCAGGTCCCGGCCCTTCTGGGAGTTCACTGC 3635419 28 100.0 32 ............................ AATGAGCAATAACTTTTGCGCTAGTGTTCATC 3635479 28 100.0 32 ............................ ACATTATCTTTTCCGCGAATCAAAAGCTTAAT 3635539 28 100.0 32 ............................ TTCCGGGGCAATCCCTTTACGCCTTCTTGGCC 3635599 28 100.0 32 ............................ ACCAAACGAACTGGTCCAGGCTAGGATCCGTT 3635659 28 100.0 32 ............................ TTCTGGGACCACACAACCTCGCCTGCGTGCAC 3635719 28 100.0 32 ............................ GTTCAGGGCAGGCGAAAGGTCTCAGCGCTGCA 3635779 28 100.0 32 ............................ GCATCGACCCAATGGCCGCCCTTGCCAGGCTC 3635839 28 100.0 32 ............................ TGCAGATGCGCGCGACGAATATCGGACGTGTC 3635899 28 100.0 32 ............................ AAACATGCGGGGATCAGCACGGCCATCGGTTC 3635959 28 100.0 32 ............................ CGTAGCCGGGAACTCAGCCAACTGTGCTTGCA 3636019 28 100.0 32 ............................ GATTTCACTGATTGATCTGGACACTGTGCAGC 3636079 28 100.0 32 ............................ TCGAAGTAGGCATAAAGCACGTTGGGCAGCCG 3636139 28 100.0 32 ............................ CAGACAAGCCAGACGCCGACCCACTGATAGTC 3636199 28 100.0 32 ............................ CGTCGTTTCGCGTCGTCCACCGCAGCCAAGGT 3636259 28 100.0 32 ............................ ACCAACGACGGGTGTCGCGCGCACCTGGGTAG 3636319 28 100.0 32 ............................ ACCTACGAGCCCCAGCCGTATGCAGAGGTTTC 3636379 28 100.0 32 ............................ CATTAGGCTGCACAGTGTCCAGATCAATCAGT 3636439 28 100.0 32 ............................ AGCCGCACCCTTGCAGACTGTACTCTCTGCAT 3636499 28 100.0 32 ............................ TCCACGTCCTCTTGAACAACATGTTCAGGGAG 3636559 28 100.0 32 ............................ TGCAGCAGGGGGAGGAACTTCCGTATCAAGAC 3636619 28 100.0 32 ............................ TGTAGGAGCAGACGGGGACAATACGCAAGCAG 3636679 28 100.0 32 ............................ TTTGCGCCACACCGAAACCGAATTCCGCGACA 3636739 28 100.0 32 ............................ TAAGCAGCGCGTTAAGAATACATTCGTGACCT 3636799 28 100.0 32 ............................ TAGATGCCCTGATTGCAGAAGTCAGGACCTCT 3636859 28 100.0 32 ............................ TCTATGGGGAAATCATTTTCGAAAAGTACATC 3636919 28 100.0 32 ............................ TCCCAGGGCAGTCGGTGTCGCACCTTGCTTCG 3636979 28 100.0 32 ............................ TTAAACCAAAACTCATGCCAGTCGTAGCGACT 3637039 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 36 28 100.0 32 GTTCACTGCCGCGTAGGCAGCTCAGAAA # Left flank : TTGCAGATGTTGATGGCGAGACCCTGGCTGCACGGGATGCTCGATCACCTGGCGGTATCGGCCATTCTCGCTGCCCCTGCCGACACCCAACATCGGCACGTCACCAGGGTGCAGGCCAAGAGCAGTCCCTCGCGCCTGCGCCGTCGTGCCATGCGCCGTCATGGGATCGATGCAGAGACAGCCGCCCAACGCATCCCGGATGCGGCAGCCGAACAGCTGCCACTGCCGTTCGTCGTACTGGGCAGCCGCAGCACGGGACAGGCGTCATTCCCGCTGTTCATCCGTCACGGCCCCCTGCTATCGGAGCCGACGAACGGCAGCTTCAACAGCTATGGCCTGAGCCAGGAAGCGACCGTGCCCTGGTTTTGACCCTTTTTCCCGGACAGAACAAAGGCTGCTTTAGAATCAACCACTTGGCAGGCACCTTGTTTCAAAGGGTGCCTGCCCTGTTTTGTCGGTATTTCTTTTATTTATCAATGGATTGATGAAGATCTGATCTT # Right flank : AAATTCAAGGATGGCCATACGGGTTGGATTGACGTTTGATACGCCCAGGGTTCCGTAGACCCTCAAGACCCTCGTTGCGCGTAGCGCCGTTCAAACTCTACAGGGGACAGGTCGCCAGTTGAACCGTGGCGGCGGTTGGGGTTGTAGAACATCTCGATGTAGTCGAATACCTCGGCGCGAGCGGCGTCCTTGGTGGAATAGGTCCGCCGCCTGATCCGCTCGCGTTTGAGCAGGCCGAAGAAGCTCTCCACGGGTGCGTTGTCGTGGCAGTTGCCACGCCGACTCATGCTGCACACCACGCCATGGGACGCCAGGAAACTGCGCCAGTCATCGCTGGTGTAGACAGACCCTTGGTCCGAATGAACCAAGCAACCAGCGTTGGGTTTGCGCCGCCACACCGCAGACAACAAGGCCTGCACGACCAACTCGGTGTCGGCCCGATCGCGCATCGCCCAGCCGACGACCTGCCGGGAAAACAGATCGATCACAACAGCCAGGTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCGTAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCGTAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [65.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //