Array 1 142-4541 **** Predicted by CRISPRDetect 2.4 *** >NZ_QSFW01000052.1 Prevotella copri strain AM42-23AC AM42-23AC.Scaf52, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 142 30 100.0 34 .............................. TACATGAGGATTCCTTTGCTACACTTCTTTGCTA 206 30 100.0 34 .............................. TGAAAGTTGGGCGATAGGTGCAAGCATGAACCTA 270 30 100.0 36 .............................. CGTTGCAGGGCGTCAGCGTGAAGCGGTGATCATCAT 336 30 100.0 37 .............................. AGATATGAAGGAATACGACAAGATACCAGCACAAGCA 403 30 100.0 34 .............................. GAAAAAGCGGTGTCTAGGCACTGCTCCGCAGAGC 467 30 100.0 33 .............................. GTATTTCTTCGTCCCTTACTCTGCTCTCTGGAA 530 30 100.0 35 .............................. AATTACCTGAAGCCTGGAGCTCGTCGATTACGTTT 595 30 100.0 36 .............................. TCTAGTTGGTACACTATCCAGGCAGCGGGGTGTGTT 661 30 100.0 35 .............................. AGTAGAAATTACCTACAATGTTGACAAGACGGGTG 726 30 100.0 36 .............................. ACTTGCAACTTGCGAGGAAGATACTTAAGTTCAGTG 792 30 100.0 34 .............................. TCGGGAAAAAGGTGCTTGATTATAAACGTGCCGA 856 30 100.0 36 .............................. TATTAAAGGGGGATTTAAATACAGGTGAAAGTTGTG 922 30 100.0 35 .............................. GAGTGAACAGACACAGAATCTGCGAAACTTTCTAT 987 30 96.7 35 ............G................. CTAGACCAAGCGGCAAGAATAAGAAACTCTAACAA 1052 30 100.0 34 .............................. GCATTATTAGTAGAAGAAACTACAAAAAGATTCT 1116 30 100.0 35 .............................. CCGTGCGCAAAGGTACAAATAAGTTTTGAACGCGA 1181 30 100.0 34 .............................. AAATATGGTTGACATTATAACTAATCGTCTTCAG 1245 30 100.0 35 .............................. TGGTTCTCGTGACGCTGCACGTTATCAGTTGCAAG 1310 30 100.0 37 .............................. TCCAGTCCACCGCTTGCGCCTTGTCTTCCCAAAGGTT 1377 30 100.0 38 .............................. AGAGTATCCAACAAATGTTGAAAGTAGAAAATCCACAA 1445 30 96.7 34 ..........C................... TTATTATCGATACTTGCGCCGGAACCATAAGCTC 1509 30 100.0 35 .............................. TTAAACGGAGACGGTAAAGGCTTGACAGAATATCT 1574 30 100.0 36 .............................. ACCCCCTTCCTCTATTGCAAAGGTACGACTTTTTTC 1640 30 100.0 36 .............................. TCTGATAGACTGCTAGTTGCGAGATTTCGTTGAACT 1706 30 100.0 37 .............................. GAAAAGAAAGAAGCCGTGAATTGAGGACGTATATTCA 1773 30 100.0 35 .............................. ATTCTCGCAACCTCAACCGCTTCAAACAAGCTGCT 1838 30 100.0 35 .............................. TTAGCAAGCTGAATCTCTTTATACTTCTGGGCAGC 1903 30 100.0 37 .............................. TGATGGAGTGCAGGACCCCGAAGTAATTGCAGATATG 1970 30 100.0 34 .............................. GCCCTAGCGCAGCACGGAAAAGCGCTAAAATATG 2034 30 100.0 36 .............................. CTGCATCAGAACGCAGCCAACCATTGTCGTTTTTGC 2100 30 100.0 35 .............................. GAAAAATGGGTAGACAGACAAACGGGTGCAATCAC 2165 30 100.0 37 .............................. GATGTTCAGAAATTGGCAAAGGAAGGAGAGAAATATT 2232 30 100.0 36 .............................. GATGGTACCCAGATGGCGGTTATCAGATACTCTCGC 2298 30 100.0 36 .............................. TTGTTTAGTTTGATACTTTCCACCGACTGGTGGATT 2364 30 100.0 35 .............................. ATCTTACTCATAACACAAGAGATTGGACTTTTGAA 2429 30 100.0 36 .............................. GATGGTACCCAGATGGCGGTTATCAGATTCTCTCGC 2495 30 100.0 35 .............................. AGTTTATTAATCGTTCTTCTGTCGGTTCTGATGGT 2560 30 100.0 36 .............................. GTGTATCAAATCAACTATAAAATTTATCAATATGGG 2626 30 100.0 38 .............................. AACAGAGTGACCGACATCGTGACGAAGGATTTCCCCCC 2694 30 100.0 35 .............................. CTCTATTCAGCTTGGTCAGATTTTACCAGAAGAAA 2759 30 100.0 34 .............................. GGAAACATCCTCTTACGAAGGCAGGCCGTATCAT 2823 30 100.0 34 .............................. TATTATTGAAGTCTGCTGTAGCACTATTCCCATA 2887 30 100.0 35 .............................. ATGAGCACTGCTGCCAATGCTATCACTATCAAAAC 2952 30 100.0 37 .............................. AGGGTGGAGAAGGTCAAGCTTTTGGTAGAGCCTTTGC 3019 30 100.0 37 .............................. ACCCATACTGGCTGCTCCTTGGCTCGGGAGAGTTCTA 3086 30 100.0 36 .............................. GCAGCGAGCGAGGCAAAGGCGGCAGCAGATCAGGCA 3152 30 100.0 34 .............................. GCAAATCTCGCAGACAGGTAATAATAGTCAGCAA 3216 30 100.0 34 .............................. CGCAGAATAATACTCCGTTAGATGTAAACGATAT 3280 30 100.0 36 .............................. TAGTTGCGGACATCATCGATGGTCATGCCTTCGATG 3346 30 100.0 35 .............................. AACTTATCCTTGAACTTACTCTGGTCAAGCAGCAT 3411 30 100.0 36 .............................. AAGGATAAAAAGCCTGCTGCAAAGAAGGTCGAGAAG 3477 30 100.0 34 .............................. ATACATAGCATAGCAGTACCGCTTGCTTCTGTAA 3541 30 100.0 34 .............................. AGTGAAATAGAGTTAAGACTCAATCGACTTGCAA 3605 30 100.0 35 .............................. TATTTATCTCCATCCTGGTGGGCATGGCTATTTCC 3670 30 96.7 35 A............................. TACTTAACATCATACCCAGGAAACTCCTTCTTGAA 3735 30 100.0 34 .............................. CTCGTATCGATGACGGTCTGGAAATCGAATCCCA 3799 30 100.0 37 .............................. TCGGTAAGCAGAACCGGGAAGATATCATAGTTCTCGT 3866 30 100.0 34 .............................. TCGAACTTGAAAGCGAAACCTGGAAGTGAACCGC 3930 30 100.0 34 .............................. TCGTTAACCTCAAAATCCTCCTTGCGATTGAGGA 3994 30 100.0 34 .............................. AAATTTGGGAACCCAAAAAGGCCGACACATCACG 4058 30 100.0 34 .............................. ACTGGTGTTTGGTATCTGCCTGGGCTGCCATACC 4122 30 96.7 34 ....................A......... CTGAGTACTGCAGATTTTCCGGCAAGTTCTGTTA 4186 30 100.0 37 .............................. ACATAACCACCCGGCGAGGAGACGGCGATATCCACCT 4253 30 100.0 36 .............................. AACAAATATGGCGTATCAGCAACTAGAATCAGACAG 4319 30 100.0 37 .............................. GAAAGACTTGCTTACATTCCTTCTTGAATATAAGAAT 4386 30 100.0 35 .............................. TTACATACCTGCTCCATGCTAAAGTTCAGTGTAAC 4451 30 100.0 32 .............................. AGCGCAGCGATGCCAGTACCGTGCCTTGATAA 4513 29 90.0 0 ........C................-..T. | ========== ====== ====== ====== ============================== ====================================== ================== 68 30 99.7 35 GTTCTAATTGTACCTTTATGGAATTGAAAT # Left flank : GTTAAGAACAAGCCTTGACACAGTTTAATTTACACCCCCAAAAAATATCTTTAGGCATCGACATTTTTTCTGAAGATTTTTTGTATCTTTGCACCCACAAACCTATTGATTCTTCGAGCATCTATGCCTAAGAATTAACGGG # Right flank : TCAGAAGTACTGATAGCTTTAGTATTATACCGCAATCTCTAGTTATAAGTGTTCAGAATGTGTCTCCTCCTGCCACAGCATTCGACTCCTTCAGTTATCGCATTCGACTCCTTCAGCTATCGCATTCGACTCCTTCAGTTATCGCATTCGACTCCTTCAGCTATCGCATTCGACTCCTTCAGCTATCGCATTCGTCTCCTTCGGTCACTGCATTCGACTCCTTCAGCTATCGCATTCGTCTCCTTCAGCCACTGCATTCGACTCCTTCAGCTAACTCAGCCGTCTCATTCTGCTAACTCAGTCATCTCCTTCAGCCACTGCAGCCGTATGTGTCAACTCAATGAAGTAGATGAACTCGTGAAATGAAGTGGATGAACTCGTGAAATGAAGTGGATGAGTTCGCATAATGAAGTTCATGATTTCTGCACAATTGCCAATACATGCGAATGGTAAAGCAAAAGTGGTTGTTCGGAATCCGAACAACCACTCTACATGGTGCT # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTAATTGTACCTTTATGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.80,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [2-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA //