Array 1 75777-74792 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_AOYC01000036.1 Salmonella enterica subsp. enterica serovar Paratyphi B str. ATCC 51962 SEEPB962_30, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                                                           	Insertion/Deletion
==========	======	======	======	=============================	==========================================================================	==================
     75776	    29	 100.0	    32	.............................	GGGCGTGCTGGTCAAAGGTGACGGCTTTGTCC                                          	
     75715	    29	 100.0	    31	.............................	AATTTCCTTTTAGAATCCGATAAGTTGCCTA                                           	
     75655	    29	 100.0	    32	.............................	CCTGGCGGCACACTCTACCGCCCGTGGTGACA                                          	
     75594	    29	 100.0	    32	.............................	GCATCGCCTGGCTGAGTCCGTCGCTAACTGCG                                          	
     75533	    28	  96.6	    32	..........-..................	ACATCTGGGAGGCGTGGCTAAAACTTACAGCT                                          	
     75473	    29	 100.0	    32	.............................	GGCGCGCGTGTTGTTGGTGATTCCGCATATCT                                          	
     75412	    29	 100.0	    74	.............................	AATAAGGCGCGGTGCCACCCTCGGCTTTAATTGTGTTCCCCGCGCCGACGCGTTCCAGCGCACGTTACTCGATC	
     75309	    29	 100.0	    32	.............................	GCACTATTTCGAATGTCTCGACGCCAGATTTA                                          	
     75248	    29	 100.0	    32	.............................	TAAACACCTCTTCTGGATATCCGTTACCAAAC                                          	
     75187	    29	 100.0	    32	.............................	GAGCTATCTCGTCGGGTCGTTGCAAATATTGT                                          	
     75126	    29	 100.0	    32	.............................	AGTATTGCAACTACGGCTGACGCGCTGATCGA                                          	
     75065	    29	 100.0	    32	.............................	AACGAATTGAGACTATTAGAGATTATTCGCCT                                          	
     75004	    29	 100.0	    32	.............................	GCTAAAACGGCGCTTGAGAACAGTATCAATAT                                          	
     74943	    29	  96.6	    32	..........T..................	CTTCATCTCGCAGTACGTAAACGCCTGCATCA                                          	
     74882	    29	 100.0	    32	.............................	AGGGGCGTTCCGCAGTCGACAAGGGCTGAAAA                                          	
     74821	    29	  93.1	     0	A...........T................	|                                                                         	A [74794]
==========	======	======	======	=============================	==========================================================================	==================
        16	    29	  99.1	    35	GTGTTCCCCGCGCCAGCGGGGATAAACCG	                                                                          	       

# Left flank :   GTGCTCGCTGCCGGTGAAATTGAACCACCTCAGCCTGCGCCGGATATGTTGCCGCCAGCAATACCGGAACCTGAATCACTGGGTGATAGCGGCCATCGGGGGCATGGTTGATGAGTATGGTGGTTGTGGTCACGGAAAACGTACCGCCGCGCCTGCGGGGACGTCTTGCCGTCTGGTTACTCGAGGTTCGTGCAGGTGTTTATGTTGGCGATACCTCGAAGCGTATTCGGGAAATGATTTGGCAACAGATCACACAGCTTGGCGGTTGCGGAAATGCCGTCATGGCTTGGGCGACCAACACGGAGTCGGGATTTGAGTTTCAGACATGGGGTGAAAACAGACGTATTCCGGTAGATTTGGATGGACTGCGTTTGGTTTCTTTTCTTCCTGTTGAAAATCAATAAGTTGAATGTTCTTTAATAATAAGGAATTGTTATCTTACCGTTGGTAGTTTGTTATGTAGTAAAAAAGGGCTTTTAGAACAAATATATAGTTTTAGT
# Right flank :  TTTCACCAGCATATCAGGACGTTTTTTCCGCCTTCGCCAGCTCTTTTACCAACGGCAGCATTATCCGCACTACATCGCGGCTACGGCGCTCAATCCGCCCTGGCAGCGCCTTGTCAATATGCTGTTGATTATCAAGCCGTACGTCGTGCCAGCTATTGCCGTTCGGGAAGGAGGCATTTTTCACGCGTTGCTGGTATCCGTCTTTTTTACCCAGATTCCAGTTCGTCGCCTCAACAGAAAGCACCGATATTCCCGCTTTATCGAAAACCTCCGCATCATTACAGCAACCCGTTCCTTTGGGGTAGGATGGATTGCGTCCCGGATTGGTGTTGGCGGCGATACCATAACGGCGCGCAATCGCTAATGCCCGATCGCGGGTCAGTGTACGCACCGCTTCCGGCGTATTTTTCCCGCTATTAAAATAGAGCTTGTCGCCAACAATCAGGTTATCGAGATTAATCACCAGCAGCGTATTTTTCTTCTCAGCGTCACTCATTCGT

# Questionable array : NO	 Score: 6.02
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:-0.18, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGTTCCCCGCGCCAGCGGGGATAAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [4,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-12.00,-13.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [4-6] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [50.0-71.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.41,5.51   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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