Array 1 16158-14868 **** Predicted by CRISPRDetect 2.4 *** >NZ_QSDN01000083.1 Ruminococcus sp. AM58-7XD AM58-7XD.Scaf83, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 16157 31 93.8 34 .............T..-............... ATAGTTACTACTACAAATATTTTATAATTATTCC 16092 32 96.9 33 .............T.................. TCGTATAATCGGTATTCCTCATCAGGAAGGATT 16027 32 96.9 35 .............T.................. CTTGTTTGGTACCCTTATAATCAATTCGTCCAGCT 15960 32 96.9 35 .............T.................. ACCATGTTCTCCATGTTATTTGCAAGTGTCTGTAC 15893 32 96.9 33 .............T.................. CTCCTAGACAATGGGATTATAGCACAGATCTTG 15828 32 96.9 33 .............T.................. CTTTATAATAAGAAGAAATACGATTGGAGGCGG 15763 32 96.9 33 .............T.................. TGCTCCGAGAGTCGCAAGATCAAGCATTTCATC 15698 32 96.9 35 .............T.................. TGTAACTGGAATCCATCCTGTGTCCTCGTGCTTTG 15631 32 96.9 33 .............T.................. TACATCGTCAACCATCCTCACCAATTTCCCACG 15566 32 96.9 34 .............T.................. ACCAAGAGGTGTCTGTGGATGTGACGCCCATGGT 15500 32 100.0 35 ................................ AGCCAATGAACAGACCGCCTTTTTGATACGCTTCT 15433 32 100.0 35 ................................ ACAGATTGCATAACCCGGAACTGGCACGTCAATTC 15366 32 100.0 35 ................................ CTATTATTTATATGTCTGCACATGCACACGTTATT 15299 32 100.0 35 ................................ TCATCAATGCGAGCGTTGCCGCCTGCCAGAGCTAC 15232 32 100.0 35 ................................ AAACAAATGCACAGAAATGTAACTGGCGTTGTTGG 15165 32 100.0 33 ................................ AACTAAGTCCCGGAAAAACGGTTGACTTTCGAA 15100 32 100.0 34 ................................ CATGGAAGATTGTATTTAATGTAAATTTGATCTT 15034 32 100.0 34 ................................ GCAAAAGAATTGAAGCAGAAGATAATCGCCAGAA 14968 32 100.0 37 ................................ GGTGTATTTCATCACATCCACGACCGCACCCTTTTTG 14899 32 96.9 0 ...........................A.... | ========== ====== ====== ====== ================================ ===================================== ================== 20 32 98.1 34 GTCACTCCCCTTGCGGGAGTGTGGATTGAAAT # Left flank : GAGCGTGTACAGGAGCTGCTGTCACTCCCCCGTGTACAGGAGCTGC # Right flank : TTGAGGAGATGATAAATTGTTTCAAAATTACGGAACGTCTAAGGAGACGTTATTTAAAGGGATTTTGCTGGCACCGCTCCTTTAAAGCTCCTTTGAAAGCTGTATCTCATGAGTGGCGCTATTGTGCAGACGGTGAAGGTCTGGATGCAAAGGATGATAAAGATTATACAGCCGGATGTGATGAGAGTAAAAATTCATTACTGTGCACGGAGTGGACAGTAACGCTTGTTGTGTATATCGTATGATTCTGAAGAGTATGCTGTGGGAAAGTGAAGTGGATATTTGTAATTGAAGCAGGTGATTTGCTTGATTCGGTTAAATAGTAAGCTGTTACTCAGATAGTTGTTATTTTGTATATCGTGAAGCGTGTTACTGAGAACAGAGTAAATAGTAACAACAGTAATGATTTGTCGGATTACATCATCAGGCTTTTCTTGCCAGTGCTTAAAGAACAGGATATAATATTTTTAACCGAAGTAAACAGATAATCTTTTGCCATA # Questionable array : NO Score: 8.85 # Score Detail : 1:0, 2:3, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCCCCTTGCGGGAGTGTGGATTGAAAT # Alternate repeat : GTCACTCCCCTTGTGGGAGTGTGGATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.90,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.42,4.5 Confidence: MEDIUM] # Array family : NA // Array 1 368-7 **** Predicted by CRISPRDetect 2.4 *** >NZ_QSDN01000150.1 Ruminococcus sp. AM58-7XD AM58-7XD.Scaf150, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ================================== ================== 367 32 100.0 34 ................................ TTGATACGATACTGCTGCGGGCGTGTCTGATCCA 301 32 100.0 34 ................................ AGGTTTTCGTCCGCCTCTACTTCTGGGATTCCTG 235 32 100.0 34 ................................ GTCGCACAGTCTATGACCTTTGCAGAGCTGGAAG 169 32 100.0 34 ................................ CATTGGATCTGTTTGAGCGTGTACAGGAGCTGCT 103 32 100.0 33 ................................ ATAGTTACTACTACAAATATTTTATAATATTCC 38 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ================================== ================== 6 32 100.0 34 GTCACTCCCCTTGTGGGAGTGTGGATTGAAAT # Left flank : TAAAAGATGCTTGTTCTGATAACCTATGATGTGAATACAGAAACGGCAGCCGGAAAAGCAAGATTACGGAAAGTAGCAAAACAATGTGTTAATTATGGAAGACGTGTCCAAAATTCAGTTTTTGAATGCATCTTGGATAGTGCACAATGCGTTACCCTTAAGGCTGCTTTGGCGAATATTATTGATGAAAAGACAGATAGTTTAAGATTTTATTATCTGGGAAATAATTATAAATCTAAAATAGAGCACATGGGAATAGAAAGAGGAATATCAGCAGATGATATGCTGATATTATGATGAAAAAAGTTTTGAAGCCAATCAGGAGAGGTGCGAATGCTAAGAATACATAAATTCTCCAGAAGACTCGCACCAGAAAAAAAGAATTGTTATCTGATAAATGGCAGTATATAATTATTTGTATCAGTAATTACAGGTGATTTTGAAATGTTACTTTAGAAGATAATGACAAAATTGAAATGTAATTATTGGTAAAAATTGCT # Right flank : TCTTTTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCCCCTTGTGGGAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [10,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.90,-4.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [8.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,4.77 Confidence: HIGH] # Array family : NA //