Array 1 50865-49650 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP035988.1 Bacillus mycoides strain BPN29/1 plasmid unnamed1 Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== ================================================================================================================================ ================== 50864 26 88.5 40 ..............T.C...C..... AATACCATAACACTGTAAATGTCAATGTTGCGTTCAGTTG 50798 26 84.6 40 ........A.G.C.T........... AGCAGTTATTGAATATCGCTGACATTAGGAAGTTTGAACA 50732 26 84.6 39 A.............TA..A....... AAATTGGTGCATATTTTGGGCCAATTTTTTCAAAAGTTG 50667 26 96.2 36 ........A................. AAGGCGGAGATGCAAACACTAAAGGTGAAATTGAAT 50605 26 80.8 39 .....C......ATT.......T... TTACGGAGTTCAATTTGCTTAATTTTATGAGTTTTTAGG C [50599] 50538 26 80.8 39 ........AG..GTA........... AGTAATCACCCATTAACTCTTTAATAACGTTGATAAACG 50473 26 100.0 39 .......................... GGTCGCTGCTGCTAATAATTGAGTTACTTCAAATGTGTG 50408 26 92.3 39 ...............AC......... AAGCATGTTTACCAAACTTGTCTATACCCCCCTCAAACA 50343 26 96.2 39 ..............T........... ACTAGCGTTCGTATGCTATATTGGCAAATCGATAGATTG A [50334] 50277 26 88.5 36 ..............TAC......... GAACTTAGACTTACGTCCTTCTTACGAGGATTTACG 50214 26 80.8 39 .C......A...GTA........... AGGGTACACCTGCAATAAAAACATTTAGATTTTTAATCG 50149 26 88.5 40 ............C.TA.......... AGGGATCTTCTGCATAATGTTTCATGTAATCGCACATTAG 50083 26 88.5 39 ........A.....A.......G... AGTATGTTGTTGATAAATTGAACCAACAAAAGAACGCCG 50018 26 88.5 40 ...........TA.T........... ACTTGATTCTGTCAGCAAGCGTAATTTTATTAATTAACTG 49952 26 92.3 32 ..............T.C......... GAAACAAGAGCAAAGCGACATCGATTAAAATG 49893 26 53.8 35 ..C.T.TA.TTT.TT..CTT...... TGCTTTTTATATTTTTCTCCATTCTTTCACAAACT A [49886] 49831 26 61.5 128 C.AG.....C.T..TT.T.A...C.. CATTTTTTCTGTATTTTCTATAATCTTTTTGTTAATTCTGTTAACATCATCATCTGACAAATATGTAATTTGGCTGTATATAAAAACCTTACCTTTTTTTCTTTGTAAGGGGTATGCACCTATACAGA TA [49807] 49675 26 69.2 0 .....GG....A..G.AA.T.C.... | ========== ====== ====== ====== ========================== ================================================================================================================================ ================== 18 26 84.2 44 TTTTATCTGAACTACGTGGGATATAA # Left flank : CCATCTACTAAGTAAGAAATGAATTCAGGATCGGGCGAACTAATAATCCAGTCCAATCCGTTCTGAAGAAGGAATTCATTGTTTTCTAAAATATAGTTTTTAAGATAAACAGAAAACGTAAAATTCTTGCTTTTTTTTATTCGGTTTATTCTCAAAGATATATAAGTTTTCTGCATATACTGCATTGGATATTTTTAGAGCTTCTTTAATAAAGCTCACAAACATAAAACGATACGAGAGAGGAATTACTTTGCAAGTAAAGCTTACTTTCAACCTCATCATCTTCCTCCTTGCTTTATAATATAAAACTATTATAAATTATCAGAAAAATAACTTTCAACAAATACGTAGAAATAAATGGAAAAGTTCTTTTCATAGAAAAGTTTTTCATTTTGTTTGGAGAGAAAACAAAATGAAATTGGTGCTTTTTTATAAAATGTTGGTTGCTACACGTAGTAAAATGTTGCTATCATAAGTTATACAACCGTATATAGATAAGT # Right flank : TCAGCTTCTTCAAATTTGTTGACTAGAATAGGTTTATCAGAAAGAAAGAAATTTTTTTCTCCTCGAGTTTTGTAAATTCGTAATTGAAATTTACTCATCAGATGTTCGAATAATTTTTGAAATGCACTTTCCGAGTTTGTTTTTAAATAATTCAAAGCATCCTCTAATTTATCTCCGAAATAAAGTTCTTTAGCAAATTTTACAGCCGTCTTTTGACCACTGGTCATCAGGAGATAATGTATTGGTTTCATAAAATCAGGAATATCCTTATTGTCATCAATCAAATTCTTTAAATGTGGACTGCGAATTAATGTCAAAATCAAATGTAAAAGCAAATTAGCCTCGTCTTTTGACCATTCTACAGTTGCAACTTTAACCATCTTGTTGAATTCGATGTCTGCTTTATCTGATTCTAGTACATCAACAAGTTTACGAAATCTACGTGCTATTGAGTCTTCAAATTTACCATAAATGTCCTCTATTTCATTTCTATTTACATA # Questionable array : NO Score: 2.59 # Score Detail : 1:0, 2:3, 3:0, 4:0.21, 5:-1.5, 6:0.25, 7:-0.49, 8:1, 9:0.12, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTTTATCTGAACTACGTGGGATATAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.23%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [41-23] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //