Array 1 10137-9632 **** Predicted by CRISPRDetect 2.4 *** >NZ_MSBC01000013.1 Lentilactobacillus parabuchneri strain FAM23168 FAM23168_scf_0013, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================================================= ================== 10136 29 100.0 32 ............................. TAGGGCTTTTTACACCGTTGAAGCTAGATGCT 10075 29 96.6 32 ............................T TCAAGTAGTTGTCGATAAGCCTACTGGTATCA 10014 29 100.0 32 ............................. GTCCTTCTTGCGCATGTCATTAAGATTATCCG 9953 29 100.0 32 ............................. TCAAAACTAATTTATGGGTGGCAAACTACGGT 9892 29 100.0 32 ............................. AAAAAGACCGTTTCACCGGTCATTGAGTTTGT 9831 29 96.6 32 ...................A......... GTTATCTGATTCATTAGTTACTCTCCCTTTAG 9770 29 93.1 81 .......T..........A.......... ATCCGTTCTGACCTCTTGGCCCACTATCTCACGTATTCCCCACGATCCTACAATTGGGGCCGTGAACTTCGCAGAAACCAA 9660 29 93.1 0 ..........................A.A | ========== ====== ====== ====== ============================= ================================================================================= ================== 8 29 97.4 39 GTATTCCCCACGTATGTGGGGGTGATCCC # Left flank : GTTAAGTGGACGAGAGATGTTCACTATAATCTGCTAGAAATGAACCGAGTAACCTGGCGGGCTTTAGTTCAGTCTGCTATTCAAGAACTAGGCGGGCAGGCCACTTTAGCTCAGTTGTATGATATTTTAAAAGGATGTAAGCGCGCTGAAAGTGTTTCGGATTGGAAAGCGAAAATACGGCAAACACTCCGTGCTAGTGGATTTAAACGTGTCAAAAAAGGTACTTATACGTTAGATATTAGCTAGGTTGGGTCCTTTGAATTTGGTTGATGAGAATCTATAAGTTTCTCCATGTTCCTAATTTTTGCTGAATACTGTGTCAAACTGAGTTTAGTAGTTTGCGAAAAAGAATTCTCCTGTGATAAGGAATGGATTCCTCGTAAATTGGATAATGTATGCCAACACTTAGATGATTTCGATCAATTAAACTTAAAGCTAAAAGTCATTGAAAATGAGTGTTTTGCTATTTTCAAATGGCTTAATGGCAGCGTTTCTTTAGT # Right flank : GTTAAAGAAGTTATGACCAACGGGGATTTAGGAGAACTTGGGTTAACATCTAAGCCCAAAGCGACCACAAGTACTAGTAAACGAACTGTTAGCTCAACCAAGAAGGCATCCAAATAGGATGTTTTTTTATTATGAGGATGAATTAGCATATAAATCCAAGCTAATAGGCACTATCATTATTACGTGCTATATTATCTTCGTAGAGAGTCAATCGCTGAGTGGCGTGGAAAACCACTCATCACTCTTCCCATCGTGTTGAACAGCGGATAGCCCAATCGGCTGACTATAAATTTATTTCAATAAATTTAATTTATCCGGCGGTGAATAGCCGGAACGGTCCTTTAGGGATTCGTTAGTAGACTGATTAATGATGAAAGAGCCACTTTTCGCTGCCCACACCGAATGGTTTTTCTTCATGCTGATGCAAGGAATGGAATCTTTTCGGCTAAAATGCTGGACTTCTTTAAAATTATTGGTAAACTTCAGTTGCTTATGAAAGG # Questionable array : NO Score: 5.56 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:-0.54, 8:1, 9:0.98, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACGTATGTGGGGGTGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCACGTATGTGGGGGTGATCCT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.80,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 49094-48883 **** Predicted by CRISPRDetect 2.4 *** >NZ_MSBC01000013.1 Lentilactobacillus parabuchneri strain FAM23168 FAM23168_scf_0013, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 49093 29 96.6 32 ............................T ATCGATAACACCATAGGCAATCGCAACTGTGG 49032 29 100.0 32 ............................. GTCTTCAGCAGTTAGGAAGCTGTCGCCGTTTT 48971 29 100.0 32 ............................. GGAAGCTCGAGTTTATCGGCTTCCGTTTTCAG 48910 28 79.3 0 .......T.....A....A...C-.G... | ========== ====== ====== ====== ============================= ================================ ================== 4 29 94.0 32 GTATTCCCCACGTGTGTAGGGGTGATCCC # Left flank : ATGATTTAATTAGTCACGGTGTTGATGCAGACTTGTATGAGCTTCAGGGTGCTGAGCATATGGACGAATTGTTTATGCAACCAGAAATCACTAAATTAATAATTGATTTTTTGACTACACACTTTGGGAATGGTGCGTAGATTCTAGAACTTTTTCGAAATCAAGGAAATGGTCTTTAACTAAAATTATTTTTCAATGAAAGCGAACTTCTGAAACAATTTATAAAGAAGTTCGCTGTTTTATTTTGGATATTTGTTAACTGAAGTAAAAACCTTGTGCTGAGGAAAATGAGGGGGAGCTAAAGTAAATGTTGAGATGTCGGCCGAATGTTAGTAATATTAGTTTGTGCGGTGACGTGGATCAGGGATCGAAAATAGGCTATTCATACCTTATGGGTGATGCAAGTGGTCTTTTGTAGTTGGCAAAACTTTATTTGAATAGAACTAATGAAATTTGACTGTTTTCCACTTTAAGAATGGCTATAACAAGGATTTTTTAGT # Right flank : CTTCAATAATCAGTGATCAAGCTGCTAAGATTAAACAAGATACTGAGTTCCACTTGGGACTTAATTTGGCCATAGTTTTAGGCCAGTTAAAATCGAACGAATAATCATAACCGTACACGCATTTTTAGTTAGGGGGTATCAATTAAATATGGCTCATACAAAACCAAACTTAATTACAGCAAAACAGATCGACACTTTTATTAATTCAAATGCAAGCAATGTGGGACAATTGGATGATAATACGCCTTTAAAGAAATTGCCTAAAAGCTTTAAGCCTTTAAAGAAATTAAAAAATCAGGTAGCGTCTCAGGCAATTATCCAAAATTTGTTAAAGGAACAGTATTTTTGGAGTACCCAAACAACAATTTTAGAGCCAGTGTCCACCTATTTGAACACTTTGGTTGATAGTCAAAATAAAGCAGTCTTAAAACAGTTAACCTCACAAGATATCAAGCTAATTAATTTGTATCAAATCATTAATCAACTACAAACTAATGGTG # Questionable array : NO Score: 5.56 # Score Detail : 1:0, 2:3, 3:0, 4:0.70, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACGTGTGTAGGGGTGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCACGTATGTGGGGGTGATCCT with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.50,-7.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 77987-77714 **** Predicted by CRISPRDetect 2.4 *** >NZ_MSBC01000013.1 Lentilactobacillus parabuchneri strain FAM23168 FAM23168_scf_0013, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 77986 29 100.0 32 ............................. TTAGGCTTGCTCTCGGTATCAACAGAACTAAC 77925 29 100.0 32 ............................. CTGGGGATATGACCAAGAAGCAAGCCAATTCT 77864 29 100.0 32 ............................. CCGTATTCGGTAATCATTCAGGTGATTTAGAG 77803 29 96.6 32 ..............C.............. TTAGTGAAGCTGTTTGAGTTGGCATTTTCTCT 77742 29 86.2 0 ....................A..G..TT. | ========== ====== ====== ====== ============================= ================================ ================== 5 29 96.6 32 GTATTCCCCACGCATGTGGGGGTAATCCT # Left flank : ACAGTAGTTTGAGCAGGACACTTAAATCATATTCACGTGGCCGGCCAAAGATATAGGGCTCTTTAATGGCTAAGTCTTCAACGACATAATTGATAAAACGGGCCGGATGGTTTTCCTTGGACTCCCAATCAGTTGCGATACTCAAAACGGTTTGGTTTATGTTATAATTATTTTGCATATTGGAACGTCCTTTCGAGGATGATTTCGTAGTCATCGGGGTTCGGCCGATGACTTTTTTTATTTTAGATTATAACAAAAGCGATTCATCGAAAGAAACATTTTTCTTCGATGAATCGCTTATTTTTTGGGACTTATGTCACAGCCCCTTCAGTTCATATTTGTACGGACCGCGTTTTTGTATTTGTGTTGTGGCATTTATGAATTCGTTTATAGTAAACTGTTAGTAGGATCGTTAGATAAAGGGGTAGAGTAAAATACGAACTAATGAAAAATGGTCATTTTATAATTTGAGAATGGCTATGTTTCGGGGTTTGTTTAGT # Right flank : GCCCTCATAAGCTGGTAGCAGGCTATTCGCGTGAAGATCCATTACTGATCAATAAAAAGAATCGTGATCTCAGGATAATTTGCTTCTCCTTCGAATCACGATTTTTTGTAAGTATTGAACTGGATTTATCCTTCAGCGTCATGAATCGCATCGGAAATATTATCAGCCGAAAAATCATGATTCATGTATGCGTCATTGCTAATCGGCAAATGCTGTTCCAGCGTATCAAACAACTGATAGGAAACGGTGCCTTTGTCTAAATGAAATGCCAACACATGGCCGCCAAACTTATGATCATCTGATAAAAAGTGGTGGTGGAAACCCGCGACCGCAGCCCCGTCAAATAATTCCGGAGAATAGTAGCTAATCATTGTTCCATTGACCTGATCACGGGTAAAGATGCTTTGATTACGAGCGGTTTCGGCTAGTGTCTGAAAAGGTGGCACGGATTTCTTAACCGCCCGAGTTTTTATTCCGGAGAAAGTGCCAGTAATTTTGAT # Questionable array : NO Score: 5.89 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACGCATGTGGGGGTAATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCACGTATGTGGGGGTGATCCT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.80,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //