Array 1 356898-361199 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP068161.1 Corynebacterium propinquum strain FDAARGOS_1112 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 356898 29 100.0 32 ............................. TTAATAAGTCTGAGGTGTAAGGCGAGAGTAAG 356959 29 100.0 32 ............................. CGAGCTATCGAACACGCCCAGCAATCCGGAGC 357020 29 100.0 32 ............................. TCCAGATGGTGGACCATGCCGTAGGGTGTTCC 357081 29 100.0 32 ............................. AGCACCAAACACAGGACCGGTAGTACCAGCCG 357142 29 100.0 32 ............................. CAGCGCGGATTACGCCGTATGAACGCTCATTG 357203 29 100.0 32 ............................. CTCGATGCCGATTGAGGTTTGGTTTATCCAGG 357264 29 100.0 32 ............................. ATTAAATTCACGCCATTTTCCGGCGCCCAAAA 357325 29 100.0 32 ............................. GAGCCTTCTACCAAGCCGCCGAAGCCTGGCCA 357386 29 100.0 32 ............................. CAGGCGCGCGTGATGGTGCCAAGGCACATGAA 357447 29 100.0 32 ............................. TCGTTACCCATTCATATGCCGATTTAATCCAG 357508 29 100.0 32 ............................. CGTTCCAATTTTGCGCAAATTGAATGTTGCAT 357569 29 100.0 32 ............................. CTCTGGCAAAGTGACTCTAGGGAAAAATCTAG 357630 29 100.0 32 ............................. ACGCTCGGTAGCCTATTCGGTTATAACACTGG 357691 29 100.0 32 ............................. GACGATACCCTAGCTAATCTTCGCCCAGCTCA 357752 29 100.0 32 ............................. CAGTTCAGCGCAAAGTAGGCAACAGCCGCGAA 357813 29 100.0 32 ............................. TTTGGTTCCTGCCCCAAAGATCGTGACTAGCA 357874 29 100.0 32 ............................. TTGGGAAGCCGGGTGATCGTCAACGCTGGTAA 357935 29 100.0 32 ............................. CGATATTTCCTTATTATGAGCGCGTAGCTCGT 357996 29 100.0 32 ............................. AAGCCCAGGCATTGAATGTTAAACCACGCGCC 358057 29 100.0 32 ............................. CGTGCTGCATGTGCCCGCGCGACGTTCCGTTA 358118 29 100.0 32 ............................. AATAGGCGACGCTGCTCTGCCCCCCTGCCAAG 358179 29 100.0 33 ............................. AGTCAGGCGCGACTTTTTCCCACCAGTTTTGCA 358241 29 100.0 32 ............................. GGTTACGCTCACGCCCGGCGATGGTGTATCTG 358302 29 100.0 32 ............................. CGGAATGAAGCGTCAATGTATCCTGAGCGATG 358363 29 100.0 32 ............................. GATGATGGACGATTATCAAGTGCTTTATGGCC 358424 29 100.0 32 ............................. ATCGATCGCGCGTATTTTGATTTCAATCGCTC 358485 29 100.0 32 ............................. TCGGGCCTATGCGTGGCGTGGAAGTCTACACG 358546 29 100.0 32 ............................. CCGGCTCTGCCTAATGATAGGCGTGACCCAGA 358607 29 100.0 33 ............................. CGGAGTTGTGGTGAAAACTCCCCCCCCGGTACA 358669 29 100.0 32 ............................. GAATGTTCCAGCATAAAAATGTGGAACAAGCT 358730 29 100.0 32 ............................. AAGCATATTGGCGCGCTACTCGCTGGGGATAA 358791 29 100.0 32 ............................. ACATTGGCGGCTTTGGTTTCATCCCGGCTGGA 358852 29 100.0 32 ............................. CCTGAGGACCCGGAGCACGAAGCCGTGGTGCA 358913 29 100.0 32 ............................. ACATGACCACCGCAGAGCTCGTTGATGGGGAG 358974 29 100.0 32 ............................. TTGGCCTATTCCGCATCAAGGAAACCGCTGTG 359035 29 100.0 32 ............................. GATTTCGCGTACCGTTGTTTCGGTTAGTACGG 359096 29 100.0 32 ............................. AGCCCGGCTCTAATATCGCGCTGCTTGAATGG 359157 29 100.0 32 ............................. GGGGTATCTAGGCATTATCGTTCCTCATATTC 359218 29 100.0 32 ............................. TAGTGTGAGGGTCTACCGGGGTATCCAGAGCG 359279 29 100.0 32 ............................. TGCGATATCTGCAACTCGACCCCGTGCGAATG 359340 29 100.0 32 ............................. ACCATCGTGCGCCGCTTACCTATCCGCCCCGT 359401 29 100.0 32 ............................. CCACTGTTTAATGATGGTAGCCTAACTAGCTG 359462 29 100.0 32 ............................. AGGCCACACCGCCGAGCGGGGGCAAGCTACCT 359523 29 100.0 32 ............................. CAGTTCTTCGCTAGGCCAATTCTCACGGGAAG 359584 29 100.0 32 ............................. GGTCACCGGCAAGTGTGTGATTGATCCGGTCA 359645 29 100.0 32 ............................. TGCTACGCGATTCTTTGCGTGGCTCTGGCACC 359706 29 100.0 32 ............................. ATGCATAGCCGCGTGTGCCATTGTCGACGGTA 359767 29 100.0 33 ............................. CCCCATGAGATCAGCTACCACAAGCTGGTCACG 359829 29 100.0 32 ............................. GAAGGCGGAATGATCAAACTTCCCGGCGGGTA 359890 29 100.0 32 ............................. CAAGCGCTACCTGAACCGCGCGTAAATCATGT 359951 29 100.0 32 ............................. GAGCTTTGGGCAAGCTGGAGGATTCGACGGCG 360012 29 100.0 32 ............................. TTTTTCGCCGGAAGTCAAGCAAAGATTCGACA 360073 29 100.0 32 ............................. CCGGCCGAAGGTGGCAGGCAAGGTCAGATGGT 360134 29 100.0 32 ............................. GTTGTTGGGGCCGGTGTTTGCTTCGGCACCGC 360195 29 100.0 32 ............................. GCCTTGAACGCTGGACTCGGCTGCAATACGAA 360256 29 100.0 32 ............................. AAGATTGGATTAAGCCCGGCCACGCCTGCAAC 360317 29 100.0 32 ............................. TGATTGAGTCGAACCCGGCGCGAGGCGTGCGT 360378 29 100.0 32 ............................. TGAAGGGTGCCGAATTTTACGGATGCGGCGAC 360439 29 100.0 32 ............................. AAGATTGGATTAAGCCCGGCCACGCCTGCAAC 360500 29 100.0 32 ............................. TGATTGAGTCGAACCCGGCGCGAGGCGTGCGT 360561 29 100.0 32 ............................. CAGTAGCAGATCAGGACGGGATTGCCTTGGGC 360622 29 96.6 32 ............................T TACATCACTGTTATTAGGTAATGCTAACACAG 360683 29 100.0 32 ............................. TTGGTGCCCTTTTTCGCCTCGGCGGCGGCGAA 360744 29 100.0 32 ............................. AGAGCCGGTCATGTCAGCACCGCGCCATTGCA 360805 29 100.0 32 ............................. CAGTAGCAGATCAGGACGTGATTGCCTTGGGC 360866 29 96.6 32 ...........A................. CGTGTACCGGGGCTGCGGCAGGTGTTGCGAGT 360927 29 100.0 32 ............................. CAATGGGGCACCAAAACCGGTGCTAATCAAAT 360988 29 100.0 32 ............................. CAGAGCCTGCCAGGCCCAGACCTACCCGTACC 361049 29 100.0 32 ............................. GGTACTTTGTACCGCAAGCACTCGAACCGCGT 361110 29 100.0 32 ............................. TGGTTTTACGAGTACGTGCTGACCCCGGGTGG 361171 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 71 29 99.9 32 CTCTTCTCCGCGCATGCGGAGGTAATTCC # Left flank : GTCGTCGCGTCAGAACGGAGATTCACGGAAATCAAGTTCTCAAAGAGATGTTGTCTACGCTCATGCATATTCTGGAGCCGCACTTACCCGCACGCGATGATGATCGGCTAGTAGCAGGGCGCGGTGACGAGGTTTTGGGGCATACTCAATATGGGAAAGATAAATAAATGTTTTTAGTATTGACTTCTACTTTTCTTCCTGACCATCTGCGCGGGTATTTGAGTAGATTCCTGATAGAGGTGGATTCCGGTGTTTATGTCGGCAATATCTCTCGCAGGGTGCGCGACAATATTTGGAAGCGCTGTGCCGAAGCAATCGATCGCGGTAGCTTAACCATGATCAATAGCGATTCCAGTAGAGAGCAAGGATTCGCTGTTAACACTCTTGGTCCGCAGCGCAAAAATATAATAGACTTAGATGGCATGTTGTTACCCGCGACCTTATCGGCTGTAGCGTCACAAAACGACGCCAACCGCTAAAGTTTCCGCAGGTAACGCAGT # Right flank : CACTCACCTGGGCTACTCGAAATGTTGGACACTTAGACTTCAATGATCCTCACTTTGTCGTGAACTAAGTAAAACAAGACGCGCTATTGCCACGGCCCCCGCGACTGGAATTTCACGCGCAAGGCAAAAACGTAGAAGACCCTGATTATTGGTTTATGCCCAATGATTCAACTTACGCTGATTTACGCTGGACGGAACACGCTAAGTTACTGAAAGAATTTGGATTTATTGAACAGCCGCTGGCTAAACCGATCAGGGGCGAAATTTCATACAGTGACCGCCGCGGCTGGAAAGTGACACAAGAGCTAGCTTGGGCCTTGCAAAACCTTAGCGTCAACTAGGCTTTTCACGCATCACCCTGCGAAGATTGATCAGATCGGTTAATGATGCGGTATAGCATCGCTCTAGATAGGCCAGTTCGTCGGTGCAGTTCCATTTTGGAAACCCCGGCATTAACGGCAGCATCAATCGATTGATAATAATCATCGCGCGCGCTAGCT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTTCTCCGCGCATGCGGAGGTAATTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.90,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //