Array 1 27700-27973 **** Predicted by CRISPRDetect 2.4 *** >NZ_RDBG01000050.1 Streptomyces sp. wa22 Scaffold_50, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 27700 29 100.0 32 ............................. GTACGAAGGTGCCGACCTCACCGACGAGCAGC 27761 29 100.0 32 ............................. TCCTCGTCCCTGGAGTTGAAGCTGTCCGGGTC 27822 29 100.0 32 ............................. GGGGCCGCCGCTCTGCGCGGCACCCGCGCCGG 27883 29 86.2 32 ..............T.........C..GT CACGCGGCGACCGGCGCGGGAAGCGTCGCGTC 27944 29 79.3 0 .....T..........A...A.AA.C... | T [27960] ========== ====== ====== ====== ============================= ================================ ================== 5 29 93.1 32 GTGCTCCCCGCGCCCGCGGGGATGGTCCC # Left flank : GTATGGGTCGATTGGCTGCGGACCACCTTCGAACTGCACAACAGCATCCCAACCTGCTGGTACCTCCACTCGCCCGTCGTGGAACACCTGACAGCTCTGTACGCCGGTTGGATCCGTACGTACGCCGGCGAGCAGGTACCGGGCCGTGAGCTCGCGGAGGTCGACTGGATCAACGCCCTGCACGCGCTGACTCCGCGCCTGCAACTGGCCGCCTGTGCCGCCGGGCAGCATGAGCAGCCTCCGCCCATGCCCCGAAAACGTCCCGGAGCGGCAGACGATTTCGAGACCTTCCTCGAGACCTCGCGGTCCACCACTGAACCGGCCCGGCACCCGGCTGAAGCCGACCTCGGCAGACGGCGGGCTGAGAATGCTCTGACTGGCCGTTGATGCAGCCAAGGCGACATGTTCTGATGCTTTGGGATGAAATGGTGGCTTTGTCGAATTCGGTGAAAGTCATGCAGAACGACGCTCTCGGATGACAAACTCGCAGTTCAGCAAGA # Right flank : CGCCTCCGGCTCGGACCGTAGAGACTTCGGCTTCTCGCGCTGCCCAGGAGGCACCAGCCTCAAGCCGCCTTCCGGTACCCGAAGGCGGCTTGTACCCATGATGCGGATGAGTGGGCCGTGAGGTGGTGACCGGACGCGTGGAAGCGATGGCAGCCGTGTGCGGTGGCCTGGTGGGTGGTCGGTGTCTACTGGCTGCACGTGGGCAGGACGGTGGTCACCTGGGTCAGGTGGTCGGGGCGGAGGCGGATTCCAGGGAGCCAGAGCTGTCCCTCGTGGTGCGCGATCCGGATCCAGATGCTGGTGTGCTTGAGGTTCTCATCGGTGACGGTGACGCCGTTGGCGACGAAGCAGGTCGCCTGCAGCAGGTCGTGGTGCCAGACGCGTGCTGCGGAGTTGGCGGTGTTGTACGGGCGGTAGGGGCTGTAGGCCAGAGAGAGTGCGCACAAGGCCGTGCGGGGTCTCTGACATGCCCTTTCGACGTTGTGGACCACAACACCGAG # Questionable array : NO Score: 5.71 # Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 4569-4355 **** Predicted by CRISPRDetect 2.4 *** >NZ_RDBG01000089.1 Streptomyces sp. wa22 Scaffold_89, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 4568 29 100.0 32 ............................. GAGACGATCAAGCTCCTAATGACCCGGACCGG 4507 29 96.6 32 .....T....................... CCCTTACAGAGCAGATAGGCGACAGTGAGGCC 4446 29 100.0 32 ............................. CCGCCGCCCGGCGAGTGCTGACAGTGCTTGCA 4385 29 89.7 0 .........A.......A.....A..... | CC [4359] ========== ====== ====== ====== ============================= ================================ ================== 4 29 96.6 32 CTGCTCCCCGCGCACGCGGGGATGGTCCC # Left flank : CCTTGCCGATGTCGTGCACGCCGGCCAGCCACACAACGAGACGACGTGCGTCGTTCGCGCCCTCCGGCAGCTCGGCGGCTATCAGCCTCCGGACCGAAAGCGGCAACCACTCGTCCCACAACCGTCCTGCTACCGCGGCACTGTCCTCCATGTGCCGCCACAGCGGCAGCCACCCATCGGAGTCCCGATCGTGCTTGGCCCACACCTTGAGCACGGGGCCGCGCAGTCTTGCGCGCATGCCGGTGTGGGAGCCCCCCTCGACTGTCATGCCAGAGGAATATCTGGGGAGGACGCGCATTCGCAGGCGAATGAAGAAAATGCGGAGAATGTGTGCTTACTGTGGCCGTTATTGCCCCGGCCGTGGTTAGCCATCAGTACAGTTGATCAGTTGGGTGCTGATGGCGCTCTGGCGAGGAGGGGTGGAAATGCACTGTATGTCTGATTCTTTCAAAGTGCTCAGAATCCAGTCACTGCTGCGGTAAAGCCGCAGGTCGCGCAGT # Right flank : CTGGGGACGTCGTATAGCTGCGCCGGGGCTTCGCTGTGCAGTGAGGGTCAGCCGAGTGTGGCGGCGAGCTTGCCGGCCTCGGCCTCTTCGGCGGTCATCTGTACCTTCCCGCGGTGTGACACCTCTACCTGGTAGAACTTCTCACCCTTCGGCACGTCATCCACGGTGACGATGTAGGCGCAGGCTCCCACCGAGTACTCGGACTCACCGAGTGATCCGGTTGCGGCTACTTCGCCTGCCGCGTTGTACACGGTCACGGAGGTTCCCCGGGCGATGTCGTCGTAGCCGCCGTTGCCCCGGCAGTTCTCGCCCTCGGTGCGGATCGCACCCTCGGTGAGCGTGAACGTGCCGATCAGGGTGAAGGTGTCTGGGGCGGTGTCGCGGCTTGTGTACGCCCATGCGCCGCCGACCAGCCCGGCTCCGACGGCGAGGCCGAGGAGTGCGGCGAGGATCGGGTTGATCGGCTTCTTCGGCGCGATGGCCGGAGGTTCGGTGGGTGG # Questionable array : NO Score: 5.69 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGCACGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 6644-6855 **** Predicted by CRISPRDetect 2.4 *** >NZ_RDBG01000089.1 Streptomyces sp. wa22 Scaffold_89, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 6644 29 100.0 32 ............................. CCGGACGCCACCCCCGGACGCTTCCGCAAGAA 6705 29 100.0 32 ............................. ACCGGTGGCTGGACGGCCATCCGTGAGGCGTC 6766 29 93.1 32 .............RY.............. TCCATTCAGGTTGCAACTGTGCCCACCGACTG 6827 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 4 29 98.3 32 GTGCTCCCCGCGCGTGCGGGGATGGTCCC # Left flank : GGCCGCAGGCCGCAACTATGGCGGGGGAGAGGACTTCGACGTCCTGGAGACGACCTGGTGACCGTCATCGTCCTCACGAACTGCCCTGCAGGTCTGCGCGGCTTCCTGACGCGCTGGCTGCTCGAGATCTCCGCCGGGGTCTTCATCGGCAACCCGTCCGCACGCATCCGTGACCTGCTGTGAGCAGAGGTCCAGGAGTACGCCGACCAGGGCCGCGCCCTGCTCGCCCACACCACGAACAACGAGCAGGGCTTCACCTTCCTCACCCACGACCACGCCTGGCACCCGGTCGACCACGAGGGCCTGACACTGATCCGCCGCCCGAACGCGAACAGCCCTTCCACTGAACAGAGTCCGAAAAAGGGCTGGAGCAACGCGGCGAAGCGTCGTCGCTTCGGACGGCGGTGACGAGAGATTTGGAATGTTTGGGCTTTATGGCCGTTTCGGTGAAACTACTCCAAAACGAGGGTTGCGCTTAGAAACACTGCTGGTCAGGAAGG # Right flank : CTGTCTCAGCAGCCACTGTTCGCGAGCCCCGCGCCCTCAGTAAAGGACCTCTGCCACCGCGGAACCGCCGTCCACGAACCGCCGGCGGAGAAGCGTGTTCCCGCCCCTTACCATCCCGGTCCGCCCTCCCCAGAGGACCAAGCGCGGCACCCCGGCCCGTAGGGTACCTACGGCCCCAGCAGGGGTCGGAGCGTAGTCGGTGCGACGGGGGCGGGGACGATGCGGCGCTGGGTGAAGGTGACGGTGGCAGCTGCTGTCGTCCTGGGCGTGGGCGGATACATGGCGCAGCCCTACGTGAAGGAGTGGGCGTTGATCCGGAACGCCTGCGACGTGGGGCTTCCCCGGGACACCGTGAAGCAGCTGACGCCGGAGAATTCGCTTCTGGATTCCGAGGAGTCCAGAAGCACGAAGGGGCTGGGCTCCTACGCCTGCGAGGTCACTCTCTCGAGCGGCGACGCGAACGGAAAGCGGTTCGTCTCAATGACCGCGTACACACGGCG # Questionable array : NO Score: 5.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCGTGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCGTGCGGGGCTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 24101-23767 **** Predicted by CRISPRDetect 2.4 *** >NZ_RDBG01000072.1 Streptomyces sp. wa22 Scaffold_72, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 24100 29 100.0 32 ............................. TCGTCGTACCAGTCAAGGACCCGTCCGCCGAG 24039 29 100.0 32 ............................. GCCGATGACCTGGCCCGGGCGCAGCTCTCCTA 23978 29 96.6 32 .........................T... GTCGTCGCGCAGCGCACCCGCACGCGGAACAG 23917 29 100.0 32 ............................. AAGACCAAGAAGGTGAAGGTCAAGTCGAAGGG 23856 29 100.0 32 ............................. CCGCTGGGGAATGGCGGCCACCGCCCGGAGCA 23795 29 96.6 0 ..................A.......... | ========== ====== ====== ====== ============================= ================================ ================== 6 29 98.9 32 CTGCTCCCCGCGCACGCGGGGATGGCCCC # Left flank : GCCACAGGCGGATCGCCTGGGCGATGCCCTGGTTGAAGGGGATGCCGCGCTGCTTGCAGTCGTTCTTGAACTCCCCGTACAGCCCTGTGGGCAGATAGGTGGAGAACGAACTGCCGCCAGTGGTGTCCACGGGGACGCGCTCGGCATCATCTGCACGCCATGCCTGCACGCCTTCGGTCACGGCGTCCTTGATGTCGACGCCCAACTCGGCAGCTCTGACCTTGAGTTCTTGCCGCAAGGCCGCTGGCAGCTTGGCGACTACCTTTTCCCTGTCGTCAGGGGAGTACGGGACGGTCATGCGGTTACCTTACTCACCTCGCCGGGGGGTATGGCGCAGATGCCGTCGGAAGTTCGTGGCGTGTCACCCGGATGGAGCAGGAATGCTTGCGGGTGGGTCGCTCGCAGTGCAGGGCGAATTGAGCCTAGAGGGGTAAATGTCCGAATCAATGAAAGTGCATCAGAATGGGCTCGATCGCTGATAGAACTGCAGGTCAGTCAGT # Right flank : GACGGGTCGACGGGCTGCGACCTCGTCCCACTGTCTAGGACGGCCTCTTTTGGCCCCGGGGGAACGGGTTGGGGTGGACCGGGGTGAGGAACGGATTGTTTTGGCCCCACCTGGGAGTCGCTGGTCTGGGATGTACCCGTTTGGAGTAATGCCGGATTGACCCGGGTTGGTGGCCGGGATCACGCTGTGCGGGTTGTCGGCTGGCCGTGTCAGGAGGCCGGGTTTTGCAGCGTGTTGAGTTGTTCGAGCTGATTCGTCGTGACCGGAGGCTGGAAGGCACGTCGGTCCGTGGGCTGGCCAAGCGTTACGGGGTGCATCGCCGGGTCGTGCGCCAGGCGTTCGACAGCGCGTTGCCGCCTGAGCGGAAGGCGATCGAAGTGCGCCGGTCGGTTCTGGAGCAGGCCAAGGGCTGGATCGACGAGATGCTGCGGGTGGACCTGACCGCGCCGCCGAAGCAGCGGCACACGAACAAGCGGATCATGGAAGGGCTGCGGGACGAG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGGCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGATGGCCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //