Array 1 5950-6313 **** Predicted by CRISPRDetect 2.4 *** >NZ_MDLK01000027.1 Brochothrix thermosphacta DSM 20171 = FSL F6-1036 strain DSM 20171 DSM_20171_contig33, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 5950 36 100.0 30 .................................... ACAGCAAACGACTACGCAAGGAACGACAAT 6016 36 100.0 30 .................................... CGTAGTAGCGACGTACTGAATACCCTCAGT 6082 36 100.0 30 .................................... CCACGTTCCTCATATGTACAATAGTGTTCG 6148 36 100.0 30 .................................... TGAAATATCGAGCTGCACAAGTCAGTAACT 6214 36 100.0 30 .................................... AAAACCGTCAGTATACACACCCGTCATGTA 6280 34 88.9 0 ..........................--.....G.G | ========== ====== ====== ====== ==================================== ============================== ================== 6 36 98.1 30 GTTTTAGAGCTGTGTTAAATTGAATGGTATTAAAAC # Left flank : TATTACTAAAATTTATAAACAGCTAGAGAAACAGTATCATAATAATAAGGAAATCGATCTTATTGCTGATCAATTAGTAGAGCTCCGTCAACTTATAGGCATTCAGTTAAATGACTATGATTTACCGCTACAACTGAATGAAGAAGTAAAACTATCTTCGCTTTATAAGCTGTTTAATGTTACTATAGAGGTTGAAACAGAGTCGATTTTGGATAGATTATTACTACTGATTGATCTTGTCGCACAATTGAAAATTGCTCGTATCATTATTTTGAATAATGTAAGGTGTTATTTTGTAGAGCAAGAGCTTCTAGAAGTATACAAGTACGCACTTTATAAAAACATAAAGCTATTACTGATTGAACCAATCTTTAAAAAAGGCAAATTACAATATGAACGAAAATTACAAATTGATAATGATTATATCGAATTTTGGCAGTAATACCTTCATTTTTGAATCGCGCAACGAGAGCAGTAATGACAAAATTTCATTGTTTGAG # Right flank : GAGTGACGTCCATTGATATAATGGATGTCTTTTTGTTATCTATAACTTTATTATGTCAACTAAATAAAGGGCATTTAAAATAACATGACAAACGTTGTTATGCAAGGTAATCTAGAACTAGATTAACATTACTTAAAGGTGGTTGGAGGATGACTGGATTAAAAATTAAGCAATTTAAATTAGATAAACAGGCGATTAAGCAAATTAGTGATGACTATATTGTCGACTATCCAACTGTTTATTTATTAAATAATGATAAAGAAGCGTATATCGGCGAAACTGTTGCACTGAAGAATAGAATGCGTGCTCATTTAGCCAATCCACAGCGCAGTAAACTTACAACAGCTCATGTCATCAGCCATAATGAATTCAATCAATCCGCCACCTACAATATTGAAACGAAGCTGATTAATTACTTTTTAGCGGATCAAAAATATATCTTACAAAATAAAAGTCAAACGGTTCAAAGTATCACTCATAACTACCATAATAAAGCTTAT # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTAAATTGAATGGTATTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.20,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //