Array 1 179155-177274 **** Predicted by CRISPRDetect 2.4 *** >NZ_LWSK01000002.1 Rubripirellula obstinata strain CECT 8602 contig2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================================================================ ================== 179154 28 100.0 32 ............................ GTTAACGCAATTACCGCGAAACAATCGAATGC 179094 28 100.0 32 ............................ GCAAAGCGCACAACGTGCTCCGGCAGCCATCG 179034 28 100.0 32 ............................ TGTTCAGCCACCGCTATCTACGGCAATTGAGC 178974 28 100.0 32 ............................ ACATCGCGATCGTTCGGTTCGCTGGTGTTGTT 178914 28 100.0 32 ............................ CGATTCAGGCAGCGAATCAAGCTTCGCCAGTT 178854 28 100.0 32 ............................ CCGTTCCAGTACGAAAGCAATAACACTGGCAT 178794 28 100.0 33 ............................ AATCAGGCCGGACGCCACCTCCGGTACAACATT 178733 28 100.0 32 ............................ ACCGACGGGAAATCTACGACAAGATTCAGCAA 178673 28 100.0 32 ............................ AGTTACCGGCGAGCAAGGATGGTTCTCGGTTG 178613 28 100.0 32 ............................ GATTTTTGCGTGCTTTCGCGCGACCCTCCGAG 178553 28 100.0 32 ............................ TTGATAAAACCAACACGTCATTCCCTTTCGTT 178493 28 100.0 33 ............................ GTCGATGATGTCGCCGCTCAATTGGCGGAATAC 178432 28 100.0 33 ............................ GCTGTTTGGTACTGCTAACAATGCAGGATCAAT 178371 28 100.0 32 ............................ TCACGGTCCGCAAAGTACTCCCAAGGCCCGTT 178311 28 100.0 32 ............................ TCACGGTCCGCAAAGTACTCCCAAGGCCCGTT 178251 28 100.0 32 ............................ TCGCGGTAGGTAAACGTGGCATTCGTCAAACG 178191 28 100.0 33 ............................ GCTGACAAAGGTACGCGTTCTAATGCGTGTCGT 178130 28 100.0 32 ............................ CCCCATCATCACAAACATAGGATCCGCATGCG 178070 28 100.0 32 ............................ ACCATCGTAGAGGCTACGTGAATGCGGAACTT 178010 28 100.0 32 ............................ GCTCGCTTGGTGTCCCGCCGGCGAATTTGACT 177950 28 100.0 33 ............................ TGTATCGGCGGCTCGAAAAACTAGGTGTGCCTT 177889 28 100.0 32 ............................ ATTGCTAAGGCAGCAAGTTGGGAAATCATGTC 177829 28 100.0 32 ............................ AAAGGACTGCGTCTGAATGTGGAGTTGCCATT 177769 28 100.0 32 ............................ TACCTGAAGCTGCTCAAGGAAACCGAAGGCAA 177709 28 100.0 32 ............................ ATGAATTGAAATCGGCAAGCGTGGCTAAGGCT 177649 28 100.0 32 ............................ TTCTTTGGAGTGCGCGACAGACGAAAGTGCCG 177589 28 100.0 33 ............................ AACCCGCGCCATCGATCATCCGCGACACTGCAC 177528 28 100.0 32 ............................ TACAGCGGCGCACCGAACAGGGCTAGGCAAAT 177468 28 100.0 32 ............................ CGCCAGCCGATGCAAGGCTGACGGGCTCTATC 177408 28 100.0 80 ............................ TACAACAATTCGCCGATGGCGGCACCCGCCAACGTTCGCTGCCGACCAGGCATAAACACGGCGGAGGGCCGCCATGCTAC 177300 27 75.0 0 ...............A...-.G.C.GTC | ========== ====== ====== ====== ============================ ================================================================================ ================== 31 28 99.2 34 GTTCGCTGCCGAGCAGGCAGCTTAGAAA # Left flank : GATGATTTGTTGCAATTGAACTTGTCGAACCGTCTTTCGCGGCTGCTGGACTATGTTCATTTGACTTCGGTGCGAAAGCTGGAGCGAAAGATCAATCGCTATGCCGTTTACAAACGTTGCCAAACCAAGAGTTCGCGAGACCGATTGATTCGGCGTCAAATGAAGCGAAAAGGGCTTGATCAGGCCACGGCACAGGCCGAGTACGCAACGTTCAAACCACGGTATTCGCAATTGCCTTACGTCAACATGCGAAGTCACAGTACAGCCCAGCGATTTCGACTATACATCGAGCGCAGCATGGCCGAAGCTGGAGAGGATTGGTGCTTCAGTACCTACGGTTTAAGTGGAACGACGGCCGTTCCAGAGTTTTAACCCTTTTTCCTAAGAGTCGAGAAAACATCGTAAAAACATGCCTTCTTCGATCATTACCAAAAAAGGGTCGCACCACCCAAGTCGTGATCCACACCGCCTTTCACGTTGTTTCTACCCAGAGAAGGCGA # Right flank : TTGCCACCTATAGTCTTGCCAAGTTTTGAGCATGTATCCCCCCGGCACCTTTTTTCCGACGCGTCGGAAGCCTGCGGCTCAGGGAACAACTAGATGGTTGATGATCTGACTCAACAATTTTCGGCGCATGCGTTGCGCAGTAAAAGTGAAAACGATGTTGCGCTGAATACCAGACTGAATGACGGCCGCGAATCATCGTTTTGCCCCTTCATCGTTTTGCCCAGAAAATCAGCGGACTAAGTAGCCCGCGAAAGGTCTTTGCTTCGGTCTGGCATGGGTAGCTGACAAGCATTAAAACCACTGCTTCGTTGGTGTCGTTTGCCGAGGGAGTAGGGAAATGTTGGGGAGTAGAGAAATGTCAGATTCTAAACCAAGAAAAGTGTTTTTTAGCCGGCAACTGCCTGGGGTGGCACTTGATCGATTGGCGGCGGAGGCCGATGTGACGATTTGGCCGAAGGCTGATGCGCCGACGCCGGATGAATTGTCCGACGTGGTTCGAG # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:-0.10, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGAGCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCGCTGCCGTGCAGGCAGCTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //