Array 1 2191-6846 **** Predicted by CRISPRDetect 2.4 *** >NZ_SRSF01000013.1 Lewinella litorea strain HSMS-39 contig13, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 2191 30 100.0 36 .............................. GCTTGTACGCCAGCTGGCGACGTGAGGCCAATTGCA 2257 30 100.0 38 .............................. GCAAATCTCCCATTTGCTATGATCGCCCAACCTTTCGT 2325 30 100.0 34 .............................. ATCGGTACCGCCAGCGTCGAGATATCGCGCAGGG 2389 30 100.0 35 .............................. CGTTCCACCACTCTTGGAACGGGTCGTAACTGCCG 2454 30 100.0 37 .............................. CGAATACGACCAAGCGTGTGCCGCGATTGACGCGCTG 2521 30 100.0 36 .............................. ATGTAGAATTTGCCGATCTCCGGCTGGGGGGTTGTT 2587 30 100.0 35 .............................. TGGTATCGGTGCTGGTGCCGGACTTGTCGAGCACC 2652 30 100.0 36 .............................. TCCAAAGCGGGTGCGGCCTATGTTCTGCCGGCGCGT 2718 30 100.0 36 .............................. TATGGGGCTGTATGGCTCGGTACTTCTTACCGTCGT 2784 30 100.0 36 .............................. GCGTGGAACACAGCCAACGTGACCACCTTCTCTTTC 2850 30 100.0 37 .............................. ACAAGCGCAGCGCGGCACGCCACCGCGGGCTGCTCGA 2917 30 100.0 36 .............................. CCGGCCGTACAGTGATCGGTAGCCAGCCGCAGATCC 2983 30 100.0 36 .............................. TTGTATATGCCACCGTCGGCCCAATATCCTTGGGAT 3049 30 100.0 36 .............................. TCGGGATCTATATCTCGCTCCATCCTGAAATTCTTT 3115 30 100.0 36 .............................. TCTTCCGCGAAGCCCGACAGCCTCCGGTGTCCGGCG 3181 30 100.0 36 .............................. CTTCCTGTACCCCGTCGCAGGGGGCCACCACCCGGT 3247 30 100.0 35 .............................. AAGACAAAGGTTCGCCACTCGCTGCGCTTGGTTTC 3312 30 100.0 36 .............................. TCAACTGCTGGCGAACGTTGGATTTCACCATGTCGA 3378 30 100.0 36 .............................. ATGATCGTTAGCCCCGCGCCGCTGTGCCGCCCAAGG 3444 30 100.0 37 .............................. CGCTGATAACCGTAGGTAGGGCAATGCACGTCGACCG 3511 30 100.0 37 .............................. TGAAAGAAATATTCCGCCACAACCGTAACGGGTTCGG 3578 30 100.0 35 .............................. AGTGTTCTGGCTGCTCCCTGACGCTGAACAACCGG 3643 30 100.0 37 .............................. AGTAAAATCAGGTGGACACAAGGCCCGTTCGGGTTGT 3710 30 100.0 36 .............................. ACCTCCAGCGCGTGGTGCTCCCTCGTCCCTCCTTGG 3776 30 100.0 35 .............................. AACGTCCTATGCGGTCCGATTTCCTCGACTTCCTT 3841 30 100.0 36 .............................. CCGTAGGTAAGACCGGCCAGCGTTTTGGCGTCGCCG 3907 30 100.0 36 .............................. CGGATGCCAAAAAGATCACCCGCGCGGTCCGGGTTG 3973 30 100.0 36 .............................. CCCTGTAACCGCGCAGTCTGACAACCCCGACGCGCA 4039 30 100.0 36 .............................. CCGATGAAGGGGATGGTGATAATCTTATCCATGAAA 4105 30 100.0 36 .............................. CTTACTCCGAATTTGATTCGCCCGATCTCCCCGGCT 4171 30 100.0 36 .............................. ATTTCTGCGCGGAAGATGCACCCGGAAAGGCCTTCG 4237 30 100.0 37 .............................. AACTATCGCCGTCCAATACATGGGGCAAAACCTCGGA 4304 30 100.0 36 .............................. TGGGTGAACCTATTATAATCAACTCGGGCTATCGCT 4370 30 100.0 36 .............................. ACTTTGATGGCGGTACCGATTTTCAAGCCCACTATT 4436 30 100.0 37 .............................. AGAAGGAAGGACCCCGGCCGTTGACGCGGCCGGGGTT 4503 30 100.0 34 .............................. CCTTGTGCCGTGTCAGCAAGGCGGGACAAGTCCA 4567 30 100.0 38 .............................. TTTATTTTGAGGGGTAGAGCGAGTTGTTCAATAAGCCA 4635 30 100.0 36 .............................. GCGAGACGATACTACTGTGTATGTTCTCAAACATGG 4701 30 100.0 34 .............................. CCGTATTCCACCCCGACACGTCCAGGAGGGTGAG 4765 30 100.0 36 .............................. CCGACGACGGACTCAAGTCCCTCCTGTTTTGGATGG 4831 30 100.0 37 .............................. TGAGAGACGGGGTGGGTTAATGAACGTGCGGGGCGGT 4898 30 100.0 37 .............................. TTGGCACCAACGTGGGCCATTTGCAGGAGCGCGGAAT 4965 30 100.0 35 .............................. CGCGGTGAGCGTTCCAGCGACGCTTTTTGCCGTCG 5030 30 100.0 37 .............................. CTTGCTCGAACTGGACACGCAAGGCGAGCTTGGCAAC 5097 30 100.0 37 .............................. ACACCAAGGTGGATTTCACCATCCGGTTCCGCAACCT 5164 30 100.0 35 .............................. AGGGAGAACCCACGATTGTACCGTTTCCCTCCGCT 5229 30 100.0 36 .............................. CAATTTCCGCTCGTCGTACATCCGTGTTACGCTCCC 5295 30 100.0 36 .............................. CCGTCACTGGCATAAATTCAGATCTGACGCTCCAAC 5361 30 100.0 35 .............................. ATGCCACGGTCGAAGTTGATGCGAACCGGGAAAGT 5426 30 100.0 36 .............................. AGAAGCGCATCACGTCGGTCAGCTTTTCGGAGTTGT 5492 30 100.0 35 .............................. AGGAACTTAAAAAACACTAGCCATGCCCCACTTCG 5557 30 100.0 36 .............................. TCCGCCAACGCGCCGCAGCGATTGCCACCGCCGCCT 5623 30 100.0 36 .............................. CGTAGTTACTCCGACGTTGGGGAGCGTTAGGAACTT 5689 30 93.3 36 ...................AA......... AAGGTGCTGTGGGCGGTGTTGTGCACCACCATATGT 5755 30 100.0 36 .............................. TGGGTAGGCTTGTTCTGCGATGATGGCTCCCGCGAT 5821 30 100.0 36 .............................. AGGCCGACGTGCAACGGATGTACCCCGGCTCCACCC 5887 30 100.0 36 .............................. GAAAGACCATTACGGACGAATACCTGGGCACGCTGG 5953 30 100.0 35 .............................. CGGCTGAACCGGGCGGCAAAATGTAGGCGCGCGGC 6018 30 100.0 38 .............................. CCCTGTGACTGCCCAGTCCGATAACCCCGATGCGCAAA 6086 30 100.0 35 .............................. GTGGGCTACTGCAAAGGGTCGCCGGATTCTACTGG 6151 30 100.0 37 .............................. TGGGGCAATCGTTTCGGGAATGGGGTCCAGGCTGCCG 6218 30 100.0 37 .............................. ATGGAACCGGTATCGTACGGGTCGAACGGGTGCCAGC 6285 30 100.0 35 .............................. TATAGTAGGTGTGCCAGCCGGAATTGTGAGCGTGC 6350 30 100.0 36 .............................. GACGGTGCCGCCCGCCCCCAAAAGCCGAAAAAACCC 6416 30 100.0 38 .............................. TGGGGTAATCGTTTCGGGGATGGGGTCCAGGCTGCCGG 6484 30 100.0 36 .............................. TACCTGAGTCCGACTGTTTTGGAACCACAAAACCCA 6550 30 93.3 37 ...............T......G....... TTTCGGAAGAGGAGTACGACCGCAAACTGAAAAAACT 6617 30 96.7 36 ...............G.............. TCTATCTACTGGAACACCCCGCAGCCCTGCGGGTAG 6683 30 90.0 36 ...............G...AA......... ACACGAAAGACAAAGATTATAAGGCGGTATTTCATG 6749 30 96.7 38 ...............G.............. AGATAAAGCCGGGTGGTACCACCGTGGGTAACCTCCTG 6817 30 93.3 0 ...............G.............C | ========== ====== ====== ====== ============================== ====================================== ================== 71 30 99.5 36 CTCGTAATTGGATCAAGTTGGGATTGAAAT # Left flank : CTACAAAGCTTACAAAGCCTACTGAGTCATGTACGTAATCGCCGTTTACGACGTCCGCGCCGAGCGCACGGGCAAACTCCTCAAGCTCTGCCGCCGTTACTTGACCTGGATACAAAACAGCGTCTTTGAAGGGGAAATTAGCCCGGTGCGTCTGAAGGAACTCAAAATTGAAGCTAAAAAACTAATGGTTGACGAGGACAGCCTCATTATCTTCAGCAGCCGCGAGCCCCGCTGGCTGCAAAAAGACGTCATCGGCCACGAACGCAATTCAACGGATAACTTCTTCTGATCCGTCGGTCGGACCAGTAGGTGGGTTCCGCAGCACCCCGGCCCCGCTTGAAAGCTGCAAAGTTCTTTGACAATCAGGGTTTTATGCCGTCCGTCGCTCCCCGGCATTTTTCGTATTTTTGAGCGTCGGTACGCTTACTCAGGCTGTCTTCGCGGTGAATCTCAAGCTAAGTGCTTGATTTACAATTAAGATAGCCCGGACAAGGGGATGG # Right flank : CCGGCACCGAACAAGTCATACACCGACAATTGAGAAGGGGAGGAAACGTTGAACTCTACTTAATATAAGTACAAACATGTAGCTCAAAAGTAATTCAACCTAGTAGCCAGGTAATGTCCAACGTCTCCATGAATAAACCCCCACCAAACCCACACCCCCTTCACTCACCCACCCCCACAGCAATCCCCTCCAATCCAGCCTCCAAAAAGTCTTGGTCCAGCCAGCGGCCGCGAATCATGACGCCGGCGGGGTGCTGCAGGTGGTCCATGTCCTCTAGGGGATTTCCGGATACCAGCATCAGGTCGGCCGAGGCGCCGGGCTCGACGGTGCCAAATTCACCGGCCCGGTCGAAGTACTGTGCCGGGTGGACGGTACCCATCCGGAGGATATCGTAGGCGGACAGGCCGGCGGCCTGCAGGGCATCGATCTCGTGGTGGATGGAAAATCCGGGGACGTTGAAGACCTGGGGTGCATCGGAACCCAGCAACAGCAAACCCGTT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:0, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCGTAATTGGATCAAGTTGGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.40,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA //