Array 1 1599313-1597095 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABMIQ010000001.1 Bifidobacterium pseudolongum isolate MGYG-HGUT-02365, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 1599312 36 100.0 38 .................................... CGATGAAATACCCTTCTTGCTGTGCTTGCATTCGCCCC 1599238 36 100.0 39 .................................... CGCCAGCCTCGTCCACGCGTTGCGCGGTGAACGATTGGA 1599163 36 100.0 38 .................................... GAGGGATATTGGCCACTGCCCGAATCCGTTGTGCGGCG 1599089 36 100.0 36 .................................... TATAATAGGGTAGGCAATAGAGCTGGTGGGTGTGAC 1599017 36 100.0 35 .................................... AATATTTTCTACAAGCACGCCGGTTCCATTACGCC 1598946 36 100.0 36 .................................... GACAATCCGTTGCGCGACATGGGCGTGCCGAACCAG 1598874 36 100.0 35 .................................... CCGCCGGACGTCCGCGCGCAACGCGGCGGGGCATT 1598803 36 100.0 38 .................................... GTATTGCGGACGCTCTCAAGGTTAGGGACTTACGAAAA 1598729 36 100.0 38 .................................... GCAATCTGCCGTCCATGCCGCCCGGAGACGACCCTGCC 1598655 36 100.0 36 .................................... GGAGTGAGCGGCAACCAACTCACCCACATGGCCAAC 1598583 36 100.0 35 .................................... CTGCGTATCCGCGAACGGCACGAGACCGCGATGCG 1598512 36 100.0 37 .................................... ACCCAAAACCTCGAACGCGCCCTGACCGAATTGGGCT 1598439 36 100.0 37 .................................... ATGCTCGGTTGGCTCGCCTACATTCCCCTCGCCACCT 1598366 36 100.0 39 .................................... AAACTACCGCTCGACCTGAGCGTCGACGATTTCAAACGA 1598291 36 100.0 36 .................................... GGGCCGCGGGAAAAGCCTGCCGGCAGACTGTCACTG 1598219 36 100.0 37 .................................... GTTCCCTACGGTTCCGACCGGCTCGTGTACGGCGTCT 1598146 36 100.0 36 .................................... TGTCTGATGGCGCACCCGTACGCGCCCTCGTTCCAC 1598074 36 100.0 37 .................................... ACAAGGCCGCTGGGCAATGCGAATCCTGTTACAAGCG 1598001 36 100.0 37 .................................... GAGGGTCTCTACCGCGGGCATGTGCAGGCCGCTTGGA 1597928 36 100.0 37 .................................... GACGGCAGCGAGCACACATACCGGCACGTCACCGCCA 1597855 36 100.0 36 .................................... ATTGACCAAAACGAGTTCAACCATCGTACGTTCAGC 1597783 36 100.0 38 .................................... TGGTTGAACACGGGGCGACCCTCATTGCGCGCAGCCTC 1597709 36 100.0 38 .................................... TGCATGTATGTGCTCGCCACCGTGGAAAGCAATTGCAC 1597635 36 100.0 36 .................................... GGGACCGGCAAACCCATGTTCTCGCAAAAGGGCAAT 1597563 36 100.0 36 .................................... CGCGAACTGCTTAATGATCCATCCCGTGCGCAGCCG 1597491 36 100.0 35 .................................... GTGGTTGAATCGGTGATCCAGTATGCGCGGTGGAT 1597420 36 100.0 38 .................................... ATCGACCCGCGTGACGGCAATATCACCGTGCGCCCGCT 1597346 36 97.2 36 ........G........................... ACGCCCGAGTTCGAAGCGTTCTGGACGGCATACCCG 1597274 36 97.2 35 ........G........................... CGGCCCGAGGACGCGGCCCGCATGGCACAGACACA 1597203 36 100.0 37 .................................... GTGTTCGCGAAGACCGTGGACACCGAGATCCCGGCGA 1597130 36 91.7 0 .....T..........T........C.......... | ========== ====== ====== ====== ==================================== ======================================= ================== 31 36 99.6 37 ATCTCCGAAGTCTCGGCTTCGGAGCTTCATTGAGGA # Left flank : ACGCACTTCAACGACGTGCGCCTGAAGAACTTCATCGAGATGCGGCACTGGGATTCGCTGCCGATCGAGCGCGCGGAACTGCTCACGCAGATCGTGAGCAACCTGTTCTACGATGTGGAGCGCCGAAACAGCCTCGAATCGTACTTCAGCGGACTGACCGGCGAAGACGTGCACGCCGCAAAGGCCGTGCTGCAGGCGCGCGGGGGAGAGGCGAAGCCCTACGACCAGCCGATGGACTACTGGGCCGAAGTGCTGGGCGTCGGGGACACGCTCGCGGATGTACCGGGCGACGCGAAGTGGCCGGAGGTGCGGCAGGGGTAGAGGCTATCCCGTGCGAGGACTGCATCATGCAGCATAAAGCGGGGAAGCTCTCGCATCAATACTTTGTAAGGGTTTGTTGAGCTTGTGTAGATAAATCAGTCGTTTGTATCACGTCAATTTGTCTACCTCTCGCAAAAGCGCTTATCAGACTATGTGTATCAGTCTGTATTATGGCTACT # Right flank : GATATTCAAGTAGGATATTGGAGGGTAAAGCCGAGGTCATCTTCGAAGTTTCGGCTTCGGAGACTCGCGGAAAATTAGGCATCGGACACCTGAACTTATAGTCAGTTGATCGTCTTAGAAATCTTTGCTCTGACTTTTCTTGTTTTTTACTTTCGACATGATTCAAAGCACTCTGATTTTTATCTAAGCAAAAATGAAGTATGCTGAGAATAACGCAATGAAGCGAGGTGAAGGGTTGGAAGATACATTACCAATTAGTCTCATATGTGACTTTATCTTTTGTCCACGAAGGGCATGGTTAGAAATCCAAGGTGAGAAGATTGAGTCGTTACAGATGGAGCGCGGTTTTCATGACCATCGTGCAGTGGATGACGCCAACGGTGGCCGCGGGGATACTGACTATAGGGCAGTTAATGTGAATCATCAGGGGTGGGGACTGTCGGGGCGATTAGATGCGGTCCGGTTGAATGAAGACAACGGTGTGATTATCCGTGAATATA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCTCCGAAGTCTCGGCTTCGGAGCTTCATTGAGGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.10,-7.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA //