Array 1 30401-31013 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUES01000053.1 Eisenbergiella sp. OF01-20 OF01-20.Scaf53, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== =================================== ================== 30401 31 100.0 34 ............................... GGAATACGTACCGGAGGGATTCGGGACTGGCGAC 30466 31 100.0 35 ............................... ATGAAAAAGCCGTGAATCAGCCATTTTTGCGGGTT 30532 31 100.0 33 ............................... TTAATTCTTCGGTCGTCAGTCCAGCATAAGGAT 30596 31 100.0 33 ............................... TAGCATTATAGCCAATGCTACGATAATACTTTG 30660 31 100.0 34 ............................... TGCATTACAACAGAGCGAAGGTATACGGGGAAAT 30725 31 100.0 33 ............................... CCTGATACTCTGCATAAAGGACCCAAGTTCCAC 30789 31 100.0 33 ............................... TTCGAGAAGTCCGCCGCCTTCAGCTCAGACCAT 30853 31 96.8 33 ...........T................... ACTGTTAGAGAAATCACAACCATTTTTGTACAT 30917 31 96.8 35 ........................G...... CACTACCCATGTGCCGCTATCGCCATCGGTTAGTT 30983 31 74.2 0 .........C..C.C.T.....T.CCA.... | ========== ====== ====== ====== =============================== =================================== ================== 10 31 96.8 34 GTCACGGCTTGCGGGCCGTGTGGATTGAAAT # Left flank : TCCCGTACCGGACGGACTGGAAAGCCGGAGCCTTGTGCCCCTTCTGGAAGGCCATGAAGACGGCTGGACGGACGAAACCATATCCCAATGGGGCGGACGCAACCTGATGATAAAAAAAGGGGATTTGAAATATCATTATTACGGGCAGGACGGTTCGGAGCTGCTGTTTGATTTGAAAAAGGATCCGGAGGAGAACAAAGATTTCAGCAGGGAAACGGAATATGAAGAGATAATGGCGTATTTTGTACGGCGGAGGGGAGATATAGGATTTCCATAAAAGGAGGTGGATCCGGTGTTGGGTTGAATGGCATGAAGGGGGATTTATACAGGTGCGAATCCGAAGTGCACAGGAATTTACTGGGAGATTCGCACCTTGAAAGTTTGAAATATAGTTTGTATGCGGTTATAATGGTGTTAAGAAAGGGAAGTGCTGAAGTGGAATTTGTGTAGATTAATGAATAGAAGAATGATATAATAAACGATAGTTGTGATGTTTTGCT # Right flank : TAAATAATGCATACATAAAAGCAAAAGGAGACCCAAAATGTCTGAACGCCCGCTCCTGAATCAAAAGCTGGATGGCTCCACGTTTCGCAGCTATTACTACTTAAAAGAAGAATTGGTATCCTTTTGCAGGGAGAATGGTATACCCACATCCGGCAGCAAAGAGGAGTTAACGGAAAGGATTGCTATTTACCTTGACACAGGAAAGGTAAATTATGTAAAAAAGCCATCCAGACACAGGAACGACGTTGGAATCATAACGGAAAATACGGTTATTGAACCCAATTTTGTCTGCTCTGAAAAGCATCGTGCTTTTTTCCGGGATAAAATCGGGAACAGCTTTTCTTTTCCCGTGGCATTTCAAAAATGGCTGAAAACTAATACCGGAAAAAGCTATGCAGAGGCTATTGAAGCCTATTATCGGATTCTTGAGGAAAAGAAAAAGGGGAAAACGGTTATCGACAGACAATTTGAGTATAATACCTATATCAGAGATTTTTTCG # Questionable array : NO Score: 6.10 # Score Detail : 1:0, 2:0, 3:3, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACGGCTTGCGGGCCGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.80,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : NA // Array 1 2615-2257 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUES01000064.1 Eisenbergiella sp. OF01-20 OF01-20.Scaf64, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ================================== ================== 2614 32 100.0 32 ................................ GAACTTTGACCCGGAGATAGAGGGGGAGACTA 2550 32 100.0 33 ................................ CCCTATCGTAAATAATCTGTGTCACCCGGAATT 2485 32 100.0 34 ................................ AAAGGAATCAGAACTGATAAATTACCATCAGAAT 2419 32 100.0 34 ................................ TACCTTAAAACAGTCCTGTGCTTCCCTCTGAAAC 2353 32 96.9 33 ...................T............ ACCGGACGATTCACAATCCAGTCACGTATCCTG 2288 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ================================== ================== 6 32 99.5 33 GTCGAGGCTTTCACAGCCTCGTGGATTGAAAT # Left flank : CACAACCCTTTGCGGGTTGTGTGGATTGAAATTCGCATAGTTCTCCTTTAACCAGTCCTCAAGCCTGTCACAACCCTTTGCGGGTTGTGTGGATTGAAATGCATCAAAATATGGTTATTAGCCCTAAAAATAAGGTCACAACCCTTTGCGGGTTTAAATCCGATTATGGTATCGGTGTTGTCTTTACAAATCGTCACAATCCTTTGTGGGCCTTGTGGACATTTATTATTGTGGTATACTAATAAAAGTGAATTAGTTTATGAGAAGAAAAATTGTGCTGTAATAGTTAAGTATGGTAACTTTTAATAACGAGTGGGTAGAAAATTTTATGGTGCGAATGTGAAGTGTACATAAAAACATGGGGGGATTCGCACTGTAAAAAAACTGAATAATGCATGGATATAATTGTTTTATAAATACATAACAAACAATGGTTAATGATTTTATGAAAAGAGTATAGTTTTTGCCTTTATGAAGCATGATTTTTGATGTTTTTTGCT # Right flank : TCGATTTTATCTGTGTCAATCCTCATAGTCTCTCGTCGAGGCTTTCACAGCCTCGCCGTACGTCTGTTTTGCCGGTGATTACCTAATTGAAAATCAGATGAATGGAGGATGGAAAGAGGGTTTGTGATGAAGGCTCGTTCAGAACCTCACTTTCTGTTTCTGACAAAAAATAACGTATTATGGACTGTATCCCTGCTGATTGAGGCAGGTGGTACCAAACTTTTTTATCCACACCCTGGAATTCAGAATAAGGCAGATTTCAGACTGCCTTATCTTCCGGGGAAAACCTCTGTAATTAGCCTGTTCCCGTCCTGATTCTGTAATCTCTAAACCTGCGGTTAAGGGTTGACATTGTCCCGCGTCTCTGCCGTTTGCGGCCTCATAAAATCCGGTCAAAAATAAAAAAAATTTGAAAGGGATAGATTTTCCCTTCCTTTTACGAATCAGATAGTGAAAGGAGTAAACCAAAGGATAGAAAAAAGAGGCTGCAGACTCGGCTT # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAGGCTTTCACAGCCTCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGAGGCTTACGTAGCCTCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.60,-4.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 3460-3015 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUES01000064.1 Eisenbergiella sp. OF01-20 OF01-20.Scaf64, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================== ==================================== ================== 3459 34 100.0 35 .................................. ATATCCATGGCACCGGCAAAGGGAAGGATTTTACC 3390 34 100.0 36 .................................. TTTAAATGTCATGATGTTTCTCTTTCTCCCGGCATA 3320 34 100.0 33 .................................. AGGCCAGTAGGCCGGGAAGGGGAAAGGATGAAC 3253 34 100.0 34 .................................. GATGGTGTTGGTCACTGTAAAGATGGAGCTGTCG 3185 34 100.0 35 .................................. TGCAAAAAATTGAATATTCATCGGGATTCTGCATC 3116 34 100.0 34 .................................. TCGCATAGTTCTCCTTTAACCAGTCCTCAAGCCT 3048 34 100.0 0 .................................. | ========== ====== ====== ====== ================================== ==================================== ================== 7 34 100.0 35 GTCACAACCCTTTGCGGGTTGTGTGGATTGAAAT # Left flank : ACTTCAAGCCTGCGCTAAAGCAGAAGTTATACAGGCGGATATGGGAAGCGTTGAAAGAAGGCGGAACTTTTATAGAAGCGGATTATATTGCCTGCTGCGAGGAAGAGGAAACATTATTAATGGGTCTTTACGATTCCAAGCGCGAAAAAGAAAAAATCCCGGAGAATGTTTATGTCCATTTTGATACGCCGCTTACCTGGGAGCACGAGAGAGAAGCCCTTTCCGGGGCGGGCTTTACAGGCGTGGAACTTATCTGCAGTATCGAAGGGGCAACCTTCATAAGAGCGGAAAAGTAGAAGAATAAAAAGAAAAACATGCTGATGATAGTAAGGTGCGAACCCCAAGTGCACATGAATTTACCGGGGGATTCGCACCTTGTTTTGTGTGGAAAACGAGGTTTTTTTGACGGTTTTAGAGAGAAAAAGTACGAATAGGATAGATTTTCGGTAGTTTGAACAAGGAAAATGTGTTAGAATGAGATGAAAACGTTGAGTTTTGCA # Right flank : GCATCAAAATATGGTTATTAGCCCTAAAAATAAGGTCACAACCCTTTGCGGGTTTAAATCCGATTATGGTATCGGTGTTGTCTTTACAAATCGTCACAATCCTTTGTGGGCCTTGTGGACATTTATTATTGTGGTATACTAATAAAAGTGAATTAGTTTATGAGAAGAAAAATTGTGCTGTAATAGTTAAGTATGGTAACTTTTAATAACGAGTGGGTAGAAAATTTTATGGTGCGAATGTGAAGTGTACATAAAAACATGGGGGGATTCGCACTGTAAAAAAACTGAATAATGCATGGATATAATTGTTTTATAAATACATAACAAACAATGGTTAATGATTTTATGAAAAGAGTATAGTTTTTGCCTTTATGAAGCATGATTTTTGATGTTTTTTGCTGTCGAGGCTTTCACAGCCTCGTGGATTGAAATGAACTTTGACCCGGAGATAGAGGGGGAGACTAGTCGAGGCTTTCACAGCCTCGTGGATTGAAATCCCT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACAACCCTTTGCGGGTTGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.94%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.40,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.5 Confidence: HIGH] # Array family : NA // Array 1 16159-15659 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUES01000054.1 Eisenbergiella sp. OF01-20 OF01-20.Scaf54, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 16158 32 100.0 34 ................................ CTATAATAAAGAGGAATAATACATTTCTGCTTTT 16092 32 100.0 36 ................................ AACTTTATTTCTTGCAGAATTCAATAGAATTGTATC 16024 32 100.0 34 ................................ TTGTGCCCTCCTGTATAATAAACTCCACTGCTTC 15958 32 100.0 35 ................................ CTCCTGTACCGGACATTGATGTTTCTGGTATTTTA 15891 32 100.0 33 ................................ TCCTGGGCATGAATCCAAAAGCAATCAATGATT 15826 32 96.9 34 .......................A........ TGGGATAAGGAAGCTGGTTCGGTGCCTCGTCCTA 15760 32 90.6 37 A.......A.......T............... GTGTATGGACAGTTGCATCGTCATGTATGTAGACTGT 15691 32 78.1 0 ........A.ATA..A....A.A......... | C [15661] ========== ====== ====== ====== ================================ ===================================== ================== 8 32 95.7 35 GTCGAGGCTTGCGTAGCCTCGTGGATTGAAAT # Left flank : CGGTACAGCCAACGGTACAGCCGCTTCATATAGAACTGCTGAGGTATGATATTATTACAATAAGATGTGTTGAAATGAATAGCCGCCGATGCGGTATTATAAAAAAGAGCCGATTGTAGAAAAAAATAAAGAAAATTCATATGCGTGGGATGAAAAAAGATATGTAAATGCGGCTGCCGAAATACGAATTACCAAATAGTTCCATTGGAAAAGATTATATGTTTTATTTAGTGATGGTGTATAAGAAAAACAGAATAAAGAAATGAGGATGGTTTCTATAAACTATAAAAAATATTATTAGTACATGTTATAGTACATAATAATCCTGGGTGCGAATATCAAGTGCACATGAAAATACCGGGGGATTCGCACCAAAAAAAGTACTAAAATTTTTATGGACATAATTATTTTTAAAGTTTATTATAGGATGTAGTATAGTTGTTTGTAGAAAGTTTATAGTTTTAAATGTATATTGAGTGATTTTTTTGCATGGTTTTGCT # Right flank : ATAGTCCCCGGATTGTTGTCGTCATCAAGATTACGCAACCCTCGGCACATTGAAATAACGCAGTCCATTTTACAATGTGGACACATGTCCACATAAATCCGCCTTGCAGATTCGCCCGAACCTTTATATGATGGACTTATCAGAAATAACAGGAGGACGATCCATGGATCAATTATTATACGGAGCGGCATATTACGAGGAATATATGCCCTATGAGAGACTGGACAAAGATATCAGCATGATGAAAAAGGCCGGGATTAATGTAATCAGGATTGCGGAATCCACGTGGAGTACCGAAGAACCGGAGGATGGCGTATTTGATTTTTCCCATGTGACAAGGGTACTGGATGCCTGTGAGCGTGAAGGGATTCACGTAATAGTGGGAACGCCCACATATGCCATACCTGCCTGGATGGCAAAGGCCTATCCGGAAATTATGGTAACGGATCGAAGCGGCAGAAGGCCTTATGGTGCCAGACAGATTATGGATATCACCCATC # Questionable array : NO Score: 9.05 # Score Detail : 1:0, 2:3, 3:3, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAGGCTTGCGTAGCCTCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGAGGCTTACGTAGCCTCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.60,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 22434-22071 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUES01000054.1 Eisenbergiella sp. OF01-20 OF01-20.Scaf54, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 22433 32 100.0 35 ................................ CCGCAGTTCTTCCAGCGTGGGTTCCGGCGCGGGTT 22366 32 100.0 34 ................................ TGGTTGTGGCGGCAGGTATTATCATTACAAAATA 22300 32 100.0 34 ................................ TGCCACCTAATCACCATCCTTTCCCCCACGAAAT 22234 32 100.0 34 ................................ GCCCGACAAAGAGTACATAGAGCAACTATAGCTT 22168 32 100.0 34 ................................ ATCCTCAAGACCTGTAGTAATGAATCTCGCATAG 22102 32 93.8 0 .....................C..G....... | ========== ====== ====== ====== ================================ =================================== ================== 6 32 99.0 34 GTCACCACCTTTGCGGTGGTGTGGATTGAAAT # Left flank : GGATGAATACCCACCTTTTTTCTGGAAATAGGAGGAAGCTATGTTGGTATTGATCACATATGATGTAAACACGGAAACAGCCGCCGGTAAATCCCGGTTAAGAAAAGTGGCGAAGCAATGTGTGAATTATGGAACCAGAGTACAGAATTCCGTGTTTGAATGTGTTTTGGATCCCGGGCAATGTTTAATGCTGAAAGCTTCATTAACAGAGATGATTGATGAAAAGGTGGACAGTCTCAGATTTTATTATTTGGGAAATCAAAAAAAAGCACGTGTGGAGCATGTAGGAGTGAACAAAGGGATTAATGTGGAAAAGCCTTTGATATTTTAGTGCGAATCCTAAGTGCACATGAAATCCCCGGGGGATTCGCACCAGAAAATGTCAATATGACGTCTGAATATATATGAATTCCAAGATTTGTGGGGTGCTGAAAGTTAAATATTAGTATAGTTGTGTAGAGAGAAAGGAAGAAAGTATGTAGTAATTATGCAAAATTGCT # Right flank : TCCCTTTAAATCTTGTTTCGTATATCCTCGTCTTTGTCACCGCCTTTACAGCAGCACAATAAGAAATGACAGGCCGCCTTCCGATACACGGTTATCCTTTTCGGCCACCACTAAAGCAGCACGAATAGATTACCCATGATATATATAAACAAAAACTGTTATCTGTTCAGCCAATATTACCCCATAATAGCACAAAAAAACTACTAACCACAGTTAATAGTTTTTTTATAATAAATCTTTTTCTCAGTTTATCTCAAGCTCGCTACGAATTAATTGGAGGAATTCCTCCCTTGCGTATTTTTCCTTCCATGTATCATGACCGTAATTTTCCAAAATGATAAGCCGTAAATTCGGAAGTTTTCCCTCCAGAGGTACACTCAATCCCCGAATCGGAGGAGGATCGTATTTTCCATGAAAGGCAGTTAACGGACAGGTAACATGCAGTATCCGGTCGAGGAGTTCCCGCTTTCGCGTAAAGAAAATATTGCAGCCATTAATGC # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACCACCTTTGCGGTGGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [10,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCACCACCTTGCGGGTGGTGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-4.90,-4.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 31342-30381 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUES01000054.1 Eisenbergiella sp. OF01-20 OF01-20.Scaf54, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 31341 32 100.0 33 ................................ TCAAGTTAATTGACAACGCGGAGACCCTCGAAG 31276 32 100.0 35 ................................ TATTCCAGTCCGATAGAGTTCTCCAGGAATGGAGC 31209 32 100.0 34 ................................ TCTGTGTGCTTTGTAATATACGCCTCACGCTTCC 31143 32 100.0 34 ................................ ATCTCAGGGCACTTTTTTTTAGCGTTACTTAGCC 31077 32 100.0 33 ................................ CTCTTCCATTTTCCCGGCGCATCCTCCCGGCAA 31012 32 100.0 36 ................................ AGTTCTATGAATTCCCCACAATGCGGGCATGGAACC 30944 32 100.0 33 ................................ CCCACCGCCAGAAGGAAGAGATGCCAGGAAAAT 30879 32 100.0 34 ................................ ATCCAGTGACGCTTTATCCCGCATTTTGGTAAGC 30813 32 100.0 35 ................................ GATGTAGGCTCGTGCTATCTCAATACCAGAAAACC 30746 32 100.0 36 ................................ CTTATCCGTGCAAATACCGTAATAATCATCTGTACG 30678 32 100.0 35 ................................ ATTACAAACCTTTAACAATATGTTAAATGGTAGAA 30611 32 100.0 35 ................................ CATCCTGTATGAGCCCATCAAAAATGCTTGACATC 30544 32 100.0 33 ................................ GACAAGTTCAAATCTCCCTATCTCCAGCCCCAA 30479 32 96.9 35 .............T.................. AACACAAGCGAGAACCGGGGGCGGGAGGTTTCCCA 30412 32 81.2 0 ............G......TCC.....AC... | ========== ====== ====== ====== ================================ ==================================== ================== 15 32 98.5 34 GTCGAGGCTTTCACGGCCTCGTGGATTGAAAT # Left flank : GCTTTCTTGTTACTCAGTAGGGATAAAATTGGCATTGCAGCAAGCGGCTTGCAGAACATATTTTCAAAAGGGCGCAATACAACATTTTAAAATGTGTTTTGATCTCTTATAAACGGAATTTTTAAGCGAACCTATTATGATTATTTCACCTGCAATATATTCTAACATATTTCGTTATAGTGTTCGTTATAGTATGATAAAATATAGACTAAAGAAGCAAATAATATTGAATATTGTGGTATAATAAGAATAAATTAGTTTATGAGTAAATAATCGAGCAAAGATAGGAAAGTATGGTAATTTTAGTCTCAAGTGGATAGATGATTTTATGGTGCGAATGTGAAGTGCACATAAAAACATAGGGGGATTCGCACCGTGAAAATACTGAATAGTGGGCGGATATAATTGTTTTAGAAACTTATTTTTATATATAGTTAATGGATTTGTACAAAAAGTATAGTATTATACTTTTTGCGGTTTGATTTTTAGTGATATTTGTA # Right flank : CTAAATCCAGAGCAATCTCCGGCCTCTGTTTAGCCATTACTCGATTGCCATGGATATTAGTACCCTCATTTAATTAGAGCTAAGTTCCCTAAATTTCAGAAGTCCATATCCCGGGAGTAAACCCATTTCTTATTTTTCTTGAAGTAACAGTATATAAGTGGCACAGTGTACGTAATGCCTGTAATTGTTTTTTGGTATAATTTTTAATTGTTCATAATAGACAAAATCATAGTAACGTGATAAAATAAAACATGTAAAAATAAACAAAAGAGTAACGCTGAATTACAGGAGGGACTATGTTCTTAGCACATATTAGTGAAGACGGCCTGCGGGAACAAAGTATTCTGGAACACCTGAAAGGAACCGCAGATTTAGCATGCAGATTTGCATCTGCATTCGATTCAGGGGACTGGGGATATGGCTGTGGCCTGCTGCATGATATCGGAAAATATTCAGACGGTTTTCAAAAGCGTCTTCATGGAGGTAAGATAACCGACCAC # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:0, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAGGCTTTCACGGCCTCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.10,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : NA // Array 4 33634-33397 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUES01000054.1 Eisenbergiella sp. OF01-20 OF01-20.Scaf54, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 33633 32 100.0 37 ................................ TCCCGATGGTGGACTTGGTGGCTGTGGCCGTCAGGCC 33564 32 100.0 35 ................................ TTCCGTATCGCTGACAAATCTGTGGGTGCTGTCTT 33497 32 93.8 37 .............C............A..... ACCTGCATTTTTTAGCAATTGGAATACACGGTATACC 33428 32 71.9 0 .....AA.......AT.CT.TA....A..... | ========== ====== ====== ====== ================================ ===================================== ================== 4 32 91.4 37 GTCGAGGCCTTTGTGGGTCTCGTGGATTGAAA # Left flank : GGTGGATATTAAAAATGATCTGTAGTTAATTTGGTAGAGGGTCTAGGAAAGAAAGATAAGAAGGGAGAGGAGGGAATGGGAAAGCGGCGGGGAATGGGCTGGCAAATGTTATTGCGTTAATAAAAATTCTACAATACAACCTTTAATTTTATGCAAGGGAGACATTATGGTATTGATATTAAGGAGCATAGGCTTTCCATCTAAATTAAGCAGGAGAGAGCAGCGGAAGAAAACGTGACTGAAATGAATAATTGGATTATAGAGAAGGAAAAAGAAGGAAGCTGGTATAAAAATATAATTGATTATATAATCAGGTGGGAAAATCGTTGGTGCGAATGGGTAGCGTACATGAAATTACGGGAGGACTCGCACCAATATAAGGGGAGAAATGTTATAATATGGTTTGTTGCTGCATGACATATGGATAGAAAGATGATATAATATGTGAAAAGTAGATAGTTTGTTTAGGGTTACGAGAAGATTTGTTGCATATTTTTGCT # Right flank : AAATTTAGTTAATCAAAAGTTGAAGAAAATCTTCATTATTAAATGTATTTATTCTTGTTTTTAGAAGTTATAAACTATGATTAGTCCTTAAAATAACTGTTAAGTAGTATAATAAGCATTAAAAAATGGTAAATTAGATAATTATTTAAAATAAATATTTTTGAATTTTGTATGTATTTAATTTTGAGTCATAAAAAATTGTGAAACTTTGAAAGAACATATAAATACTGACTTACATGGTCTATCTAGTTCCAAATTATTTAGTTAAAAATTCGGTTTGACACTTTTTAACACCCCTGCTCAATGAATGCTTTCAAAAAATTTAAGATAAAGTGTAAGTTATGATTTAACGGAATACGTGTTGACTATATCTGCTTTATGAATCTGGTTTATTCGCTTCCCAACATTCTTTTCCTGATTGTTATTAGAAAATTGAATAGTAAGCATAGGATAAAATAAAGGTGAAATTAATGTTAAGTTTGTTGAGGAAATCTATAGAA # Questionable array : NO Score: 5.43 # Score Detail : 1:0, 2:0, 3:3, 4:0.57, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAGGCCTTTGTGGGTCTCGTGGATTGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [10,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,5.28 Confidence: HIGH] # Array family : NA //