Array 1 10577-9551 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_ANMM01000006.1 Lacticaseibacillus paracasei subsp. paracasei Lpp225 contig00006, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
     10576	    36	 100.0	    30	....................................	TCAATGCGGCCTTGGGAAGCAGAGTGAACG	
     10510	    36	 100.0	    30	....................................	GTTGAAGACTTTGACCGAGGCTTCTTTGCT	
     10444	    36	 100.0	    30	....................................	GCGATGATGAAATGTTCAAAGCTCAGCTGG	
     10378	    36	 100.0	    30	....................................	ACTGGAAGATTTAACGTAGGGCAGTTGATT	
     10312	    36	 100.0	    30	....................................	ACTAGATAATGCCTAGATGTTGCTACTGCG	
     10246	    36	 100.0	    30	....................................	AAGATAATCAAGAAGGAAAGAATTATCGCC	
     10180	    36	 100.0	    30	....................................	TGACGATCAATTGCAAGAGCCTCCGCATCT	
     10114	    36	 100.0	    30	....................................	CGGGATCTCAACAACGCAGATCAACCAAGG	
     10048	    36	 100.0	    30	....................................	GCGGCTTCTGGACACTAGACACGCTGATGA	
      9982	    36	 100.0	    30	....................................	TACCAGCAGCGACATCGTGATCGATCAAGC	
      9916	    36	 100.0	    30	....................................	GCAGCCAAACCACCGCGATCAAGCTTGCGG	
      9850	    36	 100.0	    30	....................................	AGCAAAGGTCGGAGGCTGCGCGGGGTTCGC	
      9784	    36	 100.0	    30	....................................	TCCCGGCTTCCAAGACGAAGAACCTGACGT	
      9718	    36	 100.0	    30	....................................	AAGCATTTGACTTCCCAGCAGCCAAGTAAC	
      9652	    36	 100.0	    30	....................................	GCCGTGCTTGCGTATAGAAGCCGTTGAAGT	
      9586	    36	  88.9	     0	..........................T..A..TG..	|                             	
==========	======	======	======	====================================	==============================	==================
        16	    36	  99.3	    30	GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	                              	       

# Left flank :   AGCTTGATCTAGATAAACTTTTTCAACGTCTAATCTATAAGAGGATGGAGTTGCTGATTGAGAATCAGCGGCTTGTCGAACTGATCGATCAATCGCAACAAATGGCAATGGATTTACTCCAAGATCCATTCTTGAGCGACTTGCGAGTCACGGTTGAACCAGGCGGTAAGCTCGAACAAATCATGAAATACTGCAACGTTCATTTCGATGAGGCTGTCACGACAGAGTCAACCTCGAAGATTGAGGCGCTTATTCAAACGTTAACTAAACTAGGGGAAAAGAAACTTGTCATTCTTACAAATGTCAGTCATTATTTAAGTGCTAGAGATTTCTTTGCGGTGACTGAACAGATCGGTGATACAGAACTTCAGGTTGTTCTCATTGAGTTCTCAAAAGTGAACCGAAGGAAATACTTTGAGAAATGCCAGTATATCTATATTGACGAGGACTTCGTTGATAGTCGCGAACTAGATTGATTAGGAGATTGTGTGAAAACACCA
# Right flank :  GCATAATTCCGAGAAAATGAATTGGCGGATTTTAGAGTCAATCTCATGCTAGAAATAACCAATTCCGCAACTTTAACGTCTTCGGTCTGGTTAGCGTTCGCAATATTGATGGCTCTAGCAACGCAGGTAATTGCCGGTGCGGTTTTCGTGGACCGCTAACATCTTTATTATGCCGTCAGCCATGCTTCAAAGTTAGGGATGTCTTTAACGTACCTGCTGGTGTTGACTATGACATCTGCTACTCAATTAATATTGCCGATTTGCTGGCTACACAACTGCCTCTGTAGTGGGAATATAGGCAGTGACGCCTGTAACAATATGATTTAACATTCAAGTTTCTTCAAGGGAAAACATATGCGAGTGCTCATGTTCTTCAAAATGTTTGATGACTGCGAACATCATCGATTATTGTGAAACAGCAGGCATACCTGTCTAAACTTTTTTCGATCAGTGCTTAATTAACGAAGTTCTTCTGTGTCAGTCGCAACCTGAGTTGAGAG

# Questionable array : NO	 Score: 6.22
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:55.56%AT]
# 	Reference repeat match prediction:         R [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 95% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [0.00,-2.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [4-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [63.3-56.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.28   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
//