Array 1 29669-29446 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACBCN010000010.1 Clostridium botulinum strain CJ5-1 10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =================================== ================== 29668 30 100.0 35 .............................. TTTTGTTAGTTATTATGTCGTGTATTTTTTCTAAA 29603 30 100.0 34 .............................. TCCATAAAGTTTTCTCCTTTAAAAATGTTATTGT 29539 30 100.0 34 .............................. ATTATGATGGTGAGATAGTTTATGATAGCGATAA 29475 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== =================================== ================== 4 30 100.0 35 GTTGAACATTAACATGAGATGTATTTAAAT # Left flank : GATAACTAGTTTGGAAATAAAAAGATTATGTTTTAAAATTAATTTAACAATATAAATTACAACAAAACTTTTTATGGTTAATTCTAGCATATCCAATACCACCCCCTATTTATAAGTGAAAGACTCACCAATATCCTAGGAGGATAAAATATTCAAAACCCTCGTAGCCATCCACTACGGAATTACTATCCTAACTTGGATATTATATCATAATTATCTATACTAAAAACAGAGGGATTAAATGGTAAATCACATTTCCATTTAGAATATTACGTTTATTTTAGGATAAAAATAACAAATAATTATATAGAATACGCTAATATTTTTCCAGCCAATTTTAACTTATAAGCCTATCTTAGCTTTTGAAATGTAAGGCTTAAGGTAGGTTTCCCTTATATATTTATAAAATATCATAATCGGTTGGAAAATTTTCTTTAAAACCTTGTAAAATCAATGGCTATATGCTATTCTTAAAAATAAGTAATGGCTATTTTACTATG # Right flank : GTATTTAATACATTTTCTAAAGTATTAGCCATATGTTGAATAATAAGAATCATTAAAAGTCTTAGAAAAATCTAAGGCTTTTATTTTATGCAAAGATTTAGAATAGAATATGATAGGTAAGTAACTTATCATTAATAAAGATAATAATATTTTTAAAATAAAAGTAGAATAATCGGTTATATTAACTAAAGGCTATATGGTATAATATAGATAAATTTGTATAAAGAGGTGCATAAATGGAATTTTGTGAACTGATTGCAACAGTGATGTTAAAAAAAGATATATATTTTGAAGATTGTGGATATATAATAGGGAAAAACATAAATAAAAGTATGCTTTTGGATAAAGATTTAAAGGAAATACATCCAAAGAAACAGTACAAAAATTACGTATTTAATAGTTTTTATCCTATAGAAAGAGACAAATTTTATAAAAAGGATAGATTATATATTTTTAATATTAGGGGATTGAGTAAAGAATTTATAGATAAAATAGAAACT # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [80.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 2 30930-30573 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACBCN010000010.1 Clostridium botulinum strain CJ5-1 10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 30929 30 100.0 36 .............................. TAAGAGGTGATAACGGCGAGGGTGGGGAACTCTATT 30863 30 100.0 36 .............................. TACACTCTAGCCGTTAGGTCATCACCTGTTAAATCT 30797 30 100.0 36 .............................. GTTAACTTCTGAGTATTATTATCTTGCAATGTATCT 30731 30 100.0 35 .............................. TTGTTTATTAGATGTATGTATTATGTGATATACTA 30666 30 96.7 34 .............................T CTAATATATGGATTACAATAACAACAGTGTTTAC 30602 30 80.0 0 AT.............T.A.......G...A | ========== ====== ====== ====== ============================== ==================================== ================== 6 30 96.1 36 GCTGAACATTAACATGAGATGTATTTAAAC # Left flank : GGAATGGCTATTTTACTATGGTTGAACATTAACATGAGATGTATTTAAATAGATTAAATGTCTCTTCTGATTGTAAGGCATGTATAGTTGAACATTAACATGAGATGTATTTAAATGCAACTACAATAGCAAGTGTAGCTACAGGTATGGCGATTGAACAGTAACATAGGATGTATTTAAATTTGTATTGTTTACATACTTTATTTAATATTGCTTTAGTTGAACAATAACATGAGATGTATTTAAGCAGAGAACGCAAATCTGTGATTTGGAGTGAGTCGTTTACTCTTTAGAGAATAAGAGAAGGAGTTTTATAAATTGAATCTTTCCAGGCGTAACAAATTTTAAAACCTATTCTAATCATTGATATATAAGGCTTAGGATAGGTGTTATTTTATATTTATTAAAAAACGTAATCACTTGGAAAACTTTCTATAAAACCTTGTAAAATCAATGGTTGTATGATATTCTTAAAAATAAGGAATGGCTATTTTACTATG # Right flank : AAACAAATAACGATGAAAGGATAACAAATAATAATTAAGGTAGCTTTTCATTGACAAGGTTTTTCAACATTTTGAAATTGAAAAATCAATAGCAAATATTATACAGAGAGGGAATCAATTGTAAGCAGTAAAGTCTAATTTTATAGTTAGTTTTTTATAGAATTAGATAGTTAAAAAATTAAACATATAAATATGTGTTTATTTTTTATATAAATTTGATATAATATAAATAAGAAAAGCTTAGTGTTGGAGCACTAAGCAATCCTTAGAATATTTATTTTGTTTTAGGGCTATTGGATGAATTTAATAATTAAATTTGAGAGATTGAAGCACTATTCTTGGTCGGATGGGTGCTTTTTCTCTTTGCCATTAAGTTCTATGTGAATACCAAGAAATTTAATCTTGATAACTAGTTTGGAAATAAAAAGATTATGTTTTAAAATTAATTTAACAATATAAATTACAACAAAACTTTTTATGGTTAATTCTAGCATATCCAA # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGAACATTAACATGAGATGTATTTAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //