Array 1 119299-118111 **** Predicted by CRISPRDetect 2.4 *** >NZ_BFHM01000023.1 Escherichia coli strain ECSC017 sequence023, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 119298 29 100.0 32 ............................. ATTAACGGTCGCATCATCATATTGAAAAAATC 119237 29 100.0 32 ............................. TTATATAATGGCGCATTATTTTGGCGTATCTG 119176 29 100.0 32 ............................. CACATTTCGCAAGACGCATACGGAATCGCGGC 119115 29 100.0 32 ............................. GTGTACCTGCGCAAAAAATAAGCGGCGGCAAA 119054 29 100.0 32 ............................. CCGAAAATACACCTAAATCAGCAGTTATCGCT 118993 29 100.0 32 ............................. GCGAAAGCCCAGCGGAGATTCATCACGTCCGC 118932 29 100.0 32 ............................. CGTTTATTGCGGCTATTGAAGAAGAGCAGGAA 118871 29 100.0 32 ............................. AAGTATTTCCGTGCACCGTGGGAGGCGTTTTG 118810 29 100.0 32 ............................. CGCGGGATACGCCGGTTATATCACTGGTAGTG 118749 29 100.0 32 ............................. TAGTTGTGCTGATTTTTGATGGATGGTTATAA 118688 29 100.0 32 ............................. GAACTTGCTTACCTTTGCTGTGCTCGTCAGAA 118627 29 100.0 32 ............................. GGCGTTGGTGGCTGGGGCCGCCCGGTTGTTGA 118566 29 100.0 32 ............................. AAATGGCATTCGCTGTTGGAATTATGGGGTAT 118505 29 100.0 32 ............................. AGCGATTTCAACGCGGCGACGGTGGACTTAAT 118444 29 100.0 32 ............................. CCAGTAGGCGATTTGCGGGGCGTTCATGTTTT 118383 29 100.0 32 ............................. AGTCAAAATTAGCAAAACTTGATTCAAATAAC 118322 29 100.0 32 ............................. TCCGGCGAGCTGGTCACCTGGCTGAATAAATT 118261 29 100.0 32 ............................. GAAACTGAAATCGCGGTTGATAACGCTGATAT 118200 29 100.0 32 ............................. GGTAAAAACACGGTCTGAACCGACATTCATGT 118139 29 96.6 0 ............T................ | ========== ====== ====== ====== ============================= ================================ ================== 20 29 99.8 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTTGCCGCAGGTGAAATTGAACCACCACAACCTGCGCCGGATATGTTACCGCCTGCCATCCCTGAACCTGAAACGCTGGGTGATAGCGGTCACCGGGGGCACGGCGGATGAGTATGGTCGTCGTTGTTACAGAAAATGTCCCTCCGCGCTTACGTGGACGGCTCGCAATCTGGCTACTTGAAGTGCGTGCCGGTGTTTATGTCGGAGATACATCCAAACGTATTCGGGAGATGATCTGGCAGCAAATCTCTCAACTGGCAGGTTGCGGAAATGTGGTAATGGCCTGGGCGACCAATACCGAGTCGGGTTTTGAATTTCAGACCTGGGGTGAAAATAGACGTATTCCGGTGGATTTGGATGGGTTGCGTTTGGTTTCTTTTCTTCCTGTTGATAATCAATAAGTTATCCGTTCTTTAAAAATAAGGAAATGTTTTAATTTAGTTGGTAGATTGTTGATGCGGAATAAATTTGTTTAAAAACAGTTATGTATGCTTAGT # Right flank : GACGCACTGGATGCGATGATGGATATCACTTGGAGTTCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCATACCCATCAAGACGCCTTCGCCAGCTCCTTCACCAGCGGTAGCATTATCCGCATAACATCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGCTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCGGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTGCCAAGATTCCAGTTAGTCGCTTCCACCGAAAGTACAGCAATACCGGCTTTGTCGAATATTTCTGCGTCATTACAACACCCGGTGCCTTTCGGATAGTTTTTATTCAAACCTGGATTTGTGGTGGCGGCAATTCCATGGCTGCGGGCAATTGCCAGCGCCCGGTCGCGCGTTAATTTCCTTACTGCTTCAGGTGTTTTTACGCCACTGTTGAAATACAGCTTATCGCCAACAA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //