Array 1 20798-21854 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE386984.1 Desulfatibacillum aliphaticivorans DSM 15576 G491DRAFT_scaffold00031.31, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ====================================== ================== 20798 28 100.0 36 ............................ TTCAGCGCCCTGTTGCGGGTAGCCCATGAGGTTCTG 20862 28 100.0 36 ............................ AACCCGATGAGCGAACTCGGGCTTGTTGAAGTAGAC 20926 28 100.0 37 ............................ CCTGTCCAGGGCTGTTGTCCAGGGTAAAAATGCCCGT 20991 28 100.0 38 ............................ TTGTGAACAACTCGGAGCACGAGGTTTCCCTGTTTTGG 21057 28 100.0 36 ............................ TTTTGCTCTGGGGTAGACTGCTTCCAGATAGGCTTA 21121 28 100.0 36 ............................ ATTTTCCCGGCGTCACGAAAATGATTTAGCGGATGG 21185 28 100.0 36 ............................ TTTTGCTCTGGGGTAGACTGCTTCCAGATAGGCTTA 21249 28 100.0 36 ............................ ATTTTCCCGGCGTCACGAAAATGATTTAGCGGATGG 21313 28 100.0 37 ............................ TTGTCCTCCGGCAACCTGACCGTGGGCAAAGTGTACG 21378 28 100.0 37 ............................ CTGGGCCAGGACACGCAGGCGTATCTTAACAGTCAGG 21443 28 100.0 37 ............................ ACGTCAGTGACCACGGTTATCATGCCGATGTAGTCAA 21508 28 100.0 35 ............................ ACGTTTTCGGCGGTCATGTCCAAGGACCGGAACAG 21571 28 100.0 36 ............................ ACTGCGGAGGACTGGCTATCGCCCGTGCTTTCCCAG 21635 28 100.0 36 ............................ AATGGATAATCCAGGCTATCAGGGCCGTTTTGCCGA 21699 28 100.0 36 ............................ CATATAACGCTTTGATCATCACCAAACCGAGCCACA 21763 28 100.0 36 ............................ GCCCGAAACACTGCTTAAAGCGCCCCGTGTTGCGGG 21827 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ====================================== ================== 17 28 100.0 36 GTTATCCATCCCTATAAGGGGTTATGAG # Left flank : ATCCGTCATGGGCCTGACCCCCTACGAAGCCTTTAAACGAAAGCCCTGAAAGGAGGCGCATCATGTTCGTGGTCATGACCTACGACGTGGAAGCCAAACGCACCCACAAATTCCGCAAACTCCTGCGGAAATACCTCTCCCACACCCAATACTCCGTGTTTACCGGCGACCTCCCCGAAGCCGCACTCCTGGAGCTTCGCAACAAAATCCACGAGATCATCCTGCCCGGAGACCGCGTGACCGAAATCACCGCGGAAAACCGCCATAACATCAATATTGTGCACCTGCTCGGTCAAAAACCGAAAAACGGTGCAATAAAAGGCAAAGTCCTGACCACCGAGGACTCCAGCCATAAATCCGACTACCAGGTGCTCTGATCCCCAACTTCAACCCCCGGTCCTGCAAAATCCCCCGGGGTGTGAAGTCGAATTTACTGATTTTCTCAAAAAAGATGTTTGGAAAAATGGACAAAACAAAGCATTTTTGCAATGATTAAAAGG # Right flank : GTTCATCCAGGGGCTTTTAAACGATTCCGACGGCGATGTTATCCATCCCTATAAGGGGTTATGAGACGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATCCATCCCTATAAGGGGTTATGAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.80,-4.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [71.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA // Array 2 22625-23486 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE386984.1 Desulfatibacillum aliphaticivorans DSM 15576 G491DRAFT_scaffold00031.31, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ===================================== ================== 22625 28 100.0 36 ............................ CAGGCCCGAAAGCCCGTCCCGTGGGATGGGTAACAC 22689 28 100.0 36 ............................ ATATTCCTGCCCATGCCAGCCGGTGACAAGATCGGA 22753 28 100.0 36 ............................ AAGTTTAAAAGCAACCTTGGCTCCGTCAAGGAAACA 22817 28 100.0 36 ............................ ACAAGCAATGTCAAATGGTCTGACTTATCAAGTGTG 22881 28 100.0 36 ............................ ATGGGCAAACACTCCAAGGCCGCGTTTATGGCCTAT 22945 28 100.0 36 ............................ CGTTGTAATACTTCGCAACCAGATCCCCGGAGCCAA 23009 28 100.0 37 ............................ CTGGCTCCATGACCCAGGCCGTCGCCCAGGATCTTGG 23074 28 100.0 36 ............................ AGACGATATTTATCAGTATGCTGAGTCTTTCCAGGG 23138 28 100.0 37 ............................ GGTCAACCACATGGGCGCAAAGATAAGCGCCGGTCTG 23203 28 100.0 36 ............................ AGACACGGACATGGGGAAGCTCGGGAAGGATTTCAT 23267 28 100.0 36 ............................ ACTTTGGCGAGCAAATCCAGTGCCCAGGCTCGGCAG 23331 28 100.0 36 ............................ TGGAAGAAGCCAAAAAGCTGGCCGACAAAATCGACC 23395 28 100.0 36 ............................ TTCCGTCCTATCCCCTGCTATACGGCCATAAACGGT 23459 28 96.4 0 ...........................T | ========== ====== ====== ====== ============================ ===================================== ================== 14 28 99.7 36 GTTATCCATCCCTATAAGGGGTTATGAG # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCGTTCAAG # Right flank : TTTGAACAGTCCCAGTCCAGAGAGAGGTTGATCGAGATCTTCAGAAGCGCCGGCCGGGGAGGGACAACCTACAAAGGCACAACGCATCAGCAGGCGGTTTCTTTTCAGTCCAGGCACATGGTGCTTCTGGCGAGCATCGAAAAAAGCCTGCCCAGAGCTGCGGACAATTCCCGCTTTCTCTCCATTTGCACAAAAAAGGACCCGACCAGAAAACCGAAGATTCCGGATTGGCGCGAATTGGAAGAAATAAGAACGGACATGGTTGCCTACGCGTTATGCAGGTTAACTTGGGCTCAAGTCGACCTCAATAGGGGCACAGCCAAATTGGATCCCGGTACGACCAAGAACAACGAAGGCCGTCTGGTTTTTTTGGATGAGGAGTTGCAAGGCATGTTGAAGGGTCTCCATAAAAAGCGCAAAAGCCTACTACCCTGGGTATTTCTTAACGAACGGGGAACGGGCCGAGTGGATCAGTTTTCCAAGTCATGGGCAAACGCTTG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATCCATCCCTATAAGGGGTTATGAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.80,-4.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [6.7-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 27661-26968 **** Predicted by CRISPRDetect 2.4 *** >NZ_AUCT01000023.1 Desulfatibacillum aliphaticivorans DSM 15576 G491DRAFT_scaffold00020.20_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ========================================= ================== 27660 35 100.0 39 ................................... AATTTTTCGGGAACGTCATTCAGCGCGATTGCTTCTTGA 27586 35 100.0 40 ................................... TCGCGGGCCTGCTTGATGGTTAAGTCGTCGATATTCATTT 27511 35 100.0 38 ................................... TCCAAAAGAGTGTTGCATGTCCATTCCCAGATAATGGG 27438 35 100.0 41 ................................... TTGAAGGTGCTTTTGATAGGTCTGAAGCCACTACAGATTTC 27362 35 100.0 39 ................................... TGCCTGCATAATCCCTTAGCCCTAACGGGCTTGCCGCAC 27288 35 100.0 38 ................................... TTACAGTCCAAAGTATTGGTACATTGCGTCTTGCATGA 27215 35 100.0 34 ................................... CCCTGTGGGATGCAACATAGTACCCATATCTATC 27146 35 100.0 35 ................................... TCTTGATAGACTCTTACTACTCTTTCACTCATGGT 27076 35 100.0 39 ................................... TTGATTTTGTTGATTTTGCAACGAAACGTTGCTATCAAG 27002 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ========================================= ================== 10 35 100.0 38 GTAGGAATTGACCTGACTTACGAAGGGATTGCGAC # Left flank : CGACATTACCGATCCCAAAAGGCTGGCCAAGGTGGCTAAAACCATGGAGGACTACGGAACCAGGGTCCAAAAATCCATCTTCGAAGTGGAGGCGGACGCAAGAATCTTCTTCCTCATGAAAAAGCGCCTGGAAAGCATTATCGACCCAAAGACGGACGGCATCAAGTATTTTCCCCTGTGCGAAAAATGCGCCGGAACCCTGGAAGTCATCGGGCAGGGCCACTTTCTGGACCCGGACCATGAATTCCTGATTCTGTGACTTTTCCGCAGACCTCCGGGCGAAAAGAGGCGATTTTTATAACCTACTGAAATAACGACATTTACCGAAATCGACCATCAGGATGTCTGCGGAAATGGGAAATCATACATGTTTTCAAATAGTTAAGCTCTATACCCACAACAGAAAAGGAGGCGTTTTATGGAATACATGAGTTTTTTCCCGGAGGTCTGCGGAAATGGGGTTGCAATAGGCTGGTTTTTAAGCCTATTCTAAGGGTGCA # Right flank : CAAGATTTCAGAATCTTTATAGGGTATAAAAAGAACTGCTTTTGGAACCATGAAAAAATAGTTGACAATGTGTTATAGCATTCTGTATTATCAGTTATCATTGGTAACAGAAAGGAGCGGTCAATGCTTGAACTTACAAAACGGGAAATCGCCGAAAAACTTAATCTGCCCATTAGAACTATTCAACTCTGGACAGACCAGGGAATAGTTTTTCCAGATGTGAGGGCTGCCTCAGGGAAAGGTATCGCCAGGCTCTATTCCGAGCGCAATCTATTGGAGTTTGCTATGGTTAAAATTTTGGCGAAGGACTACAATATTAAATTAACCCAATTGCAGTCCATGTTTCTTCTTCTTCGTCAAGACGACTTGGGAGAAACGCCAAGTGGATTCAAAGATTTTTACACAGATCCCTCTTATGGAAATTCCAAAGAGATGTTATATGTCATGAGCATCAACGCATCGTCAATGGGAGGCGGCAATCAATTGATTGTCATGACTAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAGGAATTGACCTGACTTACGAAGGGATTGCGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.43%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.10,-2.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [71.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA // Array 2 32017-30674 **** Predicted by CRISPRDetect 2.4 *** >NZ_AUCT01000023.1 Desulfatibacillum aliphaticivorans DSM 15576 G491DRAFT_scaffold00020.20_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ========================================= ================== 32016 35 100.0 37 ................................... TCACTCCCGCCGCAAAATTCGATATACCCGTATCCAT 31944 35 100.0 37 ................................... TCTATGCCGTTTTCCAAATCCTTGATCCGCTCTTCGT 31872 35 100.0 40 ................................... CTCCACAGCTTCCCAGAGTTTCCCATAACCGCGTTCACGG 31797 35 100.0 39 ................................... ACCTCACGCCGGGCTTGCATTGCGCCATATAAACCCAAA 31723 35 100.0 36 ................................... CTGAATATCTTGTCCATGTCTCCTACTCCCTTTCGT 31652 35 100.0 39 ................................... ACTTGACCAGGCTCCCAATTATCAAAATTCTTGCGGCCA 31578 35 100.0 38 ................................... AGGCAATTTATTTTCCATTAAAGCTTTGATCAATTCAC 31505 35 100.0 37 ................................... GTTAGGGCTTTTCTCATATTCAACTTGGGCATGTAAG 31433 35 100.0 41 ................................... TCGCTGTCCCCGGTCGCTTTGATGGAGCACTGTTTCGTCAA 31357 35 100.0 37 ................................... TTTGATAGTCATTAATTAGATTATCCATCTCTAATTC 31285 35 100.0 35 ................................... TATTTCGGGCCGTAGCCCTCGGCTGCCCAGTCGAT 31215 35 100.0 37 ................................... CCGATACATGTCGTAAGTCTCCGGGGAGATCCCTACA 31143 35 100.0 38 ................................... GCCGCAATGGCTGCAAAAGCCGCCGATATAGACACTAT 31070 35 100.0 38 ................................... TGCCCGGTATGTTTTATGTTCACGCTTGCGCCTTTCGT 30997 35 100.0 38 ................................... CGCCGTTAAACGCGAGGAAAGTCCCAGTTGCATACAGG 30924 35 100.0 36 ................................... GGGACCACACAGGGGACACATTATTCATCCCTGTCC 30853 35 100.0 37 ................................... AAGCCCTATGGTTGCAACATTTTCTTCGTCATCCACG 30781 35 97.1 38 ....................T.............. GTCCATCTTCAGCTTATCCATCAAGCTGAGCTGCGGTT 30708 35 82.9 0 .............................GAATCA | ========== ====== ====== ====== =================================== ========================================= ================== 19 35 98.9 38 GTAGGAATTGACCTGACTTACGAAGGGATTGCGAC # Left flank : AAAGTGCCTGGCGTTTTTTGACGGTTCAGAAGGCCTTGCAGATAAAATTCTGGAATTGGCGGGCCTGCGCAATGACATCAACCACGCGGGTTTCACCCAATCGGCCATGCCGCCAAGATCCGTGGAAAGCAAATTGAAAAACATCCTGGAAGACGTGGAGTCGGCCCTGGGCCTGTCATGATGCCTTACATGGATTCATGTGTTCGGGGAATGATTTGGAAAAACTGATATACAGCGGCAACTTGCCGGCGGGATGGGCGGCTTCCGCAGACCTCCGGGGAAAAAGCGGCGATTTTTATAACATGCTGAAATAACTATATTTACCGAAATCGCCATTCAGGAGGTCTGCGGAAATGCGAAATCATACATGTTTTCAAATAGTTAAGCTCTATACCCACAACAAAAAAGGAGGCGTTTTATGGAATACATGAGTTTTTTCCCGGAGGTCTGCGGAAATGGGGTTGCAATAGGCTGGTTTTTAAGCCTATTCTAAGGGTGCG # Right flank : AGGCTCTTTTTGGCGTTAAAAAAGAGCCTTTTTTTTCACCGTTTCCAATCCGCCCCGGAAACGTTTCCGCCCCATGCAGCCCTTCTCCCCTGGGGCCGCACATAACCCGCTATTTATAAAGCATTTAATTTAAGCCTGGTTATTAAAAATGGAAACGTTGCAAAGCGTGTAATGCATTATTTCCCGGGGTATAGTGCGTTCCGGTTTCGCCGAGAAGAACAAGGCGAGCATGAGCTGCCACCCTGTCCGTGCAGGCCTCCCTCAAAAAACAAATCAGGAGGCTGAGGGCCGGCGGTCGGAAAGGAGGCGCCCCAAACATGTTTTATGAATACAAACCCTTTTTGTCCGAAACCGGACGCATAAGGAGGCGGCCTATGGAAAACAGTCTTGAAAAACTCACGACCATGCTGCCCGTTATTTTGACGAGGATTGTGGATGCCAATATCGAACCCGTGCAAGAGCACATTGAGATGCTCCGGGTGAAAAATCCCGGCTTGAAC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAGGAATTGACCTGACTTACGAAGGGATTGCGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.43%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.10,-2.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 1 85378-84557 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE386982.1 Desulfatibacillum aliphaticivorans DSM 15576 G491DRAFT_scaffold00004.4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 85377 28 100.0 33 ............................ TCGGCTTGAGCAATGGAGTTGATCTGGACGAAG 85316 28 100.0 33 ............................ TGTGTCGCCCAGGGTTAAAGCGCGGGCTGCGTC 85255 28 100.0 33 ............................ TTGTGTTGGTGAACCTGCATCAGCAAGTACAGG 85194 28 100.0 33 ............................ CAAGCGCAGGCGATTTTCCGTGCTGGTCTGTCA 85133 28 100.0 33 ............................ CGTGGTCCGCCACGCCTTCCGGGACATTGTACT 85072 28 100.0 33 ............................ TGGAGTTCCCAGCGTCCGTGACAACATCAGACG 85011 28 100.0 33 ............................ CGTTGTCCATTTCTCCGAGACCGGAACCCCATA 84950 28 100.0 33 ............................ CGGCTGAAAGTATGAACGCGATGATAGGCGTCA 84889 28 100.0 33 ............................ TTGTACTCGGCGCTTACTTCCTTTTTAAATACC 84828 28 100.0 33 ............................ TCCCAGGCCGTGTGCACGAGCATTGCCGGGTCG 84767 28 100.0 33 ............................ CATGGTTTTCCAGCGGCTTGCCCTCTGGTATCG 84706 28 100.0 33 ............................ CTATCGTTGGTTTTGCCCGTGACCTTATCAGCC 84645 28 100.0 33 ............................ TTTGTCCTTGCTGGTCGGTTTCAATATATCGTA 84584 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 14 28 100.0 33 GTCTTCCCCACGCCCGTGGGGGTGTTTC # Left flank : AAAAGGACCTCTGCATTGACCTGGCTTTTGCGTTGACCCTGGAAATGGGAGGAAGATATAATAAACACACCGTGTCCGAAGCCTTCCGCTCCAGAGTCGTCGCCATAGACCTCCTGGACCGCATCGCCAAGGACATCCAACACGTCCTGTATGGAGATTAAAATGCTTGTCGCCGTCGCAAACCACCTGCCTCCGGCCGTCCGGGGCCGCATGAAACTCTGGTTCGTGGAGCCAAGGCCAAACGTTTTCGTCTCCGGCGTTAAAGACTCCGTGGCGGACGGAGTCGTGGAATACCTGCTGGACCACTGCCCGCCGGAATCCGGGCTCATCCTGTTCCAGCGTTCCAATAAACCGCCGGGCTACAAAATCCGCGGGCTGGGCGATCATACCAGAGCCCTGGTGGAAATCAGCGGCCTGCAATTGGTGCAGGAGAAAAATGGCCTCTTGGCAAAATAGCAAGATGTTGTTATTGGGATAACAAACGCCGACAAGATGTTGGT # Right flank : CATATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGCCCGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTTCCCCACGCCCGTGGGGGTGTTTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.80,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [6.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //