Array 1 10365-15093 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABAGR010000015.1 Parafannyhessea umbonata strain 105184 Contig_15, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 10365 33 100.0 35 ................................. ACTTCCGTATGCTGAGGGAGCACGCCCCGTTCGAG 10433 33 100.0 37 ................................. ATAGGGTCGCGACCACCTTACGGGTACGACAAAAAGA 10503 33 100.0 33 ................................. ACCCATGTCGTATATGACATGGTGATTGACGAA 10569 33 100.0 34 ................................. ATCACGGTTGACGTTGAGGACATGAACGCCTATT 10636 33 100.0 33 ................................. AAGCGGTGCAGGTCGATGACGGCGGTCGGAGCG 10702 33 100.0 33 ................................. AGAGAACGCTCAGCGGGCTTGCTAGTACGCTGC 10768 33 100.0 36 ................................. ACAGACGAATGGTACGGCGACGAGGCTATGAAGGAA 10837 33 100.0 33 ................................. CGCGACCGCCTGAAGGTGCTGCACATCGCCAAC 10903 33 100.0 33 ................................. ACGATCTCTGCCGCCCGCTCGTCGCACAGCCCC 10969 33 100.0 35 ................................. CTCTTGTTCGCCTCTCCCCTTCCGTACAGCTCAAC 11037 33 100.0 36 ................................. AATACCGATTTGGTATTGCCTGACAGTTGAAATATA 11106 33 100.0 34 ................................. GTGAACGGCGATGACGCCACCATAAAGAGGATCT 11173 33 100.0 35 ................................. CGCTTCGCAAGTCTGCGGAGCGCCACGTTGGGGAC 11241 33 100.0 33 ................................. CCGTGCGCCGCTCGTCCACGACGTACAGGCTCG 11307 33 100.0 33 ................................. ACAGTCCGTCGGGTAGTCTAGGCCCGTTGTGGA 11373 33 100.0 33 ................................. CACTGCGCCGCGTGGTCGGTGCATAGCACGTAC 11439 33 100.0 35 ................................. TTGCGCCCATCCTCTTCGAGCTTGCTCGCGTCCTC 11507 33 100.0 35 ................................. TTTGCGGAGCCATCCACAGCATTGCCGCCGACGTG 11575 33 100.0 33 ................................. CAGCGCTAGGTCACGCCCGCGCGTGTACAGCTC 11641 33 100.0 36 ................................. AGCACTTGCAGCTTGGACGCGATGCTCTGGTTTCGG 11710 33 100.0 33 ................................. ATACGCAGGCTCGATATGCTTGCGGCCTGGGTA 11776 33 100.0 34 ................................. ATGTCGGAGCTCGCCGCCTGGAAGATGTCGCTGC 11843 33 100.0 34 ................................. TCGTATCCGGAGTCGCCCGGCTCGAACGTCGTGT 11910 33 100.0 33 ................................. AAGCAGGTGTCCTACGCCTTTGGCCGCGCCGAG 11976 33 100.0 34 ................................. ATGGTGACGCCCTCCCCCTCTGAGCCTTGGAGCT 12043 33 100.0 33 ................................. TTATTCGACCAGCCAAGCTGTGCGCCCATCGCC 12109 33 100.0 34 ................................. ACGGGCACCGCCGTGAACGTGGAGGTCTCGGAGT 12176 33 100.0 35 ................................. CGCCATCCGCGCACGTGCGCCACTCGCAACGTTGC 12244 33 100.0 33 ................................. ACCTCCATCGTGCAGGTAAGCGTGGTCCATTCG 12310 33 100.0 35 ................................. ATCCATGCCAGCGGTGGTGGTCACCACTGGACTAT 12378 33 100.0 34 ................................. ACGTTCTGGACGGTGGTGGCGGGCATGACCTTGG 12445 33 100.0 35 ................................. ATGGTGACGCCCTCGCCCTCGCTGCCTTGGAGCTT 12513 33 100.0 33 ................................. AGCGGGTAGCCCGTGGAGGTGTTGACGGATACG 12579 33 100.0 34 ................................. TTGAACAACCTGCCGGACGAGAAGATCGTGTATC 12646 33 100.0 35 ................................. TGGAGTGCGATTGCCGTTGCTGGGCCAAAGTATCC 12714 33 100.0 33 ................................. TCCAATTGACTTGCGCTGACACCGCCTTGAGAA 12780 33 100.0 34 ................................. CATCGTTATCTGCCGTGATCCATCGCGTGGCACG 12847 33 100.0 35 ................................. TATCCGTCTGCCTAGACCATCCTGCGCAGCTCGCG 12915 33 100.0 33 ................................. GTGAGCGCGGTGTCCACGTCGCTTGCGGCCTTG 12981 33 100.0 34 ................................. TTGGGGCACGTGGGGCATTTGCCCCATCGCGTGC 13048 33 100.0 34 ................................. CTCCCCGCGCCTTGCAGACCCACAGGTCGGGAAT 13115 33 100.0 33 ................................. CTCGCGATTGCGTTTGCCGTGTCCATGAAAGAA 13181 33 100.0 35 ................................. AAGTACTGGTCGGGCAACTCGAACAGCAAAGATGG 13249 33 100.0 33 ................................. TCGTGCGCGGCTGGACTTTTTGCAGCGGCGATA 13315 33 100.0 34 ................................. AACCCGCGCCCAGCAGACACGATGGTACCAGAGA 13382 33 100.0 34 ................................. TGCACGTGGTGCTGGATGTGGCCGCGCTAATGGA 13449 33 100.0 34 ................................. AGAGATGTCGCATATGCACTTGGGTTCGTCCGCG 13516 33 100.0 35 ................................. TTGATGGCGCGGCGGGTGGCGGCAGGAACGGTGAC 13584 33 100.0 33 ................................. TTCTTCTCGGTCGCACAAAGAAACATAACACAC 13650 33 100.0 33 ................................. TCGCAGGGTTTTAGCTGGAACAAGGTCGAGCTG 13716 33 100.0 34 ................................. TGAAGCAGGGGATTAAAGACTATGCCGAGCGCAT 13783 33 100.0 35 ................................. TGGCATGGGGAGGATTCTTCTCATGATGAGTAGGC 13851 33 100.0 35 ................................. GTCCGTTGGTGTCCACTCGGACCCTGTTGGTCGGC 13919 33 100.0 33 ................................. GATAAACGTATGCCGAAACCGAACTTTTGCCCT 13985 33 100.0 33 ................................. TCTAATCTAGCTTGAATTACTAGCAAGTCGTGA 14051 33 100.0 33 ................................. ATTGATCCGACGTGCAGTATGGACGCGATAGAC 14117 33 100.0 34 ................................. TGCCCTGAGTGTGGCAAGAGGGTGGTTGACGATG 14184 33 100.0 34 ................................. CTTGCGTCATGCCCACGGTTTCGCGGATTGCGCG 14251 33 100.0 34 ................................. GTCCGTGGGCGTCCACTCGGACCCTGTGGGTCGG 14318 33 100.0 35 ................................. ATGTGTCACCTCGACTCGATAGACGAGGCAGCGGA 14386 33 100.0 34 ................................. ACGTTGACGTATGCAGGCTCAAGGCCGCTGATGT 14453 33 100.0 36 ................................. ATGACCTGCTCAAACACGGTAGTCGGCATGGCCCTG 14522 33 100.0 34 ................................. AGGAAGCTATGGCGACCATCGTGGAAGGGGCATA 14589 33 100.0 33 ................................. TCGGATTGAAAGAACAGGCGGTGCGGAAGCGTC 14655 33 100.0 35 ................................. ACCTACCGCGAGGGCACCATCTACGGCACGCACAC 14723 33 100.0 35 ................................. ACGATTGATGGACGCATGGACTTTGCAAGTCCGGA 14791 33 100.0 35 ................................. ACCCACGAGCGCCCCGACAGCTTTGAGCGCATCGC 14859 33 100.0 35 ................................. TGGATACATGGGCCGCCGAGCCCGTTTCCGGTCAT 14927 33 100.0 33 ................................. AGGTCGACCCCGTGCGACAGGCACCACGTCGCG 14993 33 100.0 35 ................................. CCAGTGTACGCGCCGTTGGCCTTCAGCGCTTCCGT 15061 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ===================================== ================== 71 33 100.0 34 GTCGCCCCTCGTATGAGGGGCGTGGATTGAAAT # Left flank : GGCTATCCACCTTTCCTGTGGAAGTAGGGGGTGCCTTATGTTGGTGGTCATTGCATACGATGTGGATACAACAACCAGTGCTGGACAAAAGCGGCTCCGAAAAGTAGCCAGAATCTGTGTAGCGTATGGACAGCGTGTTCAAAATTCCGTCTTTGAGTGTGATATAGATGCGGCCACTCTGGCCGAACTCAGGAACGAACTGATAAAGGCTATAGATGAAAGTGTGGACAGCTTGAGGTTTTATAACCTGGGCGATAACTACAAGAACCGGATCACTCAAGTGGGCGCCAAGAAAAGTTATGACCCAGAGGGCTTCCTTGCGCTGTAGGCGGCATCCATGAGGTGCGAACCTTGGGCAATCAGGGTTCACACGGCTCCTTCGCACCTTGAAAGCCGTATATTTATATGAGAGAGAAGCTTTTTTGCGGATGTGACGAGGCTTCTTTTGCAGTGCAATACAACATATTGTGCATTGGATTTCAATTGCACAATATGTTGCG # Right flank : TACTTTTATGCTCCTTAGATGTCGTTCACCACGAGGCGCACGGCGTCCGGACGGGCGTAGTGGCCGATGGGGTCGAATTCCCACTTACTTGAGGCTACCATCTGCATGTCGAGCGTCGCGTACAGGATGCCGTCCGTATCCCACAGCGGCTCGGCGCCCGGAACGTAGTGGCCGGCCGGGTCCACCACGCAGCTGCCGCCGCGGTAGACCACCTCTGGCAGTCGGCTGACTTCGTCCGTGGCGCGCAGGTCCGCCGGGTAGTCGTCGCGCACGATGTACGGGGCACAGTTGACCACGTAGCAGCGGCCCTCGATTGCGATGTGCTGCACCGTGGCCTGCCACTCCGGGTTGCCGTTGGTGTTGGGCGCGAGGTAGATGCTGACGCCCTTCTGGTACAGTGCCGCGCGTGCGAGCGGCATGAAGTTCTCCCAGCAGATGAGCGTGCCCATGGGACCCCACGGCGTCTGGCTCACGGGGAAGTAGTGGTCCTGCGCGTCGCC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCTCGTATGAGGGGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.40,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [65.0-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : NA //