Array 1 500492-501801 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP054938.1 Streptomyces harbinensis strain NA02264 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 500492 29 100.0 32 ............................. GAGTTGTCCACGTCCACGCGACGGGTTCCCTG 500553 29 100.0 32 ............................. TCGTCGCCCGGCAGACCCAGATCGACGAGGAG 500614 29 100.0 32 ............................. CGACATGGGATACGCCCACTACGCCGTCACCC 500675 29 100.0 32 ............................. CACGTCGCCCGCCCCCGCAGCCCGGATATCAC 500736 29 100.0 32 ............................. ATCGAGCCCCCGCGTGCGGATTGCTGCGACGT 500797 29 100.0 32 ............................. ACCGGGTTCTCGGCGGCGGCCTCCTTCGCGAC 500858 29 100.0 32 ............................. CACAGTTGGAGCGAGCCAGGGCGGTCCTGCGG 500919 29 100.0 32 ............................. CGTCGGTGGACCCTGGTCCACCGACCCGTCGG 500980 29 100.0 32 ............................. GGCCTCCTCAACGTCGTGCGCGGCATCAAGCA 501041 29 100.0 32 ............................. GTTCGATCTGTGGCCCACGGCGAGGAACGCCG 501102 29 100.0 32 ............................. CATCTGGGACCCGAGCCAGTACGGCGGCCAGG 501163 29 100.0 32 ............................. CGCTGGAGGTCGCCGCGGAGCCTCGGGATTCG 501224 29 100.0 32 ............................. CCGGCCGCGCGCATCGAGGTGTTCCAGATCAG 501285 29 100.0 32 ............................. GGCCGGACGTGGTTGGTGACCTGGGTGTGGTT 501346 29 100.0 32 ............................. CGCAGCATCTCGGTGCCTGTCGGGACTGACCA 501407 29 100.0 32 ............................. TGCTTGCCCCGGCTCAGCCAGCCGCGGACGTT 501468 29 100.0 32 ............................. ATCGCCATCGCCCTGTCGCAGTGGACAGGCCC 501529 29 100.0 31 ............................. TGCTTGAGCATGTGGTTGGGCACCACCATGG 501589 29 96.6 33 A............................ CCGCTGGTCTCGTGCAGGTCGGCTTTGCCCCAG 501651 29 93.1 32 ........T...A................ ATCGCCATGAGCAGCCCGTCCCGGCTCTCCAG 501712 29 93.1 32 ............A............C... TGGGTGCCGAACTTCTCGATCGTCGGCGTCAG 501773 29 69.0 0 .C.T.......AAG.......T.ACC... | ========== ====== ====== ====== ============================= ================================= ================== 22 29 97.8 32 GTGGTCCCCGCGCATGCGGGGGTGGTCCC # Left flank : CGCTCGGACGGGCCCGGCGGCGCGGGGGTGTGTACTACCGGGCCGACGAACTCCCGGCGCCGGTTCGACGGCAACTGCACCATGGCATGCCCCGCCGGGGCGGGTCGCGCCACCCCCGGTGGAACCGGAGGAGCGGAACGGGGCTGCCCGACCGGTGCGCGCGGGCCATCATGGACTCCTGGCTTACGACAGCGGCGGCGAGAAAACAGAACACCAGGACCGGGCGACACACTTCACCGGATCCTGGATCTCCACATGGCGGACGCACGACGGAGAGGAGCCCAGTTGACCCACCGGCCGACACATCGGAGCGGGCATGCGCCGGCTTCCCCACGAGAGGGCTGGACCACGGCGACGAAGCACCGCAGATGCGGAGGCGGGCTGCGGTGATGTCCCATCTCCCGCAAGACCTACATGAGACCCCTATGCGAGCTATGCCGGAATCTCAACTAGTAAGTAAAAACCATGCCCCCAAGCGATAGAGTCGCAGCTCACGGCCT # Right flank : CGCTTGGTTCGGGTTGCCCCGACCACGCCCCGATAGGCCCGTCCCTACTGCGGCAACCGAGGGCGTTAGGCCCCCAGGTCGCTCTCGGGAGCCCTGCCCTCAGACGCTCAGCGGTTGCCCCGGCAGGTCCTCGTTCCTACTCTGCTGGCCATGGTCGCCGCCGCTGGATATGACGTGTTGGTCGGTGCCGCCATGGACGCCCCCGTCGAGGGGTGGGACTTCGGCTGGCTGTCGGGGCGGGCCGAGGGGTCGGATCCGTCGTGGTCGTATCGGGAGCTGGCCCGGGTGTGTCTCGGCTCCGCCGGGGCGGGGCTCGATGTGGATACCGGGGGCGGGGAGTTGCTGGCCGGGCTGGGGGACCTGCCGGGGCGGATGTGGGCGACCGAGGGGTGGGCGCCGAATATCGCCGCTGCTCGGCGCAGGCTGGAGCCGCTCGGGGTGACCGTGTTGCCGGCTCCCGAGCCGGAGGTGCTGCCGTTGCCGGACGGGGCGGTGGATGT # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCATGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCATGCGGGGGTGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 4310629-4310946 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP054938.1 Streptomyces harbinensis strain NA02264 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 4310629 28 100.0 33 ............................ CGCCGACCCGCGCAGCTTCACGCTGAACGTGGT 4310690 28 100.0 33 ............................ CGCCGGGTCCGGCCAGCCCTTGGCGGCGGCGAG 4310751 28 100.0 33 ............................ CCCCGAACGCAACCGCTACCTGATCTGGGTCGC 4310812 28 100.0 33 ............................ GCAGCGCGTCCAGAGCATCTTCTCCACCGCGAA 4310873 28 92.9 19 ........................TG.. CATCGGCTTCACGCCGCAA Deletion [4310920] 4310920 27 67.9 0 ....G......-.CG..A...C.ACG.. | ========== ====== ====== ====== ============================ ================================= ================== 6 28 93.5 30 CTGCTCCCCGCACACGCGGGGTTGGTCC # Left flank : CGAGGTACGCACCTCACCCCTGTCGCGGGCGAAGGAAACCTGCGAGCTGGCCGGATTCGGCGACCGGGCGAGCGACTGGGACGCGCTGAAGGAGTGGGACTACGGCGACGCCGAGGGCCGCACCGGCGAGCAGATGCAGCAGGACCGGGGCGGCGAGTGGGTGCTGTGGCGCGACGGCGTACGCGGCGGCGAGAGCTTCGCGGAGCTGTCGGCACGCGCGGACGAGGTGGTGGCCTGGGCCCGCGAGGCGGGAGACGGGGCGGTGCTGTTCGCGCACGGCCACATTCTCCGCTCGGTGACGGCCCGCTGGCTGGGCGAGGACGTCCGCTTCGCCGCCCGCCTGAAACTGGACCCGGCCTCACTGTCGGAACTGAGCTGGGCCCACGGCAAGCCGGTGATCGCGCGCTGGAACGACACGTCACACCTGGAGGGGCGGACGGGCGCTGAGTAAAGTGAGTAAAAACGGCCCGACCGAGGGATAACGGCCCTGGTCAGAAAGC # Right flank : CGCTCGCGCCGCGAACGCCGCCACCTCCGGAGCGTGGGTGTGCGCGGTCAGGCGGTTCGCCGTGTGGCGGAGGAGGGTGCGGATGCGGGAGGAGTGGACCTCTTCCAGGAGGTCCAGGGCCTGCTGGCCCGTCTCCGCCGCTTCTTCCGGGTGGCCGCCTGCCCGCAGGTGGTCGGCGAGTTCGGCGGTGTACAGGGCGCGGTTGCGGACCAGGTGCGGGTCCTGGGTGGTGAGGGCGCGGCGGGCCGCTTCGGAGGCGCGGTGCCAGTCGCCGAGCGCCGCCCAGCAGTGCGCTTCCTGGCTGGCGAGTTCGGCGGCGTTGAAGAAGCTCATCCAGTCCGGGTCGGCGTCGTCCGGGCCGTGGGCGAAGGCCGTCTGGGCGCGGGAGAGGGCCAGTTCGCAGCCCTTGCGGTCGCCGAGGCCGGCCCAGCCGGCGGCCTCGCGCAGGGCGAGCAGGGAGTGGAGGCGGTGCGAGCCGGTCGCGCGGGCCGCTTGCTGGC # Questionable array : NO Score: 5.99 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACACGCGGGGTTGGTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACACGCGGGGTTGGTCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.70,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [43.3-21.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 5094276-5091992 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP054938.1 Streptomyces harbinensis strain NA02264 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 5094275 28 100.0 33 ............................ GTCAACGGCGGAGTCCTGGCCGAGCTGACCGGC 5094214 28 100.0 33 ............................ GCGGGGATGGTCCGCTTCTGTGTCTCGCGGCAT 5094153 28 100.0 33 ............................ CATGGAGGACAGGGCGAGGACGGTGCGCTCCTT 5094092 28 100.0 33 ............................ CTTGCCCAGGCCCCCGGTCACCGAGCTGGCGAT 5094031 28 100.0 33 ............................ TCGACCACGGCCGCCTCCGCGCTGCCGGGGCTG 5093970 28 100.0 33 ............................ TACCTGCTTGCCGTGATCGGCGGCGATGCGCGC 5093909 28 100.0 33 ............................ CTGCTGAGGGGTGATCAGGTCGGGCTACACGAT 5093848 28 100.0 33 ............................ CCTCGCCTGCTTCTCCTTCCACCACCGCGCCAA 5093787 28 100.0 33 ............................ GTCGGTGACGGCGGTCGTGGCCGTGGAGAACGC 5093726 28 100.0 33 ............................ CGTCCAGGAGGCGCGGGGGCAGGTGACCAGCAT 5093665 28 100.0 33 ............................ GCCCATGGCCAGCAGTTCCGCCTTGACGGCGGC 5093604 28 100.0 33 ............................ CGCGCTGCGCGCGCTCGGCGAGGACCCGTACTG 5093543 28 100.0 33 ............................ CCTATGCTTTTGCCCATGCTGAGGGTGTGCTGA 5093482 28 100.0 33 ............................ GCGCTCCGGGGAGTCCCGCCGAGCCGGTTCGAC 5093421 28 100.0 33 ............................ CGCCCTTCGTCAGCCCTTACCACCAGAAGTTCG 5093360 28 100.0 33 ............................ CCGTCGCCGCCTGGTGCTCGGGGAGCCGGTAGG 5093299 28 100.0 33 ............................ GCTCGTCCCGGACGCCGGCCTGCTGGACCTGGC 5093238 28 100.0 33 ............................ CCTCTGCATCCCGGCCCGCTGGTACGGGCCGGA 5093177 28 100.0 33 ............................ GGGGATGGCTGATGACGTACACCCCTGCCCCGC 5093116 28 100.0 33 ............................ CGCGAGCCGGGGGGTGGAGTCGAAGGCGTCGAG 5093055 28 100.0 33 ............................ GCGCCAGCAGCCGGAGCAGACGCCCGCGGAAAC 5092994 28 100.0 33 ............................ CTGGTGATGCGCGGGCTGTACGGCATCGGCGAT 5092933 28 100.0 33 ............................ GACATCCCCGCCGACCGGCCCCTGCCTGCCGGC 5092872 28 100.0 33 ............................ GGACCCAACGCTTTGAGCAGCGTAAGGCATGGG 5092811 28 100.0 33 ............................ CATCCACTCCGCGCCGATCGAGATCGACTGGGC 5092750 28 100.0 33 ............................ CGGCGGCACCCCGATCTGCTCCACACACCGGGC 5092689 28 100.0 34 ............................ CCGCTCTGTGCCTGTTGGTGCTGTCGGCGCTGGC 5092627 28 100.0 33 ............................ GTGGACGTCCGAGATGTTGCGCACGCCGGAGGG 5092566 28 96.4 33 .......................A.... CGCGCTCTCCGAGCTGCGCTCGGCGGGCCGCAT 5092505 28 96.4 33 .....................A...... CTCGGGCCGGGCGCACGTCTACGCAACGGCGCG 5092444 28 96.4 33 ...................A........ CAGCCGATCGCGGGTGTCCACCCGCACAACGGT A [5092422] 5092382 28 96.4 27 .................A.......... ACGGGTGCGGTCCTCTCCGGGCGGGGC 5092327 28 96.4 33 ......G..................... TCCGTGGTGGCCGCCGTGGTGGTGATGGTTGCG GG,T [5092317,5092320] 5092263 28 96.4 33 ........T................... CCGGGACGCGACCATCGCGTGGCTGACGGCGAT 5092202 28 96.4 33 ...A........................ GCTGATCTCCCTGGTCACCCTGGCCCGTGCCGC 5092141 28 96.4 33 .................A.......... CGTCGCCGTGCACGAGGACGTCGTCGGCCGTCT 5092080 28 92.9 33 ...........G.........A...... CGACCAACGCGCGACGCAGGTTCAGATGAACGT 5092019 27 89.3 0 ......................-.CA.. | A [5091999] ========== ====== ====== ====== ============================ ================================== ================== 38 28 98.8 33 GTCGGCCCCGCACCTGCGGGGGTGTTCC # Left flank : CACCGCCTCGGCGCCCTCCGGCCACATCCGTTGGAAGGCGGGGGTGGCCTTGCCGTAGTCATGGACGCCGCAGAGCCAGGAGAAGAACCGCCGCCCCTTGCCCGGTCCTCCTGCGATGTCGTCCACGACCAGCCGGGTGGAGGGGGCCAGGAAGCCGTCCCACAGGCGTTCGGCCACGGCAGCGGTATCGAGGAGATGCGAGAGCAGCACGTTCTTCCTGCCACCGGCCTTCCCGGCCGACTTCCCCCACAAGGCCGCCACCACCCGCTCCCCGCAGGCCGGCGCCCCGCCCTGACCATCACTCAATGTGCCACCCCTGGTACAACTGGTAGGTACTTCTTGGGATGCAGACCTTAGAGCAAGGCACTGACAATCGACGGGGGATGCGGCGGAGCCGGTCGGTTCCGCCGTGCCACCGGATGCGCAAGGATGAGGGAGGATCCGCGAACGTACCGAATGAAAACCGGCCTTCGGCCCGGTAAACGAGCAGGTCAAGAAGT # Right flank : TCGGCGCAGGCGAGGGATCGGGGCCGGCCCGCCGGTGTAGATCAGCGGTGTGCTGCGAAGTGGACGAAGGGAGCCCAGGCTTCTTGGCTGACCGTGAAGGGCGGGCGAGTGGTGTCCTTGGAGTCCCTGACGTGGATGGCCTGGTCGGCGATCGCGATCTCCACGCAGTCGTCGCCCTGGCTGCCGCTGTAGCTGGACTTGAACCAGGTGAGTCCCGTCGTGCCGCTGCTCATAGCTCTCCTCGCAGTTGCTCCAGCAGGTCCCGGGATGCGTGGGGGCTCAGGGCCTGCGAGCGCAGTGTGTCATAGCGCTGGCAGAGCAGACTCATCTCTTTTGCGTCGGAGATGAGCCGTCCGTTCTCCTGGCCTTCGGAGTAGCCGAGCCTGCGGCCTTCCGGAGTTTCCAGGATGCGAACGGGGCCGTCCAGGCACGCGTGGAGAGCTCCGTCGAGCGGCACCAACTGGAGGCTCACGTTGCGCGGGGCGCTGCGTTCCAGTACG # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGCCCCGCACCTGCGGGGGTGTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [18-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA // Array 4 5104361-5106097 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP054938.1 Streptomyces harbinensis strain NA02264 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 5104361 29 96.6 32 ............................C TGGCGGCGGTGCAGCGCGGTGCGTACCTGCCA 5104422 29 100.0 32 ............................. GCGACCGCGCTCGCGCAGCTCCGCGAGGCGCA 5104483 29 100.0 32 ............................. ATGCTGTGCCAGGTGCCCGCGCTGGGCAGCGG 5104544 29 96.6 32 ............................C GCGAGAGGGCCCCCACCTGGCTGGTGGGGGCC 5104605 29 96.6 32 ............................C GGCTCTGACGTGCCAGAAATGGCGCAGAACCA 5104666 29 96.6 32 ............................T CAGCGTGCAGGACAGCGTCGCGACGGACTCGG 5104727 29 96.6 32 ............................C CCGCGCGGCGTCACTGCCGACTGCCAGACCGC 5104788 29 96.6 32 ............................T CTGTAGCAAGGAAAGGGAAGATATGAATCTGG 5104849 29 96.6 32 ............................C AGCGCACACACCGGATATCAGACGGTAGAGTT 5104910 29 100.0 32 ............................. ACGATTACCCGGAGCGTTTCGTGCAGCTGTAG 5104971 29 100.0 32 ............................. CTTGGCCACGGCTGGCGGCGGGGCCCTTACGC 5105032 29 96.6 32 ............................C TGCCAGCCGGTGACGGCGAGCTGCCACTGCAC 5105093 29 96.6 32 ............................T ATCCCCCTCGTCGTCCGTCACCTCAACAAGGA 5105154 29 100.0 32 ............................. GAAAACTCGCCTCTCTGATCGTCCCGGTATTC 5105215 29 100.0 32 ............................. GTGGTAGCCGCGCCTGCGGGCATGACCGCGCC 5105276 29 100.0 32 ............................. GCTCGGGTGACGGTCTCCACCGCGCACAAGGC 5105337 29 100.0 32 ............................. CAGGACGAGCCCTCATCCACACACCCGACCGT 5105398 29 100.0 32 ............................. CCGCCTTGGCCTTACGCGCGTCCCGCCGCCCC 5105459 29 96.6 32 ............................T TCGGGAATTGGGGGCGCGGTATTCCGGAGGAA 5105520 29 96.6 32 ............................A CTTCAGCGGCGGGGCGTCCTCCTGGTCCAGGA 5105581 29 96.6 32 ............................T CCTCCACACCCTTGCATCTCGATCCGGCGGCA 5105642 29 100.0 32 ............................. CCCGGCGACGCGATGCCATCACTGAGGCAGGT 5105703 29 96.6 32 ............................T GATTCATGATCGCCTCGCGCTGGGCCATCGTG 5105764 29 100.0 32 ............................. GAGCCCCGGCAGTGTTGGAGCACTCCCGGGGG 5105825 29 93.1 32 ..............T.............A TGCCGGTCGGGGAGGGCGGCGATCGCGGAGTA 5105886 29 93.1 32 ..............T.............C CACCACGGCCTGGTCACCCCGGAGTCGGTGGA 5105947 29 93.1 31 ..............T.............C GCCGCCTGATGGAGCGGCTGACCCGGTGTGG 5106007 29 100.0 32 ............................. ACGCGCGGCGTGCGCGGCTTCGCCGACGCCCT 5106068 29 86.2 0 ..............T......G..A...C | G [5106085] ========== ====== ====== ====== ============================= ================================ ================== 29 29 97.3 32 GTCGGCCCCGCGCCCGCGGGGATGTTCCG # Left flank : CGTCCGGTGTGAACTGGGCGGACGACCGGGACAGCCCCGCGGAGGCGGCGTTCCCCGGGCCGGAAACCGCCTCCCGCCCGGCCTCCATGGGCGACCAGCACATCGCCGTCATCGGCCCCGAGTTCGAGGAACCCGACAGCGACCCGAGGACGTCCGGATGACCGTTATCGTGCTCATCGCCGCCCCGGAAGGACTGCGTGGCCACCTCACACGCTGGATGGTGGAGGTCAACGCGGGCGTCTTCGTCGGCAACCCGAACCGCCGGGTCCGGGACCGTCTGTGGGACCTCCTGGCCACGCGCATCGGCGACGGCCAGGCCGTGCTCGTGGAACCCGCGGCCAACGAACAGGGCTGGGCGGTCCGCACCGCCGGCCGCGACCGCTGGCGTCCGGTGGACTTCGACGGCCTGATCCTCTCGGCACGGAACAGGAGGTGAGCCAGTGCCGACACAACCGAATGAAAACGGAGCCCCGGCACGATAAAACCCCAGCTCAAAAAGG # Right flank : CTGTGTGCAGCCAACAGCCGCACTCAGCACGACGCGCGCAACCGGCATACCTCACTGGGGACTTCCGTCTGAAGTAAGTCGTCTAGGCACCCCTGACACACAGACGCCCCCGCCCCCGCTTAGCAGCGGGCGGGCAGGGGCGCGGCGGCGTCCATGCCGTCAGATGTCGCGGAAGGTTTCGATCTGGGCGCCCACCGAGTTCAGGCGTTCGGCCAGGTCCTCGTAGCCGCGGTTGATCACGTACACGTTGCGCAGTACCGACGTGCCCTCGGCCGCCATCATGGCCAGGAGGACGACCACCGCCGGGCGCAGGGCCGGGGGGCACATCATCTCGGCGGCGCGCCAGCGGGTGGTGCCTTCGACCAGGACGCGGTGCGGGTCCAGGAGCTGGAGGCGTCCGCCGAGGCGGTTGAGGTCGGTGAGGTAGATGGCGCGGTTGTCGTAGACCCAGTCGTGGATCAGGGTCGAGCCGTGGGCCGAGGCCGCGATCGCCGCGAAGA # Questionable array : NO Score: 5.71 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.59, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGCCCCGCGCCCGCGGGGATGTTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGGCCCCGCGCACGCGGGGATGCTCCG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //