Array 1 70400-73488 **** Predicted by CRISPRDetect 2.4 *** >NZ_FUXG01000007.1 Oceanospirillum multiglobuliferum strain ATCC 33336, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 70400 28 100.0 32 ............................ TGCGAGAGCTGTAACATTGTTATTAGCTCCGG 70460 28 100.0 32 ............................ TCAATCAGTGCATTAGACTTCCAGACCATTCC 70520 28 100.0 32 ............................ ACATAAATAAGTAACATCTGCATACCAGAAGC 70580 28 100.0 32 ............................ GATTGTGTGCTCCGGTGTTTTCATCACGTAAG 70640 28 100.0 32 ............................ AGAAGGCGAAGTAATCGGAGATTGGCGCGACA 70700 28 100.0 32 ............................ TAGAGCTTGCCAAGCTTGAGCCGTCAAACCGC 70760 28 100.0 32 ............................ ATGACGCAAGCCACGAAATATAAACTCTGTGC 70820 28 100.0 32 ............................ AGCACGAAGTAAAGCGCATCACGCTGCGCGTT 70880 28 100.0 32 ............................ CACCAAGCGAACCAAAGTGCAAACCGAAACAA 70940 28 100.0 32 ............................ GGAATGTTACCGACTGACATTGAGTCAGTTTT 71000 28 100.0 32 ............................ AACAGCCTACAGCAGACATGTTCACTTCTGCT 71060 28 100.0 32 ............................ TACAACGGTGTGATGAGCAGCGTTAGCGATAA 71120 28 100.0 32 ............................ AGTCGCTCTAGTTTGCCGTCGTGCAGCGTCTC 71180 28 100.0 32 ............................ TTAACTCAGGCCAAGTCTGATTTATCTAGACT 71240 28 100.0 32 ............................ ATTGACGACAATATTAGACCAACCTTGTGTGA 71300 28 100.0 32 ............................ GAGCGCATCAGACATGGCCACCAGCTCTTTGG 71360 28 100.0 32 ............................ TGCTCCAGAAGGCCGCGCAAGTATCGCGGCTC 71420 28 100.0 32 ............................ ATCCGTACGCGCAGGTTAGCTGTCTACGCACA 71480 28 100.0 32 ............................ AGATTTGATCTTTTCTATATCTATGTTCATAA 71540 28 100.0 32 ............................ CTAGTTGACTAAAATTGAAAACAAAAAAAACC 71600 28 100.0 32 ............................ ATAGTCCAGCCATTTTTCTGCGACGCCACCGA 71660 28 100.0 32 ............................ TGACGTAGGCGACGGAACGACTTGGCTAAAAC 71720 28 100.0 32 ............................ AAGCAAATCAACATCATAGTGCTGTTGTCTAA 71780 28 100.0 32 ............................ GATCAAAGCGGCTCGGATTGCCTGAAAATTCA 71840 28 100.0 32 ............................ AGCTCTTGCGCTCAGGTCGTTCGGTGTCGGAT 71900 28 100.0 32 ............................ TGAAGGCTGCTATCAGCCTTCTCTCTTCCTCA 71960 28 100.0 32 ............................ GCTTAGATAGTCTTCGATCAGTTCTTGCAGTC 72020 28 100.0 32 ............................ CGTTGTAGTCAAGCAATACAAAGCGATTGCAA 72080 28 100.0 32 ............................ TATCTCAAGTTAGCGAGCTTACAGGGCAAAGC 72140 28 100.0 32 ............................ CATAGAAAGCAAAAGTAAACACATTTTTAGGT 72200 28 100.0 32 ............................ AATTAAAGCCATAATGCCACCTGCTCAAAACT 72260 28 100.0 32 ............................ TTCATAAACCATTCAAAAACTTCTTTTGTATC 72320 28 100.0 32 ............................ ACCGACCGATTCATGTCGCCAGTTGATCAGGC 72380 28 100.0 32 ............................ TCTGCGACTTATAGAAATAAGTTGCCTAAAGA 72440 28 100.0 32 ............................ TTAATGTGAACGACCGCAGGTCACAAAAAGAA 72500 28 100.0 32 ............................ GCTTGCTTGTCTCAAATCAAAGGTGGGGCTAA 72560 28 100.0 32 ............................ CGAAAAGTCTCATACATAAGACAAAGTAACGG 72620 28 100.0 32 ............................ GCTTGCATCCCATTCTCGAATTACTTCTTTAT 72680 28 100.0 32 ............................ AACTCTCGCCGTGCTCACAGATCAAAGCCGTT 72740 28 100.0 32 ............................ TCTTGGATCGCCCGGGTAACGCAGCCTTTCAC 72800 28 100.0 32 ............................ AGCATGGAGCGCTGGCACTTATAGCAGAGGTT 72860 28 100.0 32 ............................ TTAATGTAGTTGAACGGATATTCAGTAGCAGG 72920 28 100.0 32 ............................ TATAATACCTTTTTTGTTATCTATACTATCCT 72980 28 100.0 32 ............................ ATCAACCTGTCGGCTGTCGGTTGCAGCTTGTC 73040 28 100.0 33 ............................ CCTGATGCAGCTAAACAACAAGTGATCAATAAC 73101 28 100.0 32 ............................ AGATGATTTTAAAGCTGGGCGCTGCGCTTGAA 73161 28 100.0 32 ............................ GATTATGGTTTCAACTGGCTCAGTTACGCACC 73221 28 100.0 32 ............................ TACAGTATTTCAAAGCACCGCAACGAATACTA 73281 28 100.0 32 ............................ ATAAAGAAGTTTTCAATAAAAAATAAGGTTGA 73341 28 100.0 32 ............................ TTCATGTCCGCGCTCTACAGTCCACTGATCAT 73401 28 100.0 32 ............................ TTACGATGAAATTCGATACTTAAAGCAGAGCC 73461 28 85.7 0 ........................AGTT | ========== ====== ====== ====== ============================ ================================= ================== 52 28 99.7 32 GTTCACCGCCACACAGGCGGCTTAGAAA # Left flank : ACCCATCTTAAGTCGATTCAGCCAGTGCCTGAGGACGTGCCTCATATCGCTTTTGTGCGTCAGCGAGTAAAAGGACAGACCCGTATAGATCAAGATATGGCGTCTAAGGCTAAACGCTGGGCAGAAAAGTCTGGGCAAACAGTGGAGGAATGCTTGCAACAGCTTGCAAAAACCAAACCTTTTCCCCACTCAAGCAACGCTTTTATCTGGATGGAAAGCTTACAAACCAAAGCAAGCAACCCAGAAGGTTCTGCCAAGTTTCCGCTTTTTATCGAAAAGGTAGAGGTGAATGCAGCAAATCAGGGGCTTTTTAACTGTTACGGGTTAAGTGCAGCGAAGGGCGACAATATCGCAACAGTACCTAACTTTTGACCTAAAAATTAGCTCTTTAAAAATAATAAATAAAAACAGATAGTTACAACACGGCTAAAAATAAAGGTATTTTTCGATATTTTTATCTAACAGCTTGTTGTAACTATTTTTTATGGTAAATTCTTACT # Right flank : TCTTAGTGAAACCACTCAAATACCTAGGGTTTTTACTAGTTGTTATGCAAACAAATAATATGTAGTTTTAAGAGCAGTTTGATAATTATCCCAAATATATTTTTGGCAAGTAAACTAGTGTTTTTTTGTATGTTTTTCCATAGAAATGCTGTTCTACAATGCAGGGTTTTTTATTTATTTTTGGTTCTATTTAACTTATTAAGTGAAAGTTGTATTTTAATATAAAGGTGTTGGCATGATTGAAATTGAAATGACTACATTGTCTTCTGCATCAAAAGCTATAGATCATAATGCTGAGCTGTCAACGCAGTTGTTAAGTAAGTGTACAGATATAGAGAAAGCAGTTAAGGCGCTTAAGCCTGGGGCGCTGAGCAAGATAGTAACTGCTATGAAGGGGGTAGGTACAGCAATTAGTATTATTACATTTTTCATGGAGTTAGGGCAGGAAAGTGATACGGACAGAATATTGAAAGAAATTTCTGTGCTCAGTGGGAAAATAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACCGCCACACAGGCGGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACCGCCACACAGGCGGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.70,-9.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 2-1049 **** Predicted by CRISPRDetect 2.4 *** >NZ_FUXG01000046.1 Oceanospirillum multiglobuliferum strain ATCC 33336, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 2 28 100.0 32 ............................ GATCAAAGCGGCTCGGATTGCCTGAAAATTCA 62 28 100.0 32 ............................ AGCTCTTGCGCTCAGGTCGTTCGGTGTCGGAT 122 28 100.0 32 ............................ TGAAGGCTGCTATCAGCCTTCTCTCTTCCTCA 182 28 100.0 32 ............................ GCTTAGATAGTCTTCGATCAGTTCTTGCAGTC 242 28 100.0 32 ............................ CGTTGTAGTCAAGCAATACAAAGCGATTGCAA 302 28 100.0 32 ............................ TATCTCAAGTTAGCGAGCTTACAGGGCAAAGC 362 28 100.0 32 ............................ CATAGAAAGCAAAAGTAAACACATTTTTAGGT 422 28 100.0 32 ............................ AATTAAAGCCATAATGCCACCTGCTCAAAACT 482 28 100.0 32 ............................ TTCATAAACCATTCAAAAACTTCTTTTGTATC 542 28 100.0 32 ............................ AAGGTTTGCAGCAAGCAAGAACTCTTCTGTAA 602 28 100.0 32 ............................ ACCGACCGATTCATGTCGCCAGTTGATCAGGC 662 28 100.0 32 ............................ TCTGCGACTTATAGAAATAAGTTGCCTAAAGA 722 28 100.0 32 ............................ TTAATGTGAACGACCGCAGGTCACAAAAAGAA 782 28 100.0 32 ............................ GCTTGCTTGTCTCAAATCAAAGGTGGGGCTAA 842 28 100.0 32 ............................ CGAAAAGTCTCATACATAAGACAAAGTAACGG 902 28 100.0 32 ............................ GCTTGCATCCCATTCTCGAATTACTTCTTTAT 962 28 100.0 32 ............................ AACTCTCGCCGTGCTCACAGATCAAAGCCGTT 1022 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 18 28 100.0 32 GTTCACCGCCACACAGGCGGCTTAGAAA # Left flank : AG # Right flank : TCTTGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACCGCCACACAGGCGGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACCGCCACACAGGCGGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.70,-9.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [1.7-5.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 68055-67245 **** Predicted by CRISPRDetect 2.4 *** >NZ_FUXG01000004.1 Oceanospirillum multiglobuliferum strain ATCC 33336, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 68054 28 100.0 32 ............................ ATTGTAAAAACACTTTTCAGTAACTTTGCACC 67994 28 100.0 32 ............................ GTTACTTTTCAAACGATCTAGCACAAATTCAG 67934 28 100.0 32 ............................ TAAAGGTTACATTCTCGACGGACTAACGCGCA 67874 28 100.0 32 ............................ ATGTTAGCAATATCCGCAAAGCTGCCAAAGAA 67814 28 100.0 32 ............................ TGAAGAGTACGAAGCAATCAAGCACATGGAGC 67754 28 100.0 32 ............................ TGACCTTGAACTACGCACGTAATCACAACCCA 67694 28 100.0 32 ............................ GTTCGGCGCAGTCACTTTTAATACTGCTACAA 67634 28 100.0 32 ............................ TTACCTTGTCTGATTTCGCCCAAGGCTTCATG 67574 28 100.0 32 ............................ TGATGCCTGATTAATGACCGCGTAAACAGCCT 67514 28 100.0 34 ............................ CTGAAAAACTTCTAAACAATTTTCTTCTCATATT 67452 28 100.0 32 ............................ ATAGACTAACCTGCCAGCTTTATCTGTAATGC 67392 28 100.0 32 ............................ TGAACACCGCAGGTCGAGCGCGCAAGTGGTAC 67332 28 100.0 32 ............................ TTTAATAAGCTTATCGAAAGTGTTTTCACCTT 67272 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 14 28 100.0 32 GTTCACCGCCACGCAGGCGGCTTAGAAA # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTTCACCGCCACGCAGGCGGCTTAGAAAACACAGCGTGGCCGGAAAAACCTAAAAAAAC # Right flank : TCAGTGATAACTCCTTTGGCTGGGCTAGAATCTGCGCCACTTTCTTAGCCATGCAAAGACCAAAGACATTCACAGTTGCTCGTTATCAGGTCAAAAGATAATGCTTACTGGCCGTTATTTGTTGTGTACGCCTTTTTTGATACCCCATCTCAGCAAAGGTTTTCAGCTCTTGGAGTAGAGGATGAGGGGGTAAAGCTTGATCTATTTCAGGCGTTACTATAATACCGAAACTCTCTGGTTGCTGGTGGATTTTACCGTCTGAAAATAGAATGGCAGTATTAATGATGTCGACCATAAAGGTCGTCAAAGCGCACAATATCGTCTTCGCCTAGGTAATGACCACTTTGCACCTCAATTAAAACAAGATCAATTAGCCCTGGGTTTTCCAGCCTATGCTTGTGTCCTGCCCGAATAAAAGTTGACTCATTGGTGTCCAATAGTAGCTCTTGGTCATCATTTACCACTTTTGCTATACCGCTTACAACTACCCAGTGTTCGCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACCGCCACGCAGGCGGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACCGCCACACAGGCGGCTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.90,-8.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [51.7-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 69412-68965 **** Predicted by CRISPRDetect 2.4 *** >NZ_FUXG01000004.1 Oceanospirillum multiglobuliferum strain ATCC 33336, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 69411 28 100.0 32 ............................ AGTTGGCACGATCAGTGACGCTGAAATATCTT 69351 28 100.0 32 ............................ ATTGCAGAGCAGTATAAATTACAGCGTTTCAA 69291 28 100.0 32 ............................ AGTGCCACCAGCATCAATAATCTGACCGCTAT 69231 28 100.0 32 ............................ CAGTTCTCGCACAGTGGGTACAAAATACATAC 69171 28 100.0 32 ............................ AATGTTCGATCCTAAAGAACTGAAGAGAAAGC 69111 28 100.0 31 ............................ ACATAAAACCGTAAGTATAAACCGGTTCAAA 69052 28 100.0 32 ............................ GCCAGCCAGACCCCAAGGCTTACGGGTTTGGC 68992 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 8 28 100.0 32 GTTCACCGCCACGCAGGCGGCTTAGAAA # Left flank : TAAGCAAATTAATGGCTTGAACTACTGAATCTTTATTATCTGGCTACAGCATCACCCAGATACAGTATCCAAAATACAAGACACTTTGATTGGTGATTATACCTACCTTGAGGCTGAATCGGTGAATTTATTAGCGTAAACTTCAGTCTAATATTGCAGTGCACCCTTCTCTAATACCAGCAAGCAAGACCGTAAATTGCTGACGGACTATGGCATAAGATTCAGCATGGGGTATGTAGGCACGTTTTGGGAGAGCATTTTTTGCTAGCTTGAAATAGGACTGGTTGTTCAAAGTTAGGCAGACTTCAAATATGGATTACTTTTAATAATTGAGCGAAGGGCGACAATATCGCAACAGTACCTAACTTTTGACCTAAGAATTAGCTCTTTAAAAATAATAAATAAAAACAGATAGTTACAACACGGCTAAAAATAAAGGTATTTTTCGATATTTTTATCTAACAGCTTGTTGTAACTATTTTTTATGGTAAATTTTTGGT # Right flank : AGCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACCGCCACGCAGGCGGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACCGCCACACAGGCGGCTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.90,-8.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: R [1.7-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 90861-93024 **** Predicted by CRISPRDetect 2.4 *** >NZ_FUXG01000004.1 Oceanospirillum multiglobuliferum strain ATCC 33336, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 90861 28 100.0 33 ............................ TGAAAGGTGCGCGCTATTTTAGATCGCGCCGCA 90922 28 100.0 33 ............................ TATTATCTGGGTCTTTTTTCATTCAGTGCTCAG 90983 28 100.0 33 ............................ TCATCAAGCTTTGCAACGCATTAGCGATCTTCT 91044 28 100.0 33 ............................ TTCGCTAGTGCTGATACGGGTTGCAGGCGCACA 91105 28 100.0 33 ............................ TCTCAGCACTGGTCGCTTTGAGCGCACGCAAAG 91166 28 100.0 33 ............................ CCTCTTTACTGACAAGCGTACGTGTCTTGCTAG 91227 28 100.0 33 ............................ TTCAGCGAGCACCACGCGGGGTTGGTTCGGCTG 91288 28 100.0 33 ............................ TACAACTGTTAGCATGATGGTGTTTAGATTATT 91349 28 100.0 33 ............................ CAGGCAGCCGCAGAAATGGCGGCATGGGGTGGC 91410 28 100.0 33 ............................ TGAACTGGCATGGAAAGCATGGCTAACGCTGGC 91471 28 100.0 33 ............................ CGTCAACCAGCGCCACCTTGATATTCAAGTCCG 91532 28 100.0 33 ............................ TGTATCGTAACCGCTCCAGTTACTTGACGATGT 91593 28 100.0 33 ............................ TTGTACCGACAGTACCTGACAGCGACTCGTTAA 91654 28 100.0 33 ............................ TCAGGAATGGGCAACCGCTGCGGACACAAAAAG G [91671] 91716 28 100.0 33 ............................ CAGACAAACCGACCAGGCGACTTTCTACAGATG 91777 28 100.0 33 ............................ TAAAGAACATGATACTGATAACACACTTTTCGG 91838 28 100.0 33 ............................ TAAAGAACATGATACTGATAACACACTTTTCGG 91899 28 100.0 33 ............................ CATTGATAAAAAGATTTTTTGGACGCTGCTCGC 91960 28 100.0 33 ............................ CTTCTGGGGCTATTCTAATCGTCTCGAAGTCTT 92021 28 100.0 33 ............................ CGGATTTAGGCCGTTTTCGTGTTTGATAATGGC 92082 28 100.0 33 ............................ CTTCATACATCCTGTATTCCGTACTCTTCTTCG 92143 28 100.0 33 ............................ TATGGGCAATGCCCCATGAAGGTTGATTTTAAG 92204 28 100.0 33 ............................ TATGCTGCTTGAATTTTTTGGAAAATTTAAAGA 92265 28 100.0 33 ............................ CCTGTCACCGTTGAGATGGCCTGCGTACCCGTG 92326 28 100.0 33 ............................ TCACCCGCCGCCGCGATAACGCTAGCGATAGAA 92387 28 100.0 33 ............................ TATTAATACTCTGACCAGAAGTCATATAAAAAA 92448 28 100.0 33 ............................ TCCCCGATACCTTTAAGTCTGTTTTGGCTTATA 92509 28 100.0 33 ............................ CACTAAAAGTAAGTTTTAGTAGTATTGCATTTC 92570 28 100.0 33 ............................ TGCCGCAAATGCCACAGATGGCAGGCTCAGGCG 92631 28 100.0 33 ............................ CAATGCTGTTGATGCAGTGCAAATCCTGCTGGC 92692 28 100.0 33 ............................ CTCACTAAGATCTTCGTCAACTATTGCGTGATT 92753 28 100.0 33 ............................ TGTTACAGCCTTGGCAGGTAAAATATCTGATAA 92814 28 100.0 33 ............................ TGCTACCGATCGCTTGAGCAACTGCCGAATCAG 92875 28 100.0 33 ............................ TTCAAACGCACTTTCAAGCGTGCCATCTTCACA 92936 28 100.0 33 ............................ CTGACAGTAAAATTTCAAACTGACAGAGAGTAA 92997 28 96.4 0 ...........................A | ========== ====== ====== ====== ============================ ================================= ================== 36 28 99.9 33 GTCTTCCCCACGCCCGTGGGGGTGTTTC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTGAGTCTTCCCCACGCCCGTGGGGGTGTTTCCGGTGAAGAAAGACGAGTGACTGAGAATCCAAA # Right flank : AGGTGTGCCATTTCATGATGTTAAAAAGCAAAGTTCCATCAAAACAACGCTATTTGATGATCTGTGATCGCACGAAATGACAGCCCCATCAAAGGTAATATTGCATCGACAATGGGAATGATCTGTTTTTCAACATAGTGTTCGTAGTCGATAGGACTACTGTGGTACTCCACCACTTCAGGGCCATTGATGGTCATCAAATAAGCCACTTGCCCCTTGTGTTGATATTGAAGACGTTTACCTTTCTTTAGGTTGATGTCGTCAGCTCGGCGGGCGGCTCTAACGTGCGGGGGACTATTTTTCACGTAGGCACTTAAGGGACGTCGCAATCGTTTACTGTACACCAATTGATGATCCCGTTGGCCTGCACGCAGTTCTGCGAGGGTATTCAGAATTAATGCACTGGGGTTTTCATTGTGAAAAATCTGTAAATAGAGTGCTTGTTGTAAGGTTTTAGCCAAATCTGTCCAATCAGAACGGATCGATTCCAGCCCTTTAAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGCCCGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCACGCCCGTGGGGGTGTTTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [45.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.64 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //