Array 1 428941-427538 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHLGI010000002.1 Clostridium perfringens strain QHY-7 NODE_2_length_851306_cov_163.339540, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 428940 29 100.0 37 ............................. GATTTAATGACAGATAATGCTATAGAAGGAACTAATG 428874 29 100.0 36 ............................. TTTTCATCTGTATACATACAATCTATAGTTTGTCCA 428809 29 100.0 36 ............................. ATGTGTAAATGGAGAATCTTCAAATTTAAAACCATA 428744 29 100.0 37 ............................. GTAGTTGCTCCAGTAGTTGCTGAATATGGTTTTGAGA 428678 29 100.0 37 ............................. CCATTAAGGTAAGGCACTTGTACTCGCAATATAAGTA 428612 29 100.0 36 ............................. GGAAAAAATACCCTAAAAGTTGTGAGAAGTGTTCAC 428547 29 100.0 36 ............................. AAAAGGAGAGTTAAAAATAACTACTGATGATGGAGA 428482 29 100.0 36 ............................. TATGAAGATGTAGAAAGCTGTATGAATAAAGCTAGA 428417 29 100.0 35 ............................. CTTTTTACCACCCATGAAATATTCCCCTTTATTCA 428353 29 100.0 37 ............................. TCAGAATAAAATTCACTTACATAATCCATAGGGGTTT 428287 29 100.0 36 ............................. TTCTCTATATAAGAAACATGAGCTTGGGTAATTCCT 428222 29 100.0 37 ............................. ACATGCAAACGTGAATTTGAAGCTGATGATATAGAAG 428156 29 100.0 36 ............................. ACTGTTAGAGTTCTTTGGGATATAGCAGACTATCTA 428091 29 100.0 36 ............................. AGAATAGTATACAAGTTCTTATAATAAATATTATGC 428026 29 100.0 36 ............................. TATATAATATCATCATCACCCGTGATTTTTATATAT 427961 29 100.0 37 ............................. GAAAAGTTAGAGGAAAAAATTTATAGAAGAGAGAGTT 427895 29 100.0 36 ............................. TGTTTCATGTGTACCTTGAATAACTAAATAACCATC 427830 29 100.0 37 ............................. ATAGAAGGATCTTATGACGAATGGTTATATGGATGGA 427764 29 100.0 36 ............................. TTCTGATATGGCAAATGAAGTTTTAACAGCTTACAA 427699 29 100.0 37 ............................. AAATTATTAGCTGCCCATTTTAATTGAGTATAAGTAG 427633 29 100.0 37 ............................. TTGCTTTTTAAGACACATTCTAAATATGTGCCTTCAT 427567 29 86.2 0 .................GAA....C.... | T [427540] ========== ====== ====== ====== ============================= ===================================== ================== 22 29 99.4 36 GTTTTATATTAACTATGAGGAATGTAAAT # Left flank : AACTTAGAAATATAATATCTTTTGATATAATACCTCAATGTATTTATGAGAAAAATGAATCAGAAATTGAAAGCTTACTTGAAATTATAAATGATGAAAAAACAGATAAAATAAATAGAATAAAATCCATAGATAAAATAAAAAGTTTTACAGTATCAGTTGGGCAATATGATATTGAACTTTTAAAAAATAAACTTATTATGGAGTTAGAAGTAGGAAAGTATGAAAGAATTCCAGTATATAAATGCAATTATTCAGAGTTAGGATTTACTAGAAACACTAAAGAAGATGTATATGATAATTTCATATAAAACTAATTTTGCAGTAGATCTATTTTCTTATAATACTAGCTGTAACCAAGTAATATCAATGGTTAGAAGGAGATTTTTATTGATACACTAAAACATTACTGATGGTCTACTGCAAAATTTTAATATTTATGATAAAATTAACAATAGAGAATGAGTCTATTACTAGCTTTCAGCATTTTGAAATTTGGG # Right flank : ATATAAAAAGCATCTTCAAACTTAAAATCATACTTTTAAACTTATAATTTTTTGTTTCAATAGCAAGTGAACCTAATGAAGATATATTTCCAACAATGTTTTGGCTTGCTTTATATACAACATTGCCATTTCAAAGTGTAATAAATCTTTTAGTAGGCTATAACATAGAGAGTTTGTCATATTTAATACTTCCAACATATATGGTAACATTAAGCTTATTAAGTTATAAGGTACTTAAATTTAAACCTCAAAAAAATAAACAAGATAAGTAATTTTAGTTTTATAATAAGAATTAAAAAGTAAAATGGACATGATATCTGTCCATTTTTACTTAATTATTAATATATACTTATTAAATTAAATTTAGAACTTTGAATCTAATAATCTATGCATTTAGCAGTTTAAATCTAATAGCTCACTTGAAATTTCCTCAAATCTTTCATCAGATATACCAAGTTTTTTCTTAAATATATCATCATCAATTCTAGCAACAATAACCT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGAGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: R [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //