Array 1 226961-228978 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAABLA010000001.1 Moraxella catarrhalis strain AS012768 AS012768_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ =================================== ================== 226961 28 100.0 32 ............................ ATTCATAGTAGTCTCTCTTATAAATTAGTAAT 227021 28 100.0 34 ............................ ACCTCGCCAGTTGAGGGGTGGATGTTGTTCCATT 227083 28 100.0 33 ............................ AATCAACGCCATACGCTAACTGTGAAAATCCTC 227144 28 100.0 33 ............................ TACTTAATGCGACCCAAAGCACGCTTGGCGGCA 227205 28 100.0 34 ............................ AACATAATGATGCCTCTTAACATTTCAATTATCA 227267 28 100.0 32 ............................ TTAGTAGAAGTTGATTGCTGAGGTTTCTTAGA 227327 28 100.0 32 ............................ AGTGGCAATAAACGCTGTGAACCTTACCACTG 227387 28 100.0 32 ............................ TATAGGCAAGCCGTCGGCTTGTTCAAAACCCC 227447 28 100.0 32 ............................ TCTGGCAGGAATCTAGAAATTAGTGGGATAGC 227507 28 100.0 33 ............................ AACTTTAAGACCTGCACAGAACAGAGACAATCC 227568 28 100.0 32 ............................ AAGCTTATTGCTTGTAAACCCTCAACATGCAT 227628 28 100.0 32 ............................ TTCTGACGCTTGCTTATTGCTGATTTTTTTAG 227688 28 100.0 32 ............................ AAGCAATTAAAGCGACTTAAAAACCGCCATCG 227748 28 100.0 32 ............................ TCTAGCGTCGCTATATCCATCTTGCCAACCCA 227808 28 100.0 32 ............................ TACTTTCAAGCCTGCACAGAACAGAGACAATC 227868 28 100.0 33 ............................ ATTATTTTTATCATAGCCTTCAAGTTCGTCTAT 227929 28 100.0 32 ............................ ACATCATCCTCACGGATGACTGCTTCGTAGTT 227989 28 100.0 32 ............................ TCTTCACGATTTATTTTATGCATTTCGCATAA 228049 28 100.0 32 ............................ TTTGTTCGATTGTGGCAAATGCTTGTTAATAA 228109 28 100.0 32 ............................ GTCATAATGTTTCATTACTGCAAGTACTAATC 228169 28 100.0 32 ............................ TTTTAGGCAAGGCGTGAGCCTTTTAGGCAAGG 228229 28 100.0 32 ............................ TTTAAATACTTTTTGTCTTGTACTCTTACGCT 228289 28 100.0 32 ............................ CATACTCGCTCATAAGCTTCAACCCCTGCTTA 228349 28 100.0 32 ............................ TAAACACCTGATTCTAGAATTGTAAAGCCACC 228409 28 100.0 32 ............................ AAGGATTTAACTTTATACTTGTTACTGGTATT 228469 28 100.0 32 ............................ AGTAGGTACAATCTTAGCAACTGACGCAGTAG 228529 28 100.0 32 ............................ ATAACCTGCTAAAGTCGTTGGCTTATTGGTAA 228589 28 100.0 31 ............................ AACTGTGCGTCAGTCAAATCATCCGCATTAA 228648 28 100.0 32 ............................ AATAGGCAAGCTATCCGCATTGCCCTTTAAGC 228708 28 100.0 35 ............................ ATTAACACCGTCCGCCAGCTTGGCGTTGGTGGCTT 228771 28 100.0 32 ............................ ATTTCGTCTTTATCTTCGCTATCTGGCATATT 228831 28 100.0 32 ............................ GTAATGACTTCCCCAGTCTTGATATCAAACGG 228891 28 96.4 32 ..................T......... GTCAATGCGACTGTTTGACAGCTTGAGCTCGC 228951 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ =================================== ================== 34 28 99.9 32 CTTCACGACCGCACAGGTCGCTTAGAAA # Left flank : AAGTGCCTGTGCCAAGTAAAATTACTGTGGTATTGGCGATCGGAATGTTATAATAGTGGTTTTGGTATTTCGTTTCGGTCAGATATAAGATACGCCCGTCTTTTTGCATGACTCGGCAATGCTCAAGATAAAATAAATTCGCCCGTTTGGAATGTAAAATTGCTTTCAAATCGGTCGGTTTGAGCGTATTCATAATGATACAAATCCATGTTTAATGATTCAATTTTATCCTAACAATTTTCAACATTATTTAATATGATTTTATTGGATTATAAACTAAAAATAAATTTATACCAATCATTTTTTAATTGTATTTAGCGATTAAAATGTTTTAAGATAACCCAACCAGAAGATGGCAAAATAACGGATTGACCCTTTATTTTTTACTATTTAAAAACTTGAATATTTTCAATAAGTTATAACATTCAGATTTTTGATTGGGTTTTTGACAAATTTTATCATAATGGCTTGTTATTTCTTATTATTTTGGTTTATAATAA # Right flank : ATTTCGTTCTACAACTACGCTGATTATTTAAAATTTTTGTACCAATCCCTTGAAAATTTTATCCTTAACCATTATGAAGATGGGGAATTTATATTAACTTTTTTGGGGTAATTTATGACCGAGCAAACCACCGAACAAACCACCATGGAAGAGATTACGGCTGAGGCGACAACCGAGCAAGTCGAAGCACTTCACAGCCAAATCCAAGCACTAGAAAGTGAAGTCAAAGAAGCCAAAGAGACTGCTGCGCGTGCCAATGCCGAAAGCTATAACGCCCAACGCCGCATGGAACAAGAAACCGACAAAGCCAAAAAATTTGCACTACAAAAGTTTGCCAAAGAGCTTTTGGAGGTGGTTGACAACCTAGAGCGTGCCATTAAAGATGCTGAAGAGACAGGTGCAGATGACGCATTACTTGAAGGTATTCGCCTAACACATAAAGTACTGCTTAGCGTCCTTGAAAAAAATGGCGTCGTGGCCGTGGGTAATGTCGGTGATGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACGACCGCACAGGTCGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTTCACGACCGCACAGGTCGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.40,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //