Array 1 10353-9328 **** Predicted by CRISPRDetect 2.4 *** >NZ_QRIC01000002.1 Dorea longicatena strain AM22-22 AM22-22.Scaf2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 10352 36 100.0 29 .................................... TGGTATCAGCCTACCGACCCGGCGGTTAA 10287 36 100.0 30 .................................... TTCCCCTTGTACTGTGAGTAACACACTATC 10221 36 100.0 30 .................................... TATACATAAAGAAACAGGACGTGCGTATAT 10155 36 100.0 30 .................................... TCATTGGCCAGGGATTCGGCATGTACATTA 10089 36 100.0 30 .................................... CTGGACATTTGCATTGACGAAGAAGACGGC 10023 36 100.0 30 .................................... TGATAGTACAGGAATACCATGATGGGAAGT 9957 36 100.0 30 .................................... GATGAGAACATCGGTGTTCGTATCGAAGAC 9891 36 100.0 30 .................................... CATTTAAAGAAGCATTTGAAGCAATGAAAC 9825 36 100.0 30 .................................... GTACCAATCGTCCGTCACATCTCCCCTATA 9759 36 100.0 30 .................................... GTCGTACTCCTGTTCTGCTGTAGGGATATT 9693 36 97.2 30 ..............C..................... TATCTCCTACCCACAAATCTCCAACATCAT 9627 36 100.0 30 .................................... GGAAAGATTGCAGATGCGACCGGGAACAGC 9561 36 100.0 30 .................................... ACGATTCATACTTTGCTATTTGGTCTGTGT 9495 36 100.0 30 .................................... ACATGGCAAGTATGTTCCTTATAGTGATTT 9429 36 100.0 30 .................................... ATCAACAGAATGAAAATTGAAGAGCAGAAA 9363 36 94.4 0 .............A.................C.... | ========== ====== ====== ====== ==================================== ============================== ================== 16 36 99.5 30 GTTTGAGAGTCTTGTTAATACGGAAGGATTTTAAAC # Left flank : AAAAAGGATTCTATCTCAGCTTTATAAAAATCTTTCAGAAAAAATATTGGAAGATCATTTTGAAGAATTTGCGACTGTGAATCAGAAGGTTATCCAGTTTATGGATAAGGTTACGAGTTCTTCCGAATATAATCTGACATATGATGTTGATTTTCAGGCAGCAGGTCTGATAAAATATTGTAATGTACATATGGATTCCTGTTATGATAGTCTGACTGAAAAGTTTATAAACTATCTGAGAACCATGAAGCAGATCTGTAATGTTGATATTGTTTTTGTGTTGAATCTGAAGCAATATTTCAGTACCGAGGATCTGAGAGAAATCTATAAACACTGTTTTTATACGAAGATGTATCTTATTAATTTGGAAGGAGTAAAATCAGACCCCATCGAAAGTGACAGATATGTTATTATAGATAAAGATCTTTGTGTGCTGGACCTTGTGTATTAACAATCTTCTATCGTAAGAAGATAACGACTCGGCGAGAACCGGATTTGAG # Right flank : CACCAAAGAGTTCAGTAAAATCAAGCGTTCTCAGTTCTGCAAACGATAATTTAACAGAATATCGAAAAAGAGCAACAAACCCCGAAAATCCAGTATTTCCGGGGCTTTTCTTTGCGTATCATTTGATTTTATTCCTGTAATAATTGCTTTTCAAAGGTGGATAATAATTTGTTGATCGTAAAGAAATAACTCTTGCATTCGCTGCATGTTTTTGCATCGACTTCAATATCACCAAGAATGATGAGTTTGGCAGCCTGGAGTGCTGCAATAATGGTACGAAATTCGTCGGGTGTAATATCTGTGGCGTGATTAATCAATTTTTTCGCCGCAGAACAACAGAGTTGATAATTAATTTCTGCCTGGGCTTCTGATTCTGCAAGTCCAAGACGAGGCAGAACGGTAAGAGCGTAAGCGGTTGCTTCTATGTCAGAATGATTAAAGGCATAGGAAATATGGCTCATAGTAAAACCTCCTTAAGTTTTTAAGAAAATTATAACATA # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAGAGTCTTGTTAATACGGAAGGATTTTAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-3.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //