Array 1 136335-137227 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_FBPP01000033.1 Campylobacter coli isolate H090660740, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
    136335	    36	 100.0	    30	....................................	TTTAGCGTTTATATTAACATACGAATTTGT	
    136401	    36	 100.0	    29	....................................	TATGATATTTAACTATATCGCTCATTTGC 	
    136466	    36	 100.0	    30	....................................	TCATCTGACATTGAATATTGACTTTTAATT	
    136532	    36	 100.0	    30	....................................	TTTAGATTGGTTTTAATTATGGCTTCAAGT	
    136598	    36	 100.0	    30	....................................	AAAGACGCTCAAAATAACATTATACAAGGT	
    136664	    36	 100.0	    30	....................................	TTTATGAGTTTAAGCGGGGACACCCCGCAA	
    136730	    36	 100.0	    30	....................................	AGAATTTATAGGGCTCTAATCTTACTTCCA	
    136796	    36	 100.0	    30	....................................	TATTAACAAAGGCAAAGCTACAAAAACTCA	
    136862	    36	 100.0	    30	....................................	AGCTTCTTTAATCATGTCTTTTGTTTCTCT	
    136928	    36	 100.0	    30	....................................	TTTGAAATACCACTGCTATAATTTTTTTCT	
    136994	    36	 100.0	    30	....................................	CCAGGGTGTCCTGTATTCCAAGCTTTTAGC	
    137060	    36	 100.0	    30	....................................	AAAAGCACTCCAATCAATCAAAGGCACGAA	
    137126	    36	 100.0	    30	....................................	ATTTCAGATTGTGGTATATATTCTGTTTGC	
    137192	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
        14	    36	 100.0	    30	GTTTTAGTCTCTTTTTAAATTTCTTTATGGTAAAAT	                              	       

# Left flank :   TCCTAATATTTTTAAATAGAAATAAAATAATGTTAAAATATTTTGTTTCTATATTAAATCAAGGAGAAAAACAATGAAACATTTTATTTTTAGCGGATTAATTGGTTTAGGTGCTTTGGCTTTTTTAGCAGGTTGTGGCGATGAGGCAAAAACAAGCGATTATTATAAAGCGCACTTAGATGAGGCAAAAGCTAGAGTTGCAGAATGTAAAAAAATGGAGAAAATGAATGAAACTCAACAAAGGGATTGTTCTAATGCAAAATGGGCAGTTGAAATGCAAACCGACAATCGTGTTCCTTACGGAATTGGAAAAAATGAAAATTACAACAAAGACGCTCTTAAATGGAAATAAACTAGCGATTATTTTTTTAATTTTTCTTGCTCCAAATTTAGCTTTTGGGGTTAAAAGTGCGGAAGGCGTTTTAAGCATAATACGCAATGGGCTTTTATCTTGAACGCCCCTTATTAAAACCGCTTGTTTGTAGATATTTTGAATTTTT
# Right flank :  TGGACTTTGAACAAATAAAGAAAAATAGAGCTTTTTGTATACAAAAATGTATAAAAATATGCTATCATTTTAAAAGAGAAATTTAAAAAGAGACTAAAATAAGTGGTTTTCGGTTAGCCACGCAGGGTTACAATCCCTTTAAAACCGTTAAAATTCAAACAAACTAGCTTGTCTAATTTTATTAGACTTAGTTTTGTTTTCTTTGTATATCTTGTCATTGCTGTATTTAAAATCTTGTGTTTTTTCATCATACTCAAAAAGAACTAAATTTTTATCATCATTCATTTTTTCATTAAAAGAAACTCCGCCTAAAAGTATTTGCATATTGTCAAATTGTTTTTCAGTTATGGTTAATACTCTTATATTGCCACAAGGGGGTAAAATTCTTTCTACGGATTTGATTGCTGTTTTAGCCGAAGTCATTCCTTTACAAATTTTAACATATACGCTAAATTGCATCATAAAAAAGCCAAGTTTTACAAGCGAAACTCTAAATTTAT

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGTCTCTTTTTAAATTTCTTTATGGTAAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:80.56%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT with 98% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: R [66.7-78.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.5,0.27   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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