Array 1 200634-201197 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JADNNL010000003.1 Pediococcus acidilactici strain 1001311H_170123_E5 NODE_3_length_403817_cov_94.5466, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
    200634	    36	 100.0	    30	....................................	CTTTCCTCAATAAATAATCTACAGAAACGT	
    200700	    36	 100.0	    30	....................................	GTTTGAAGAAAAGGAAGGTAAATAATTATG	
    200766	    36	 100.0	    30	....................................	CTGAACAACGGTCTGAACAACGAACTGAAC	
    200832	    36	 100.0	    30	....................................	CGATCTGTCGGTTAAACATGTAATTCTCGA	
    200898	    36	 100.0	    30	....................................	TCCTTGCGTTTCGATTTTCGCAACGTTTTT	
    200964	    36	 100.0	    30	....................................	CAAACATGTAAGTGCGCTTTTATCTAACTC	
    201030	    36	 100.0	    30	....................................	GACGTTCAAGAAACAAGCCGATAAGCAAGG	
    201096	    36	  91.7	    30	.............A..................A..T	TTTCTTCTCTGCTGGTTTTCTGCTAATTTC	
    201162	    36	  97.2	     0	............C.......................	|                             	
==========	======	======	======	====================================	==============================	==================
         9	    36	  98.8	    30	GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC	                              	       

# Left flank :   CCAAGATTTAGTTATTCAAAAATATTTAACTAAGATTGAACGAGTTTTTGCTGAAGGGCTGGTGGATGAGCAGCGTAACCAAATTCACGATCAAGTTAACCAGCTATTTAATACGGTTGCTGAACAATTATTTATGCTAGATTTACCGATTAGCGTCAATTATGATTTTGATTTGAAAAAGTTATTGAAGTATTGTGGAGTGCACTTTGATCCGCTAAGCGTGGGTAACCCGTATGGTATAATTGAAGCGATTTTGAAGATTCACGAGGAGTGCGCGATTAATTCGTGTGTCGTGTTAACTAATGTTGCACATTATTTAACGGCAACCCAAATTGAAGAACTTACCCAGCTAGTAAGTCAAACGAATCAAGCACTCTTACTAATTGAATTCACAGAAATAGGCAATCAGGAGGCCTATGGAAATAGCGAATTCTACTACATTGACAATGACTTTGTTGATTGGCATCGATAATTGATGAAATTTTAGTTAGAAAATAACG
# Right flank :  CTGACTGAAATTAATAAGAGTTAACGTTTTAAGGAAGTTATCAATAGTATTAGAAGTGTACTTTGAAGAATGGAATTTTGATGAAACTACTAGTTACGGAGAATGATAAACTACTAAGGTCCAAATGAATTTATAGGTTTAGCATCATTACTTGAAGACGATGTTTTAGTGGTGGTTGGAAATAAAATCCGCCCGAAACGATCGGGTGGTTTTCAGTTTGTAAAAGTATACCAATATATTGATATAGTAAATGCATAAAGTTAAGAAAGTGATAAAAATTGGATGATGAAGAATAAAAAAGGTATCGCAATAAGCAAATGACAATAGTGACACTAATCATTCAGACGATTACAGCTATTGTACAACTCATCACAATGCTTAAAAAATAGGTAAGAGAGGCGATACGCCTTTCTTCTGTTCATCAATTTTAAAATGGAGGCATTAAAATGAAAAACATAGGAAAGCTACAATATTTAACTTTGACTATCAGTATCGTTGCT

# Questionable array : NO	 Score: 6.20
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:69.44%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-1.10,0.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-4] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [71.7-73.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.78,0   Confidence: HIGH] 

# Array family : NA
//