Array 1 200634-201197 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADNNL010000003.1 Pediococcus acidilactici strain 1001311H_170123_E5 NODE_3_length_403817_cov_94.5466, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 200634 36 100.0 30 .................................... CTTTCCTCAATAAATAATCTACAGAAACGT 200700 36 100.0 30 .................................... GTTTGAAGAAAAGGAAGGTAAATAATTATG 200766 36 100.0 30 .................................... CTGAACAACGGTCTGAACAACGAACTGAAC 200832 36 100.0 30 .................................... CGATCTGTCGGTTAAACATGTAATTCTCGA 200898 36 100.0 30 .................................... TCCTTGCGTTTCGATTTTCGCAACGTTTTT 200964 36 100.0 30 .................................... CAAACATGTAAGTGCGCTTTTATCTAACTC 201030 36 100.0 30 .................................... GACGTTCAAGAAACAAGCCGATAAGCAAGG 201096 36 91.7 30 .............A..................A..T TTTCTTCTCTGCTGGTTTTCTGCTAATTTC 201162 36 97.2 0 ............C....................... | ========== ====== ====== ====== ==================================== ============================== ================== 9 36 98.8 30 GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC # Left flank : CCAAGATTTAGTTATTCAAAAATATTTAACTAAGATTGAACGAGTTTTTGCTGAAGGGCTGGTGGATGAGCAGCGTAACCAAATTCACGATCAAGTTAACCAGCTATTTAATACGGTTGCTGAACAATTATTTATGCTAGATTTACCGATTAGCGTCAATTATGATTTTGATTTGAAAAAGTTATTGAAGTATTGTGGAGTGCACTTTGATCCGCTAAGCGTGGGTAACCCGTATGGTATAATTGAAGCGATTTTGAAGATTCACGAGGAGTGCGCGATTAATTCGTGTGTCGTGTTAACTAATGTTGCACATTATTTAACGGCAACCCAAATTGAAGAACTTACCCAGCTAGTAAGTCAAACGAATCAAGCACTCTTACTAATTGAATTCACAGAAATAGGCAATCAGGAGGCCTATGGAAATAGCGAATTCTACTACATTGACAATGACTTTGTTGATTGGCATCGATAATTGATGAAATTTTAGTTAGAAAATAACG # Right flank : CTGACTGAAATTAATAAGAGTTAACGTTTTAAGGAAGTTATCAATAGTATTAGAAGTGTACTTTGAAGAATGGAATTTTGATGAAACTACTAGTTACGGAGAATGATAAACTACTAAGGTCCAAATGAATTTATAGGTTTAGCATCATTACTTGAAGACGATGTTTTAGTGGTGGTTGGAAATAAAATCCGCCCGAAACGATCGGGTGGTTTTCAGTTTGTAAAAGTATACCAATATATTGATATAGTAAATGCATAAAGTTAAGAAAGTGATAAAAATTGGATGATGAAGAATAAAAAAGGTATCGCAATAAGCAAATGACAATAGTGACACTAATCATTCAGACGATTACAGCTATTGTACAACTCATCACAATGCTTAAAAAATAGGTAAGAGAGGCGATACGCCTTTCTTCTGTTCATCAATTTTAAAATGGAGGCATTAAAATGAAAAACATAGGAAAGCTACAATATTTAACTTTGACTATCAGTATCGTTGCT # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.10,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //