Array 1 4135-3553 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJUR01000084.1 Paracoccus denitrificans strain NBRC 102528 sequence084, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ========================================================================================================================================================================================= ================== 4134 32 100.0 34 ................................ TCGTGTCACCATCGGGCGCGATCCGCGCGCCCCA 4068 32 100.0 35 ................................ CTATTCCGGGGCGTCGTCGATCCGAGCGACGGTCG 4001 32 100.0 34 ................................ AGCACTCCTGCCCCAGCCAGCGCGATTGCTGCCT 3935 32 100.0 34 ................................ CTGTATCCCGATGGCGGCGCGGGGTTCGTCCTAT 3869 32 100.0 34 ................................ ATCTCGAACCGGCGAACATCGGGCATATCCAAGC 3803 32 100.0 185 ................................ ACCGGCAAGAACGTCACCTCCGAGCCTTGCAGTTCAAAAGGGGGGCGCGGACGGCTGATCGGACGCACGAAGGGCGGGCTGAACTCGAAGCTGCAGGTGGTGGCGGACGCGAAGGGTCGTCCGATCCGGATGTTCCTGTCGGCGGGGCAGACCTCCGACTACATTGGCGCGCGGGCGCTGCTGTC 3586 32 75.0 0 C...AT........C.......T.C.T.C... | G,G [3555,3573] ========== ====== ====== ====== ================================ ========================================================================================================================================================================================= ================== 7 32 96.4 60 GTCGCCCCCTTCGCGGGGGCGTGGATCGAAAC # Left flank : CCCCCTTCGCGGGGGCGTGGATCGAAACTGAAATCCTATGAAATGATGGTGCGCCGTCATGT # Right flank : CGGGGTTATGATGCCGACTAGTTCCGCAACGCGCTGATCGAGATGGGGATTTCACCGTGTATCCCGTCCCGCATCGGTCGCAAAGCCTCGGTTCCGCACGACACCGAACTCTACCGCCTGAGCCACAGGATTGAGAACATGTTCGCACGCCTCAAGGACTGGCGCCGTATTGCAACCCGCTAAGACTGATGCCCCATTCTGTTCCTCTCCGCCTGCGCCCTGGCTGCGACCATCATATATTGGTTGTGAGCCCTGACTCTAAGCGATCAATTTTCAGGAGACCTTTTGGGTTTGGTGGATAACCATTCAGAATAGAGAGTGCGCTCGTCGCTTGTTAGCGTCGCCTCGATCTGGCAGCGCAGTTCTGAGTACCGGCGGTACTCTGCCATATCCTGAAACCTAGGAACCACATACATTGCTGGGCAGGGGAAGGGCGCAAAGCCATAATATTCTGGATCGTTGTCGCGGGCCCATTCCCATCCCGCGTCCTTGTAAAAGTC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCTTCGCGGGGGCGTGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCCCCCTTCGCGGGGGCGTGGATCGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-7.20,-7.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [36.7-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.5 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //