Array 1 41468-43378 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADQVW010000015.1 Corynebacterium diphtheriae bv. mitis strain 07-16 NODE_15_length_59914_cov_41.594711, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 41468 28 67.9 26 TCA..CA............A.....TCA CGGCGGTCCAGTTCTCAAAGTCCCTG Deletion [41522] 41522 27 82.1 33 ..........C...GAC..-........ CAATACATGAGGATTGACAGTGCTGATTATGAC 41582 28 96.4 33 ..........C................. ATACTGGGTGTGTCTCGTGGATCCGTTAACAAC 41643 28 96.4 33 ..........C................. AAGGGTAGCGTGCAGTCACGACAAAACCAAGGC 41704 28 96.4 33 ..........C................. GCTGGGGGAGATCAAAACCGCAGGGACGAACGG 41765 28 96.4 33 ..........C................. CATGATGCCTAGCAACCGATCTTGATTAGTCTG 41826 28 96.4 33 ..........C................. CAGCACAGATTCTTTCGCCGTTTTGGTCGGTGG 41887 28 100.0 33 ............................ TAGCCATCATTCTCTCCTAGGGCCTCTGAAAGG 41948 28 100.0 33 ............................ GCGCCGCTGTCGTCAAGGTCGGCGATGAGGGTG 42009 28 100.0 33 ............................ GGCCTGTGATCACGTAGAGCATTCCCCACCTCC 42070 28 100.0 33 ............................ ATTGCAATTAGCTCACCGCGGCGTGGCTTGCGG 42131 28 100.0 33 ............................ GCGAAACTGCCGGGAACGCTCGGAGCAAACCTG 42192 28 100.0 33 ............................ GACCGCTATAACGACCTCATGGCAGACCGGTAC 42253 28 100.0 33 ............................ AGAGTGAGATCCTAGGGCTTGAAGACGATCTCG 42314 28 100.0 33 ............................ GACAGCGCGGGCGGCTTCACGGGCCTGTTTGCG 42375 28 100.0 33 ............................ GTCTGGATCGGTGAGCGCATCGGGCTTGGTCAG 42436 28 100.0 33 ............................ GTCTGGATCGGTGAGCGCATCGGGCTTGGTCAG 42497 28 100.0 33 ............................ GCTGATATGGCCAGCAAATCCGAAGTGCAGCAG 42558 28 100.0 33 ............................ TTCGCTGATGAGCTTGGTGGCTTTCTGCCATGC 42619 28 100.0 33 ............................ GTGTTGGGCGAAGAGGATGGTTTTTTGGGTTAG 42680 28 100.0 33 ............................ CTGAATCCACCGTGAAGCGCGCCGTAAAAGAGC 42741 28 100.0 33 ............................ TTGCTGCTGCTGTTTTAGAGGCGGACGGCACGG 42802 28 100.0 33 ............................ GCCCAGGTGAGGGGCCAGAGGCGTGGAAATTTG 42863 28 100.0 33 ............................ TGATTCTCCCTCGTTGTTGTGCACCCCAACCCA 42924 28 100.0 33 ............................ AACGTCTTGAACCTGGAATGCGAACGTTCCGCG 42985 28 100.0 33 ............................ CCGATAAAGGCTTCCAGTTGGCGTTCCATAGGG 43046 28 100.0 33 ............................ GGCGGTGACCCTTGGGGCGACATTGTCGAGGCG 43107 28 96.4 33 ......................T..... ACAGATGATGCGTAATGAGCGTGTCGGTGGTGG 43168 28 100.0 33 ............................ GTCACATCGTTAATAGTATTAATAACAGTTCAG 43229 28 100.0 33 ............................ CAGGCGGTCTACGGCTTGCAGGAACTCCATAGG 43290 28 100.0 33 ............................ TTTTGGTACTCGCGTAGTCGCTGGGGTTTAGGC 43351 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 32 28 97.8 33 GGCTCATCCCTGCTAGTGCGGGGAAAAC # Left flank : TACATCAAAAAGCTCGAAGCGATCAGCGTAACGATCCAAATAGTCTAGGACGACCTGATCTTTCCCTTTTCGAGCAAGACGACGTCTCATCTTGTTGAACCATTCAAGAAAATCAAAAGGTTCCACGTCCATGTCGATATCCATGGAATGGGCACGCCAGAAAATAGCCAGCAAAAGCCGCATCACAGCATAGTCTTGAGCCGGGGACTCCCCCTGAATATAGGCAACCTGCACCTCCCCCGCGAAAATATCTCGTATTCCAACTGAAATCTGGTTACCTTGAGTATCAAGAGCCAGAATCCAGCGGATCTCCAGTAACGAAGCCATCACCAACTCCTTCCTGATTGTTTTAAAACTCCCAACTTAGGAAGCACTTTTCCACAGAATACACTCTATAGATATTAAAAGTTAGTTTTTTCAAAATTTTTTAGTAGAGCCATCATTTACTGATTTCTCTGAATGAAAAACACAGATTCCAAAACCCGTTCTTCAACAAAGAT # Right flank : CACTTATCAAGCTGCACGTTTAGAGCCAGTTAGAGCTTATTACATATAACTTTGTTTCAGCAATTTTTCTGCTTCATCTTTATTTCTACTCTTTTAGGATCAGCCATTCACCCAAATTTGCTTAGTCCTTTCTTCTAGCCATAGGCTGGCATTGTTCCCTGCGATCAGGGATGAGCCTTTTTAATATCTCTACAAGATTTACATAGGCATACTTCCCCGCACCAGCGGGGTTTCCTTTTATGCGTCTTCCTTTGGGCAGACTTCCACCTCTAATCCACGTTCATTGGTATAACGCACTAGGAATCGACCTACACGAGCCTCTCCTCTTTCGTTGAAAAGCAACGCAACTTGGCCTTTAATCAAACCGGATCGTTGCCATTCTGGTGGTGTTTGTGCTTCGAGCGAATCAATAACGGCATTAAAATCCGAATCTCTACGTGTCATTCGGGTTGGCAGGCGCACTGTGTTTCCAGCCAATGCCTCAGTTTCTTTCCAAGTAA # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTCATCCCTGCTAGTGCGGGGAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.50,-6.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0.41 Confidence: LOW] # Array family : NA //