Array 1 44287-45894 **** Predicted by CRISPRDetect 2.4 *** >NZ_VSTR01000003.1 Ligilactobacillus salivarius strain FZJTZ9M6.scaf Scaffold3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================================================================== ================== 44287 36 100.0 30 .................................... CTTGAATTTGTTGCGTCCCGGCAATCGCCC 44353 36 100.0 30 .................................... CATTGATCTTAATATTAGGGGAGTGAATGT 44419 36 100.0 30 .................................... TTGCAATTGCCTAAGATCATCGGCGCTCAA 44485 36 100.0 30 .................................... CGTTGTTCCCATGTAAACTTTGTTCTTCCT 44551 36 100.0 30 .................................... ATAGATAGCTTGAATTTCCTCATACAGGTA 44617 36 100.0 31 .................................... TCAACTACAATTAACGATGGCTTATATTATG 44684 36 100.0 30 .................................... CATCGAAAAGTCATAACTACCTTGACGATA 44750 36 100.0 30 .................................... TATAGAAGCGTTACAGTATAAGAACATGGA 44816 36 100.0 30 .................................... AAACTTGACAAATCAAAGTACACTATATTG 44882 36 100.0 31 .................................... AACTCACGTTCTAACCAGCCTTGACTGACAA 44949 36 100.0 30 .................................... TTAACCCAAAAGAAAGCAGCTGAACTATTA 45015 36 100.0 30 .................................... TTAACCCAAAAGAAAGCAGCTGAACTATTA 45081 36 100.0 30 .................................... CGAAACGGAAGTTGTTAAGCATTCAACAGA 45147 36 100.0 30 .................................... CATTAATTTTATCCTTGGCCCAACTCACAC 45213 36 100.0 30 .................................... TGACAAAATAAATGTATTCAGCTAGTATTT 45279 36 100.0 30 .................................... AATGTAATCGATAATTGCAACATACTTATC 45345 36 100.0 30 .................................... ATAGTGTCTAAGTCTTGAAACTGAGCAACC 45411 36 100.0 30 .................................... TATCACAGAAAGTTCTCCAGCAACATTATT 45477 36 100.0 30 .................................... TTGCTGTCTTACACCTATGTCAATTCAACT 45543 36 100.0 30 .................................... AAGTTCACACGAAAAGCCCTATGACAATAC 45609 36 86.1 29 ..........T.........T...A......G.T.. ATCTGCGTTCAGTTGGTGTCTCAATGCTC C [45642] 45675 36 94.4 82 ........................A..A........ ACAACTGGAGTTTGAGTACGTTTAGCTTGTGTTTCAGAAGTATGTTAAAAACCTATTATATGTTATAATATGAAAGTGTTTA 45793 36 83.3 30 .....G....T.........T.........G.T..T AGTAATTCACCGCTAGTTAAGTGGTTTTTT 45859 36 80.6 0 ..........A.........T...AG...CG..G.. | ========== ====== ====== ====== ==================================== ================================================================================== ================== 24 36 97.7 32 GTTTCAGAAGGATGTTAAATCAATTAGGTTAAGACC # Left flank : AACAGACCGAATTAGTAAAAAGTATATGAATGTATTAATTAAGAAGATTATTGAAGACATCACAGACGATGAAAGACAAGCAATACTAAAATCAGTAAATAGTTTGTATGATCGTATTCGAGAGGTTTTGTATAAAATTGATATACCATTACAAGTAGATTATGACAATGATTTAACAAGACTATTTAAGTATTGTCAGGTACATACAGAGGCATTGCTATGGAAAAATGCGTATGATAGAATATCTTCAGATGTTAAATTGCATGTGGAACTAAATAGAGAAAGAATTATAGGTCTAACCAATGTCGCACATTATCTCACTAAAGAAGAGTTTCAGGAACTTGTAGGTCTTGTTAAGGCGACTAACTCATCAATGTTTATAATTGAATTCACAGAAAAGAATGGTCAGAGATTCTTTGAAAGCTGTGATAATTACTACATTGATGAGGATTATATTGATTGGTACTAACGAATCGTTAAATTTTGATTATAAAGTAACG # Right flank : CTAAAATACAAAAAATATTTCATAATATTTATAAATCTATCAGAAATTTTCTGGTAGATTTTTTTAGTGTAAAAATTTTTGAGTTTAAGATATATTATGGTTGATAATGTAATATTATATGATATATAATATAGTTGAAGATGAGATATAAAAGAAAGTGAGGGATGATGATGAAAATTCAAGTTAGTTCTGATTTACTAGATGGTTTAGTATTAGCGCTTTTAGATAAGCAAGATTATTATGGATACTCATTGACACAGGATATGCAAAGAGCAATTTCAATTTCAGAATCAACACTCTACCCAGTATTACGAAGGTTAAAGAATAATGGTTTATTAGAAACATATGATCAATCATATCAAGGGAGAAATCGTAGATATTATCGCATAACAAATAGTGGGGAAGAACATTTAGGAAGAGTTAAAAAAATGTGGAGCGACTACAAAGTTAGTTTAGATTCAATTTTCGAAAAAAACTAGGGAGGGGGAATAATAATGAAC # Questionable array : NO Score: 6.00 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:-0.14, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGGATGTTAAATCAATTAGGTTAAGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.70,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-21] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [73.3-85.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //