Array 1 38-493 **** Predicted by CRISPRDetect 2.4 *** >NZ_NRNR01000051.1 Cronobacter dublinensis strain cro3213W contig51, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 38 29 100.0 32 ............................. TCATAAACAGACTGCATATAACGCGGGTAATC 99 29 100.0 32 ............................. GCGCGCTGCGTGGCGTCAGCCAGTTCAAGCAT 160 29 100.0 32 ............................. GTTTGTGGTCGTTGTAAAGGCACAGGCCTGCG 221 29 100.0 32 ............................. GTCGCGGAAACCTACCTCAACGGGCGCGGCAC 282 29 100.0 32 ............................. GTGATAACCAGCTCTTTGTCTTCCAGTTGCCA 343 29 96.6 32 .............T............... AAACTGGTTGGAGATAGCTTCATTGGCTACAA 404 29 100.0 32 ............................. GCATTCCAAAAACCTTTCATTAACATATTCAT 465 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 8 29 99.6 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AAACCGGATTTACGAACGGCAACCCCCAGGGCGGTGAG # Right flank : GAACCCGTTTGCCGTGGCGCAAAAAACTCATCTCTGTCATTCGTGCCAGCCCGAATATCCAGCTCAACCACCCGACAAAGCAAACATTCGCAACCCCTCCCAAACCCCATATTCTTCAGCGGCGTTTATACTTCAAAGCCAACATGAAATTTCGCAACACTGCGCAACGAAGGAGAGGCTATGCGGGTACACCATCTTAACTGCGGTTGTATGTGTCCTTTGGGCGGCGCGCTGTATGACGGCTTCAGCAAAGGGTTGCACGCGCATCTGATTTGCCATTGTCTGCTGATTGAAACCCAAAATCACGGACTCGTGCTGGTGGATACCGGCTTCGGCTGCGACGATATGCGCCATCCTGGCCGTCGTTTGCCCCTCTTTTTCCGGGCGCTGAATAACATTCAGTACCGCGAATCATTAACGGCGCTGCATCATATTAAGGCGCTCGGTTTTAAGCCGGAGGATGTACGGCACATTGTGCTGACGCATCTGGATTTCGATCA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [25.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0.27 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 26535-26746 **** Predicted by CRISPRDetect 2.4 *** >NZ_NRNR01000051.1 Cronobacter dublinensis strain cro3213W contig51, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 26535 29 100.0 32 ............................. CCAGAAATTCGGCTCGCTGCCCAGCAAATACC 26596 29 100.0 32 ............................. AGAACGGCGACGGGGGAGGCGTAACTGACCCG 26657 29 100.0 32 ............................. AACGCCGCCGGTGCGTTCGCGCGCTGCGCCAC 26718 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 4 29 100.0 32 GTGTTCCCCGCGCGAGCGGGGATAAACCG # Left flank : GAGGTGCTGGCGGCGGGCGACATCGAACCACCGCAACCCGCGGCGGATATGCTGCCGCCCGCTATTCCACTGGCGGATTCGCTGGCCGAAGCGGGCTTCAGGAGCCGCTAATGAGCATGCTGATGGTTGTCACCGAAAACGTGCCGCCGAGACTGCGCGGGCGGCTCGCTATCTGGCTGCTTGAACTGCGCGCCGGGGTTTATGTCGGTGACGTCTCGAAGCGGGTGCGTGAAATGATCTGGCATCAGATAACCGAACTCGCGGAAGAGGGCAATGTCGTGATGGCCTGGGCTACGAATAATGAATCCGGCTTCGATTTCCAGACGTATGGCGTTAACCGACGTATTCCGGTGGATTTAGACGGCCTGCGCCTTGTCTCATTTTTACCCCTTCAGAATCAGTAGGTTAACTGCTCTTTAAGAATATGGAGATGTAATAAAAAGGTTGGTAGATTGTTGGGTGTGAAAAATTTCCTTATAGAACAGTTGCATAGTTTTAGA # Right flank : GGCCATGCATGCATTTATGATGGGCAAATTTGGATAAGCGATTTTCGACAAAAATCGCTCTACCCCGGAGAGAGTTATCGAAAAGCACAACCAGCTTTTAAACTATACAGGCACTACTGAGATGAATAAGAAAAACCTTTTACTGGCTATTCCAGCGTTATATTGTTTTTGCGTGTTTGCCGGGGATGACACTCCCGGGCAACAGCCGCAACAGGCCGCGCTCAAATTCAACCAGTGGTATATAAAACACTTCAACGATTCGGATGATAATCTGCTTAACAGTAAAGAAATCGAAATCTACGTGGCGAAAGAGACGCTGGAAACGTTACGACACGCGAGAAATAACGACGATGAATTTTATGATGCCGACTTTTTTATAAAAGCGCAGGACATCATGCCTGACTGGCCAACCCATACGGTTGTAACCGGCGCAGAATACGATCCCGTTTGTACTCAGGTGTACGTCTCATTCGGCCAGCATCAGACGCATGGCGTGGTTG # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCGAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCGAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 43661-43933 **** Predicted by CRISPRDetect 2.4 *** >NZ_NRNR01000017.1 Cronobacter dublinensis strain cro3213W contig17, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 43661 29 100.0 32 ............................. AATTGCGTCAAACGCATTCATTCTCGTTATTG 43722 29 100.0 32 ............................. TTTGCAGACTCGTTAATATAGCTGTCGGTTTT 43783 29 100.0 32 ............................. CGACACATAGTAACACATTCACATATTAAATC 43844 29 100.0 32 ............................. TTGGCAGCTCAATCCGTATGATTTCGACGGCT 43905 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 5 29 100.0 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : ACGAAAGCTTTAAATGGATGATGGCGCACAACATCGCCTTTATTGTCGTCAATATCAACATCAATTATCGCCGTCCTGCGGTGCTTGGCGACGTGCTGACCATCACCAGCGAGATGAAACAGCTCAATGGTAAAAGCGGAGTGCTGAGCCAGGTGATTACGCTGGGGCCCGAAGACGAGGTAGTCGCCGACGCGCTCATCACGTTCGTGTGTGTCGATCTTAAAACCCAGAAAGCGCTGCCGATTGAAGGCGAACTGCGCGAAAAACTGGAAAATATCACAGGGTAAATTCTGCAATCACGCTGCCTGTGCGTGTCGTCATGGACTTCCACTTACCGAAAGCGAACAATCCGGTAGATGTTACCGGCCCGAAAGCACGCTGAAAAAAGGTTTTTAAAATCAACAGGGCAGCCGCTCTTTAACAAGATGGGTTGTGAAGTAAATGTTGGTAGAATGTTGGGGTCGATAAAAGTTTAAAGAAAACAACAGGTTGTTTTTAGA # Right flank : GCAATAACCACCTCAACTATGACGGTCTGCTGGATTATGTGGACGACATCTGCCGCAACGTCTTTAACCACTATGACATCGTGACGGTGGGCGAGATGAACGGGCTGGATGCGCACCATGCGGAAGAGTGGGTGGGCGAGAATCGCGGGCGGCTTAATATGGTGTTTCAGTTCGAGCATGTCAGGCTCTGGGAGCCGCAGGCGGGCCTGCGCCCGACGCCAGCCGTGTTGCGTAACATCTTCACCGGCTGGCAGCAGGCGCTGGAAGGTAAGGGCTGGAATGCGCTGTATGTGGAAAACCACGACGTGACGCGGGTGGTCTCGCGCTGGGGCGATACCGAACGCCACTGGCGCGAGAGCGCGACCTGCATCGCGGCGATGTATTTTCTGATGCAGGGCACGCCGTTTATCTATCAGGGCCAGGAGATTGGGATGACCAATACGCGGTTTGCGAGCCTTGATGACTTCGACGATGTCTCCGCGCACAACAAAGCGCGCGAC # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //