Array 1 10620-10871 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV832751.1 Staphylococcus sp. HMSC069E09 Scaffold330, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 10620 37 100.0 34 ..................................... TGGAGATATTTAAACTAATAGTGTAAAAGTGCAC 10691 37 100.0 34 ..................................... AACAAAACAAAAACTATATAAAAGGATATGATGA 10762 37 100.0 36 ..................................... TAATGACACTTATGAATTGGTTAATAGAAATACAGA 10835 37 86.5 0 ................................NNNNN | ========== ====== ====== ====== ===================================== ==================================== ================== 4 37 96.6 35 AGTTCTCGTCCCCTTTTATACGGGGTATTCTCTGATT # Left flank : AACTAAATTTATTATTAAATCCAGTACTTCCTCCATAATTTCAACATCTCCCAATTTTTTATATAACTATCAACACTTTTCATTAATTCTTGTTAAAATCAACAGAACCTTTTTTAAGATTGTCAAAATCATTTAAATTTTTTAAATAATAAAACAAACTGCGCTGACTCAAATGCAGAGTTAGCGCTTTGGTTATTATCTAGTTTTTTAAAAACCTTAATATTAACATCTTTTTGTCCCCTTTTATACGGGGTATTCTCTGATTAATGAGACAACAAATACAAAACTTATTGAATAGCGAGTTCTCGTCCCCTTTTATACGGGGTATTCTCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGTCCCCTTTTATACGGGGTATTCTCTGATTTAGAAGACCCAGTCGACAGTGTAGAAGATTTACC # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGTCCCCTTTTATACGGGGTATTCTCTGATTTAAGCGCTTAAAACACAAATAAGAGCTGATATAGGTGTTCTCGTCCCCTTTTATACGGGGTATTCTCTGATTAATATATTGATTTGTTAAATATACTTAGAGTGAATGGTTCTCGTCCCCTTTTATACGGGGTATTCTCTGATTGGTCACTACTTTTTCGAGGGAGATAATTAACAATGGTGTTCTCGTCCCCTTTTATACGGGGTATTCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCGTCCCCTTTTATACGGGGTATTCTCTGATTAGCAATTAATTTCAATCCAGTATTGCCT # Questionable array : NO Score: 5.69 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGTTCTCGTCCCCTTTTATACGGGGTATTCTCTGATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.50,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0.37 Confidence: LOW] # Array family : NA // Array 2 11215-10960 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV832751.1 Staphylococcus sp. HMSC069E09 Scaffold330, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================================== =================================== ================== 11214 38 86.8 35 NNNNN................................. CATTGTTAATTATCTCCCTCGAAAAAGTAGTGACC 11141 38 94.7 34 ....................................CA TTCACTCTAAGTATATTTAACAAATCAATATATT 11069 38 100.0 34 ...................................... CTATATCAGCTCTTATTTGTGTTTTAAGCGCTTA 10997 38 81.6 0 ...............................NNNNNNN | ========== ====== ====== ====== ====================================== =================================== ================== 4 38 90.8 35 AATCAGAGAATACCCCGTATAAAAGGGGACGAGAACAC # Left flank : TTTCATATGGAAAAGGTTAAAATTCCATCTTTTAAGGGAGAAATTGTATTTAAAATAAATGGGCCATTGCCGTTTTTACAATTAGTTTACTTTTTATTAGCTTTTGGAGAATTTTCAGGTACGGGTATAAAGACTAGTCTAGGTATGGGGAAATACAATATAGTTGATAAAAATCAAGATAACTAAAAAGTAGTTACACTTCATAGTCCATTTAAAACAAATCGAATTTATAGTATAATATATATAGGGAAATAACCTTTAAGTGTCAAATTTTTTGACAAATAAGGTATTACCTAGAGTTAGATTGTCAAAATTTTTGCCAATTTAAATTATCCTTCAAACTTAGGCAATACTGGATTGAAATTAATTGCTAATCAGAGAATACCCCGTATAAAAGGGGACGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGAATACCCCGTATAAAAGGGGACGAGAACTTCTGTATTTCTATTAACCAATTCATAAGTGTCATTAAATCAGAGAATACCCCGTATAAAAGGGGACGAGAACTTCATCATATCCTTTTATATAGTTTTTGTTTTGTTAATCAGAGAATACCCCGTATAAAAGGGGACGAGAACTGTGCACTTTTACACTATTAGTTTAAATATCTCCAAATCAGAGAATACCCCGTATAAAAGGGGACGAGAACTGGTAAATCTTCTACACTGTCGACTGGGTCTTCTAAATCAGAGAATACCCCGTATAAAAGGGGACGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 5.40 # Score Detail : 1:0, 2:3, 3:0, 4:0.54, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AATCAGAGAATACCCCGTATAAAAGGGGACGAGAACAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.26%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.50,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [7-7] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA //