Array 1 29342-29575 **** Predicted by CRISPRDetect 2.4 *** >NZ_JXLB01000004.1 Enterococcus ratti strain DSM 15687 Scaffold4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 29342 36 100.0 30 .................................... ATAGCAAATGATAGGAGATGTTAAAAGTGT 29408 36 100.0 30 .................................... AGATTCTACGCTTTTTATTGAACAGGAAAA 29474 36 100.0 30 .................................... GATTAAACGTTTGATATACGTTCGCTATGT 29540 36 86.1 0 .........T......A....T...A........T. | ========== ====== ====== ====== ==================================== ============================== ================== 4 36 96.5 30 GTTTTAGAGCTATGTTGTTTTGAATGCTTCCAAAAC # Left flank : AGAAGTAAAGTCAATGATTGATAAATTGACCGCTACGATCAGTGAATTGATCGGCTATGAGCTGTTGGATCATGAATTAGATTTGGAGAGTGATGAGATTACTATTTTAGAATTATTCAAAGCGTTAGGAGTGAAAATTGAGACACGAAGTGATACTCTCTTTGAGAAGTTGCTGGAGATTTTACAAATTTATAAATATCTCTCAAAAAAGAAATTATTAGTGTTTATTAATGTTTGCGCCTACCTAAAGTTAGAAGAACTATCTGAAATACAAAATTACATTTCTTTATATAATATGGATGTTCTATTTTTAGAGCCTCGTAAGATTCAAGGAATAACACAAACAATTTTAGATAAAGACTATTTTTTAGTCTAATAATTATGGTAAAATATATTTAAAAACAACTAGTAGAAGTAATTATTACTAAGCATTCAAGACGAAAGTTTTGCTATGGACGAATAGCGTGAAGCTAAAATAGCGCAGAAAAATTTTCTGCGAG # Right flank : CTTGAAAAATGTAGTTTCCCAGTGTATGATTGATTTGTAGCTATATTATTTTGAATGAGGAGGTTCTGTTATGATTGAATTGTTTTAGAGCAATGAAAAATAGAGAGTGTATGGAGAACAATAGTTAGTGAAAAGCTGACTATTGTTCTTTTTTGATTTAAAATGTCTTAAATTATGTATGCGTTCAAAAGTCAAGAATCATGCCAAAAAGACAAATCTAATAAATAGAGTAGGAAAAGCTTTTGCCTATTTTTAATTATGAGAAAAGCTGTTTTCTTATAAAAAACCTTTTTTTCCATTCCCATTTTTTTCATATCGTTGGACGATTGCATAGACTGCTAGTACCATAAAATGAAAGAGGAGGTAAATTACATGTTTGATTCAAAGCTTGTTTTTTATTCAGAATGGTTTATTGCTATTTTAAACATTGCTTCAATCATCATTTTAATGATAGGCGCTAGTTTAGTTTTAAAAAATTTTTTTGATTGGACACGACTAAA # Questionable array : NO Score: 5.68 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGTTGTTTTGAATGCTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTATGTTGTTTTGAATGCTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.20,-0.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //