Array 1 315340-315051 **** Predicted by CRISPRDetect 2.4 *** >NZ_LBFH01000025.1 Clostridium botulinum strain Walls 8G contig_91, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 315339 29 100.0 37 ............................. TCTTGAGTAAAAAATAAAACCTCATGTCCTTCTAGGG 315273 29 96.6 36 C............................ GATACCTGTTGTGTAAGTTTAGCTATCTCTGGATTG 315208 29 93.1 36 .......A........T............ ATATATGCACTACGGTGTTTTACATTATTCGGACTA 315143 29 89.7 35 ..............AG............C AAGGTAGATATGGCCATATCTACTTGCGGAGCCTA 315079 29 93.1 0 .......A......A.............. | ========== ====== ====== ====== ============================= ===================================== ================== 5 29 94.5 36 TTGAACATTAACATGAGATGTATTTAAAT # Left flank : ATGTTTCATAAAAAAATAGATTATGAAAATATTAAAGAAGAACAATTAGATGAAATTTTAGAGGGGATAAAAAAAGAGTTTTATGATCTAATAATATCAGTAAAAGAAGAAAATAAAAACATAATATTAGTTACTAATGAAGTAGGTTATAGCATTGTTCCAGCCTATAAATTAGGCAGGATATTTAGAGACTTTCAAGGTATTATAAATAAATTTATAGCCTCTTTAAGTGATGAGGTTTATTTAGTAACCTGCGGAATACCATTAAAAATAAAATAAAATTAATTTTAGTAACTAATTAATCTAATTATAAGTAAAAGAATTTTCAAACCGCATTTAATTTTAAAATATATTCTAGGCATTGAAATATAAGCCTTAAGATAAGCTTTATCTCTATCTTTATAAAAAATGGCAAACGGTTGGAAAAAATTCTTTAAAATCTTGTAAAATCAAGGCTTCTATGATATTCTTAGAATTAAGAAATGGCTATTTTACTATGG # Right flank : CAGCATGTAAGATAAGGTGATTCAAAATAAATTAAATCTATTTTGAATCACCTTATTTTGTGTAATAAATACTAGCTATTTTAGATGATATTTTAAAAAAGCATATAATTATTATTTTATATTGTCACAATAAACATTAATAGCTTCCTTTAAAAATTTAGAAAGACCAGTTTTATATTTATCTATATTAGTAGTAAATCTTTCATCATTAACATAAAGTTCTCCAAGACCCCTAAATATTTCAGGGGTACAATCATAAAAGTTTTTTGAAATATGCTCCCTAAATTGGTGGACAGATTCTTGAACTTCCTTATCATCTGGATTTTTGTCCATAAGATTTGCTAGTTTTTTAAAAATTTCATCCCAACCTTTCATTATATTACTCCAGTCTTCCTTTGTATATTTGGATGTTTTTTTATTACTTTCCTTATAGGCAGAGGTATTACCGTATTTTTCTTTTATCTCTTCTGAATATTTTCTTTGATGCTCCTCTATTTCAG # Questionable array : NO Score: 3.79 # Score Detail : 1:0, 2:3, 3:0, 4:0.72, 5:-1.5, 6:0.25, 7:0.01, 8:0.8, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTGAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 1 279803-280097 **** Predicted by CRISPRDetect 2.4 *** >NZ_LBFH01000016.1 Clostridium botulinum strain Walls 8G contig_46, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 279803 30 93.3 35 ...A.............T............ TGGGAAAATATACTTGCAACTAATCAAGAAATACC 279868 30 100.0 36 .............................. CAAATAAGGAAAAAGAATATCTTATACACCCCCGGG 279934 30 100.0 37 .............................. CCAAATTCTCTGCCAGATCCTTCAAATTCACTAAGTC 280001 30 90.0 36 ............T..A....A......... TTGCACGTCCCATAAGGGGACTGATATCAAACTGTT 280067 29 76.7 0 ........A......A.T..A.-.AA.... | TG [280073] ========== ====== ====== ====== ============================== ===================================== ================== 5 30 92.0 36 GTTGAACATTAACATGAGATGTATTTAAAT # Left flank : AAGCGGATTTGCATTTAAAGAGGTAAAAGGTGGAGAAGAAAAAAGATTTGATATAGTAATAACCTATAATAAAAAAATGTATATTTTAGAACTTAAAATATGGAGAGGTGAAGAGTATCATAAAAAAGGCTTAATACAGCTAGCAGAATATTTAGAGCAATATAAATTAGATAAAGGGTACCTTTTAATATTTGATCTAAGAAAATCCACAAATTTAATAGTAGAAGTAGAAGAAAACTATATAGGTATAGAAAATAATAGTAAAAAAATAATACAGGTTTATTGTTAAAAAGTATATAGCAGTTAAAAATTATTTCTAAATATTTTTCCAAGTGAATTAAAAGTCTAAACCTATTCTAGCCATTGAAATATAAGGCCTAGGATAGGTTTTTATTATGAAATTTTAAAAAACAAAATCACTTGGAAAAATTTCTATAAAACCTTGTAAAATCAATGGTTGTATGATATTCTTAAAAATAAGGAATGGCTATTTTACTATG # Right flank : TTAATATGATATATAATAAGAATCATTAAAAGTCTTAGAAGAATCTAAGGCTTTTATTTTATGCAAAGCTTTAGAATGAAATATGATAGGTAATTAACTTATCATTAATAAAGATAATAATATTTTTAAAATAAAAGTAGAATAATTAGTTATATTAACTAAAGGGCATATGGTATAATATAGATAAATTTGTATAAAGAGGTGTATAAATGGAATTTTGGGAACTGATTGTAACAGCGATGTTGAAAAAAGACATATATTTTGAAGATTGTGGGTATATAATAGGGAAAAATATAAATAAAAGTATGCTTTGGGATAAGGACTTAAAGGAAGTACATCCAAAGAAACAGTATAAAAATTATGTGTTTAATAGTTTTTATCCTATAGAAAGAGATAAATTTTATAAAAAAGATAGGTTGTATATTTTTAATATTAGGGGATTAAGTAAAGAATTTATAGATAAAATAGAAACTTGCTTATGTAATTTAGAAAGTAATGAT # Questionable array : NO Score: 5.65 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 2 292920-293079 **** Predicted by CRISPRDetect 2.4 *** >NZ_LBFH01000016.1 Clostridium botulinum strain Walls 8G contig_46, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ====================================== ================== 292920 28 100.0 38 ............................ TAAAAGATAAGGAGGGTAAATCAAGAAGGATATTTTTA 292986 28 100.0 38 ............................ ATTCATTTGACGACCATATGTAGAAATAAGGAAGGATG 293052 28 89.3 0 ...............T..G........G | ========== ====== ====== ====== ============================ ====================================== ================== 3 28 96.4 38 TTGAACAATAACATAAGATGTATTTAAA # Left flank : CAGCAAGAAAGCAGATGAAGGTTTTGTTTTAAATACAAATGGAGAAGAATCAATTATTAATGCTGATAGTGCTGTTGTAGCTATTGGATATTTATCTCAAAATGACCTGTATAACCAGGTTAGATTTGATATTCCAAATGCAAGACTTATTGGAGATGCTAATAAAGTTCAAAATATTATGTATGCTATTTGGAGTGCATATGAAGTAGCTAAAAACATTTAAATAGACTTTTGCAAAAAACTAGAATGGGTTTATATCCATATCTAGTTTTTTGTTTTTTACTTAAATTCTATAAGTATATGAGTGTTTGTTAGGTTATATTTTCCCAAGCGAATTCACATTTAAAGCTTATTCTAAGCATTGATATATAAGCATTAGAGTATGTTTTCATTATGAATTTTTAAAAAAGTAGAATCACTTGGAAAAATTTCTGTGAAATCTTGTAAAATCAATGGGTATATGATATTTTTAGAAATAAGGAATGGCTATTTTACTATGA # Right flank : GCAGTAAACCCAAATCTTTGATTTCGCGTGAGTCGCTTACTCCTTCGAGAATAGGAGAAGGAGTTTCGTTAATGAGCATAGTATATATCTAATTAAATTTTTCCAAGTGAATTTAAAATTAAAATCTATTATAGCTATTGATATGTAAGGCTTAGAATAGGTTTTTATTGTGAGTTTTTAAAAAAGCAAAATCAGTTGGAAAATTTTCTATAAAACTTTGTAAAATCAACACTTATATGCTATTCTTAAAATTAAGGAATGGCTATTTTACTATGGTTGAACATTAACATAAGATGTATTTAAATCAAACTGCTTCTAAAGTATCTCCAATTTCTTCACCTGTTGAATATTAACATAAGATGTATTTAAATATTATGATGGTGATATAGTTTATGATAGCGATAAGGTTGAACATTAACATAAGATGTATTTAAATTTGTATATTCTTTTCCATCTATTGTAACTGGTGTTCGTTGAACCTTAACATAAGATGTATTTAA # Questionable array : NO Score: 5.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTGAACAATAACATAAGATGTATTTAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:82.14%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA // Array 3 293354-293646 **** Predicted by CRISPRDetect 2.4 *** >NZ_LBFH01000016.1 Clostridium botulinum strain Walls 8G contig_46, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 293354 30 100.0 36 .............................. CAAACTGCTTCTAAAGTATCTCCAATTTCTTCACCT 293420 30 96.7 35 ......T....................... ATTATGATGGTGATATAGTTTATGATAGCGATAAG 293485 30 100.0 36 .............................. TTGTATATTCTTTTCCATCTATTGTAACTGGTGTTC 293551 30 96.7 36 .......C...................... TTATATAAATCATCAAAAGCGTTATTTTTTTCTAAA 293617 30 93.3 0 ............................GC | ========== ====== ====== ====== ============================== ==================================== ================== 5 30 97.3 36 GTTGAACATTAACATAAGATGTATTTAAAT # Left flank : TGAAATCTTGTAAAATCAATGGGTATATGATATTTTTAGAAATAAGGAATGGCTATTTTACTATGATTGAACAATAACATAAGATGTATTTAAATAAAAGATAAGGAGGGTAAATCAAGAAGGATATTTTTATTGAACAATAACATAAGATGTATTTAAAATTCATTTGACGACCATATGTAGAAATAAGGAAGGATGTTGAACAATAACATATGAGGTATTTAAGCAGTAAACCCAAATCTTTGATTTCGCGTGAGTCGCTTACTCCTTCGAGAATAGGAGAAGGAGTTTCGTTAATGAGCATAGTATATATCTAATTAAATTTTTCCAAGTGAATTTAAAATTAAAATCTATTATAGCTATTGATATGTAAGGCTTAGAATAGGTTTTTATTGTGAGTTTTTAAAAAAGCAAAATCAGTTGGAAAATTTTCTATAAAACTTTGTAAAATCAACACTTATATGCTATTCTTAAAATTAAGGAATGGCTATTTTACTATG # Right flank : CAGGGAAGCAAAATCTCTAATTTATCGTGAGTCGTTTACTCCTTCGAAAAATAAGAGAAGTAGTTTCATTAATGAGCAGAGATATATTTTATATTTAACTAATTTTTTTCACGTGAATTCAATTTTAAAATCTATTCTAGCTATTGAAATGTAAGTCTTAGAATAGGTTTTTATTATGTATTTATGAAAAAACAAAATCACTTGGAAAAATCTCTATAGAATATTGTAAAATTAATGGTTATATGATATTCTTAAAAATAAGAAATGGTCATTTTACTATGGTTGAGCAGTAACATGAGATGTATTTAAATGTATCTAATATCTTGCAATGTCTATTGGCTCCTCTCTTGAACATTAACATGGGATGTATTTAAATATTCTTGCCTTTTCTATTTGTAGCTCTATACTATTTGTTGAACATTAACATGAGATGTATTTAAGCAGGGAACCCAAATTTACAATTTGGTGTGAGTCACTTACTCTTTAGAGGTAACGAAAAG # Questionable array : NO Score: 5.84 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATAAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 4 294626-294340 **** Predicted by CRISPRDetect 2.4 *** >NZ_LBFH01000016.1 Clostridium botulinum strain Walls 8G contig_46, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== ======================================== ================== 294625 26 100.0 39 .......................... ATAGATGAAATAGAAATAGTTATAGATTTAATTGAATTT 294560 26 100.0 40 .......................... GTTAAAGAAGATGAAAAAAGTAAATAGGTGATATTAATTT 294494 26 100.0 39 .......................... GGACATGAAGATATACTAGCCACACCGTTAGACTAATTT 294429 26 100.0 38 .......................... ATAATAAATATGCATGTGAATATGTACTTAGCTTATTT 294365 26 96.2 0 ..........C............... | ========== ====== ====== ====== ========================== ======================================== ================== 5 26 99.2 39 AAATACATCTTATGTTATTGTTCAAC # Left flank : CATATGAAATAACTGTTAACTATAAAGCGAATGAAAATTTAGGTGAAGAAAATTATAATAAATTTTGGAGTGACAAAAAAGCTGACAAGCTTTTAGAAAAGAATGCGGTAGTATTATTATCTCTTATACCAAACGCTGAAATTATTAAATTTAATGTAGACAATATAGGAGAAGAATCCTATAAATATGATAGAAAAAATTTAGAACAAAAATATGGAAACTTAAAAGACTTATCTAAAGATAATGATTCATTGAAAAAATTTTTAAATAACTAGTATCTAACAATTTATATAGACTCCATTAAAAGAAAATATTTAACTTCTTTTAATGGGGTTTAAAATTCCAATACCACTCTAAAGCATAGCCAAAATTAAAACTAAATTTTAAAAATATTTTAGTCAATAAAAATCTACTCAGATTCACTTGTTTTATGAAACTGATTCTCCATATCTCAATGAGTAAGAGATTCATCCTAAATCACAGATTGGGGTTCTATGCTC # Right flank : CATAGTAAAATAGCCATTCCTTATTTTTAAGAATATCATATAAGCATTGATTTTACAAGGTTTTGTAGAAAGTTTCCCAAGTGATTTTGCTTTTTTGTAAATACAAAATAAAATCCTATCCAAAGCCTTATATATCAATGGCTAGAATAGGCTCTGAATTTGTTACACCTGGGAAAATTAAATTTATGAAACTCCTTTTCGTTACCTCTAAAGAGTAAGTGACTCACACCAAATTGTAAATTTGGGTTCCCTGCTTAAATACATCTCATGTTAATGTTCAACAAATAGTATAGAGCTACAAATAGAAAAGGCAAGAATATTTAAATACATCCCATGTTAATGTTCAAGAGAGGAGCCAATAGACATTGCAAGATATTAGATACATTTAAATACATCTCATGTTACTGCTCAACCATAGTAAAATGACCATTTCTTATTTTTAAGAATATCATATAACCATTAATTTTACAATATTCTATAGAGATTTTTCCAAGTGATTT # Questionable array : NO Score: 6.02 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AAATACATCTTATGTTATTGTTCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.92%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 5 301209-301436 **** Predicted by CRISPRDetect 2.4 *** >NZ_LBFH01000016.1 Clostridium botulinum strain Walls 8G contig_46, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 301209 30 100.0 35 .............................. AATTCGGATTCAGCTTCTATGTTTCCCATAGCCGC 301274 30 100.0 37 .............................. TCTAATGTAAAATATTCTATTGTCCTATCTTTATCTA 301341 30 100.0 36 .............................. CTTAATTCGTGAAGTACTTCTAACATCTGATTATGT 301407 30 90.0 0 ........T...................GC | ========== ====== ====== ====== ============================== ===================================== ================== 4 30 97.5 36 GTTGAACAGTAACATAAGATGTATTTAAAT # Left flank : CAAAAGCCTATATCCATGTATTTACTTTGTTTTTTGTAGTAAACATTTATGATATGATTGTTCTAGATATAGGTCTTTTTTGTCACAGTAAAAAAACTAGAATACCTGGTACAGAAGATATGGATAAAGAATATAGAAATCCATGGCATCATATAAAAGGAGCTGGTATTGGAACTATAATAGGTGCTGTAGTAGCATTATTATCTAGAGGAATGGTTCATTTTATATCAATAATATAGTATTTAAGCAGGGAACCCAAATCTACGATTTGGTGTGAGTCGCTTACTACTTTGAGAATTGGAGAAGTAGTTTCATAAATTAAATTTTCCAACCACAATAAATTTAGAAACCTATTCTAGCCATTGGTATATAAGGCTTAGAATAAGTTTTTGTCATATGTTTTTGAAAAAATAAAATCACTTGGAAAATTTTCTATAAAACCTTGTAAAATCGATACTTATATGTTATTCTTAAAACTAAGGAATGGCTATTTTACTATG # Right flank : CAGAGAACTTAAATTTGTGATTTGGTGTGAGTTGCTTGCTTCTTGGAGGAGAGGAGTAGGAGTTTCATTAATTGAATTTTTCCAGGTGCAATAAATTTGCGAGCCTATTCTAGACGTTGATATATAAGGCTTAGAATAGGTTTTTATCATGTGCTTATGAAAAAACAAAATCACTTGGAAAACTTTTTCTAGAACCTTGTAAAATCAATGGTTGTATGATATTCTTAAAAATAAGGAATGGCTATTTTACTATGATATTGAACATTAACATAGGATGTATTTAAATGTCCTTTCTTTTGTTTTATCTATAAATAAAGTAAGAGTTGAACTTTAACATGAGATGTATTTAAATTTTATTGCTTTACTAATTGTCCGTAGATCTTTTTTAGTTGAACCTTAACATGAGATGTATTTAAATTTGTATTCATTTATTGTATTCTTAAATACATTCTCGTTGAACATTAACATAGGATGTATTTAAATCCATAAATATCTAATAC # Questionable array : NO Score: 5.74 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAGTAACATAAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA // Array 6 301693-301983 **** Predicted by CRISPRDetect 2.4 *** >NZ_LBFH01000016.1 Clostridium botulinum strain Walls 8G contig_46, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 301693 29 100.0 37 ............................. GTCCTTTCTTTTGTTTTATCTATAAATAAAGTAAGAG 301759 29 89.7 37 ......T.......GA............. TTTATTGCTTTACTAATTGTCCGTAGATCTTTTTTAG 301825 29 89.7 36 ......C.......GA............. TTGTATTCATTTATTGTATTCTTAAATACATTCTCG 301890 29 100.0 36 ............................. CCATAAATATCTAATACAGAAAACTTAGAAGATACA 301955 29 79.3 0 ....G..A......GA...........GC | ========== ====== ====== ====== ============================= ===================================== ================== 5 29 91.7 37 TTGAACATTAACATAGGATGTATTTAAAT # Left flank : TGGCTATTTTACTATGGTTGAACAGTAACATAAGATGTATTTAAATAATTCGGATTCAGCTTCTATGTTTCCCATAGCCGCGTTGAACAGTAACATAAGATGTATTTAAATTCTAATGTAAAATATTCTATTGTCCTATCTTTATCTAGTTGAACAGTAACATAAGATGTATTTAAATCTTAATTCGTGAAGTACTTCTAACATCTGATTATGTGTTGAACATTAACATAAGATGTATTTAAGCAGAGAACTTAAATTTGTGATTTGGTGTGAGTTGCTTGCTTCTTGGAGGAGAGGAGTAGGAGTTTCATTAATTGAATTTTTCCAGGTGCAATAAATTTGCGAGCCTATTCTAGACGTTGATATATAAGGCTTAGAATAGGTTTTTATCATGTGCTTATGAAAAAACAAAATCACTTGGAAAACTTTTTCTAGAACCTTGTAAAATCAATGGTTGTATGATATTCTTAAAAATAAGGAATGGCTATTTTACTATGATA # Right flank : CAGAGAACTTTAATATGTAATTTGGTGTGAGTCGCTTACTCTTTGGAAGCAACGAGAAGGAGTTTTATAAATTGAATTTTCCAGGCGTAATAAATTTTAAAACTTATTCTAGCTATTGAAATATAAGGCTTAGAATAGGTTCTTGTTATGTCTTTATAAAAAATGGGAATTAGTTGGAAAATTTTCTATAAAACCTTGTAAAATCAGTGGGTGTATGATATTCTTAAAAATAAGGAATGGCTATTTTACTATGATTGAACATTAACATAGGATGTATTTAAATGCGTGATTAGTTCCTTTTACTCCTTCGTAAATCAATATTCAACATTAACATAGGATGTATTTAAGCAGAGAACCCAAATCTACGATTTGGTGTGAATCGCTTACTCTTTAGAGAATGGCATAGGGATTTTTATAAAACTAAACTATGCATTATGATAACTTCTATATAAATTATTAGATAAAGGGGGATTTTATGAAAAATAAAGTTACTAATAATT # Questionable array : NO Score: 5.57 # Score Detail : 1:0, 2:3, 3:0, 4:0.59, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTGAACATTAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [3-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA //