Array 1 65726-68037 **** Predicted by CRISPRDetect 2.4 *** >NZ_CADFCN010000004.1 Burkholderia gladioli strain BCC1862, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 65726 28 100.0 32 ............................ TTGACGTAGGTGCCCTTGCCGTTCCCCGACGC 65786 28 100.0 32 ............................ ACCTCCAACAGCTACCTCCCTTCGCGCTTCCG 65846 28 100.0 32 ............................ CAGAAAAACCCAGTGGGTTTTCTTTGGAACCC 65906 28 100.0 32 ............................ ACTGAGCTGCGAGGGATCATCAGGGATGTCGC 65966 28 100.0 32 ............................ ATATGCTGGTGCGCCCACGTACAGAGAACGCC 66026 28 100.0 32 ............................ ATCAGGCACGCATCGGATGCTTTGATGCCCTT 66086 28 100.0 34 ............................ CTACGTCTGCGAAGGTGGCGTGATGCTCGACTAC 66148 28 100.0 32 ............................ AGCAGATGAGCGCGATCACGAGCGCGATCAGC 66208 28 100.0 32 ............................ TCTCGCGCATCACGCTCGAAATCACTGGCGTG 66268 28 100.0 32 ............................ TGGGGGGCTCCGGCGACTCAGGCGATTCCGAC 66328 28 100.0 32 ............................ GCCGTTCGCGCGGATTCTGCGATTACGACGAC 66388 28 100.0 32 ............................ TCAAAGAAAAAGGGCCGCACTCGGCGGCCCTT 66448 28 100.0 32 ............................ AGCCGTACTCGAACGTCTCCTGGCTGGGATTC 66508 28 100.0 32 ............................ ATGCGGCGAAGACGGGCCAAAGCTTTTTCCGG 66568 28 100.0 32 ............................ CAGTACGCGAGCGCGGCCGGCTGCAGGCGATG 66628 28 100.0 32 ............................ TTGCATGCGGCGCGAATTGCTGCGCGCGGATC 66688 28 96.4 32 .........T.................. TTGAAAAGTTCCTTTGCGACGGCGGGGCCGAA 66748 28 100.0 32 ............................ GGCACATCCGATGCGCAAAAAAGCAGTCGAGA 66808 28 100.0 32 ............................ ACCGGGGAAAGCATGGGCTGGCACTCCGGATG 66868 28 100.0 32 ............................ CGCGGAAACCCATGATCGGTTGCTCGCGCTTG 66928 28 100.0 32 ............................ TACGTCGCCGATGCTGATGACGGTCGCGCGAA 66988 28 100.0 32 ............................ ACGGAGCTGGCGGACAACGACCTGATTCTCGA 67048 28 100.0 32 ............................ CACTCGAAAGCCAGATGGCTGCCGAGGAAGTC 67108 28 100.0 33 ............................ TCGAGCATCCCGAGGCACCGCTCGAGCATCTGC 67169 28 100.0 32 ............................ GCAGCAGTGGGTCGAGAAGCTGTTTTCGAAGA 67229 28 100.0 32 ............................ TCAACAGCCGACCACGCTCGAGCAGTTGAAGA 67289 28 100.0 32 ............................ AATCAGAAGCGCCATCGTGATAGTCGGCCGCA 67349 28 100.0 32 ............................ ATCGAAAGCCGCGTGCATCGAGCCGCGCGCCC 67409 28 100.0 32 ............................ ATCTGGTCGACGATCCGCGCCTCGGATGGGGC 67469 28 100.0 32 ............................ AGCGCAAGAAGCCGGTGCCGGCGCCCGCGGAT 67529 28 100.0 32 ............................ TTCATTCCGCCGCCGTGTCGGCCGCCACCGCC 67589 28 100.0 32 ............................ GCTCGCGATGAAGGTGGATCTTGAAAGAGCGC 67649 28 100.0 32 ............................ GCTCGCGATGAAGGTGGATCTTGAAAGAGCGC 67709 28 100.0 32 ............................ TCCGGCCGGAAGTCGGCCGCCGGCGCCGGCAC 67769 28 100.0 32 ............................ ACGCTGGCAACTTTCGCCGTCGTCGCCTTCAT 67829 28 100.0 32 ............................ CGCTGAAGTTTGCCCTGTTGGTGTTCGTCGAA 67889 28 100.0 32 ............................ TGATTGAGGTAGGCCAGCGCCATGACCGCGCA 67949 28 96.4 32 ...............C............ ACCAGCAATCCGCGCTTGATCAACTCGACGAG 68009 28 92.9 0 ...........T.C.............. | T [68033] ========== ====== ====== ====== ============================ ================================== ================== 39 28 99.6 32 GTTCGCTGCCGCGTAGGCAGCTTAGAAA # Left flank : ATGGTTTGCATTCGCTGATGGCGCAGTCCTGGCTGCAGGGGATGCGGGATCACGTGGCGATCGCGACGCTGGCGCCCGTGCCGGACGGCGCGATGCATCTGGTCGTGCGACGACGGCAGTTCAAGACCAACGCGGACCGTCTGCGGCGGCGACGGATGCAGCGCAAAGGGGAAACGGCCGAGCAGGCTGCCGCGCATATTCCCGATTCCGTCGAGCGTCGGCCTGATCTTCCGTATGTGCGTCTACGCAGCGCGAGCACGGGACAGGTGTTTTGCCTCTTTGTCGAGCAGGGGGGCGCGGTGAGCGAGCAGGTGCCTGGGGCGTTCAATGTCTATGGGCTGAGCCAGGGGGCGACGGTGCCCTGGTTTTAACCCTTTTCTTGGGCTGATTTGGTTGGCCTTTGAAATCAATGGGTTAGCGAGAGGGTGGAAATTTGGGTGGTTTGCCCTTTCGCGGGTGTTTGTTGTTTGGAAACAAGGGGTTGGAGGGGGAAGGGGCTA # Right flank : ACTGCGATATGAAAGTCCGGCAGACAGGCAAGCTTTGCCTCCAGCGCGCGTGTTTTAAAATCGTAGCGCCAACGGCATCGTCACCGAAGTCGTTGATATGACGAGGCATCCTCGCAGACTGGCTCGAATACCGAGTCGTCCGCGATTCGCGCATGTTCGCACCCGATCGCGGCACAGGCAGCGACACAAACCAGACAGAAAACAGGACAACAGGCCGATGACATTCAATCGCAAGATGGCGCAGTGGACGGCAGCCGCATTGGCCATCACCTGCCTGCAGGTGACCAACGCGAACGCACAGACCTTGAACATACCGCTCGGCACACCCGACGGATTCTCCGCATCATCGATCAAGAACGTGGGACAGGACCGCTATTGCATCAGCGGCCGCGTGTACGACGACGCGGGGCCGAGCAACACGGCGATGGCCGTGCTGGTGGACGCCCGGCATCGTACCGTGTCGTGGAAGACCTCGATCCCGCATCCGCGCGACTACGCCG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCGCTGCCGCGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //