Array 1 407047-405998 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_LT853880.1 Xanthomonas fragariae strain NBC2815 chromosome 1, complete sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	============================	=================================	==================
    407046	    28	 100.0	    32	............................	TTCGCGGGCTAACGTCGGCATAGCAGCAATGA 	
    406986	    28	 100.0	    32	............................	AAGGCGTCACGCCCGGAACGCTGATGCCGTTG 	
    406926	    28	 100.0	    32	............................	ACGATGCTGCCGCTGGTGCCGAACACGTAGGC 	
    406866	    28	 100.0	    32	............................	AGGAAGATCGCCAGGAGGACCAGGACGGTGAC 	
    406806	    28	 100.0	    32	............................	GTCCTCATCTACACCACGCATCCCTACATCGT 	
    406746	    28	 100.0	    32	............................	ATGAGCGGCACCGCTCAGATAGGCAATAACAC 	
    406686	    28	 100.0	    32	............................	GTTGCCGGGTTGCCCGGTGTATAGCTCGATTG 	
    406626	    28	 100.0	    32	............................	ATCACGGTCAGTACGGCACCGCCGATCGCTGC 	
    406566	    28	 100.0	    32	............................	ACAAAGCGCGATGCACCGCGCTGGGAATCTCC 	
    406506	    28	 100.0	    32	............................	AATCACGGTGTGGTAGGTGTCGATGTGGGAAA 	
    406446	    28	 100.0	    33	............................	ATGGTCATTGCGATCAACCTGTTTACGTTCTTC	
    406385	    28	 100.0	    32	............................	GAAGACGGCAGTGTCATGCAGTTGCAGCAGAT 	
    406325	    28	 100.0	    32	............................	CTTGTATTGGGCTGTGTCTACTTGAATTGAAG 	
    406265	    28	 100.0	    32	............................	AGTACCAGGGCAACGTCCAGTGCGCATGCAAT 	
    406205	    28	 100.0	    32	............................	GCTAGCGCACTGACCATCACCAGGGAGACAGG 	
    406145	    28	 100.0	    32	............................	ACCACAATGTTAGAGGTATCGATCCACTGCAC 	
    406085	    28	 100.0	    32	............................	ATTGCGTCATGATCACAGCATCGCCGCCATTC 	
    406025	    28	 100.0	     0	............................	|                                	
==========	======	======	======	============================	=================================	==================
        18	    28	 100.0	    32	GTTCACTGCCGCGTAGGCAGCTCAGAAA	                                 	       

# Left flank :   TTGCAGATGTTGATGGCGAGACCCTGGCTGCACGGGATGCTCGATCACCTGGCGGTATCGGCCATTCTCGCTGCCCCTGCCGACACCCAACATCGGCACGTCACCAGGGTGCAGGCCAAGAGCAGTCCCTCGCGCCTGCGCCGTCGTGCCATGCGCCGTCATGGGATCGATGCAGAGACAGCCGCCCAACGCATCCCGGATGCGGCAGCCGAACAGCTGCCACTGCCGTTCGTCGTACTGGGCAGCCGCAGCACGGGACAGGCGTCATTCCCGCTGTTCATCCGTCACGGCCCCCTGCTATCGGAGCCGACGAACGGCAGCTTCAACAGCTATGGCCTGAGCCAGGAAGCGACCGTGCCCTGGTTTTGACCCTTTTTCCCGGACAGAACAAAGGCTGCTTTAGAATCAACCACTTGGCAGGCACCTTGTTTCAAAGGGTGCCTGCCCTGTTTTGTCGGTATTTCTTTTATTTATCAATGGATTGATGAAGATCTGATCTT
# Right flank :  AATTCAAGGATGGCCATACGGGTTGGATTGACGTTTGATACGCCCAGGGTTCCGTAGACCCTCAAGACCCTCGTTGCGCGTAGCGCCGTTCAAACTCTACAGGGGACAGGTCGCCAGTTGAACCGTGGCGGCGGTTGGGGTTGTAGAACATCTCGATGTAGTCGAATACCTCGGCGCGAGCGGCGTCCTTGGTGGAATAGGTCCGCCGCCTGATCCGCTCGCGTTTGAGCAGTCCGAAGAAGCTCTCCACGGGTGCGTTGTCGTGGCAGTTGCCACGCCGACTCATGCTGCACACCACGCCATGGGACACCAGGAAACTGCGCCAGTCATCGCTGGTGTAGACAGACCCTTGGTCCGAATGAACCAAGCAACCAGCGTTGGGTTTGCGCCGCCACACCGCAGACAACAAGGCCTGCACGACCAACTCGGTGTCGGCCCGATCGCGCATCGCCCAGCCGACGACCTGCCGGGAAAACAGATCGATCACAACAGTCAGGTAC

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTCACTGCCGCGTAGGCAGCTCAGAAA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [5,7] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTTCACTGCCGCGTAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-7.70,-8.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: R [48.3-65.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.51   Confidence: HIGH] 

# Array family : I-F [Matched known repeat from this family],   
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