Array 1 8613193-8613404 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGSHY010000002.1 Streptomyces indonesiensis strain DSM 41759 DSM41759-1_1_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 8613193 28 93.1 32 ............-............C... TGGTCGATGACGACGCGGGCGCGTGCCGCGTC 8613253 29 96.6 32 .................A........... GATATGGCTCCGTCCTCCGCGTTCTCTGGTGC 8613314 29 100.0 32 ............................. GAGGTGGAGATGGGGCACGCCGTGGTGAGCCT 8613375 29 82.8 0 .....................C.T.C.TT | C [8613397] ========== ====== ====== ====== ============================= ================================ ================== 4 29 93.1 32 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : GGATGGCCTTCTGGAGCGTGCCTTGGTGGAAGATGCGTGGCATTGGGAGACGTATCAGCGGCCGATTTCGGCTGAGACGCTACGGAAGCGACTGCATGTTGGCGCGGCCAGGTCCCGGACGTTGGTGTCCATGGTGCGCTCGGCAAGGGCCGGGAACGTGACGATGGAGGCATCGTCTGGAGAGGGCGGTCCTTCAGCTTCTCTGCCTTGTGATCAGGTCCGCGGCGCGGGCGAGGAGGGTCCGAGGTAGCGTCCCTCTGTGGTACCCCTCGATGCGGCGGCCTGCATAAGGGTTGAGGGACCCTACTTCCTGTCGTTTGAAGCTATGGCGAGGAAGCGGTACGACGCGGTGCTGACGACCGTCCCTGTGCTGAGGAATGGTATGGATGGCCTGGGAGCATTCGTCGTGAGATCACACAACCCATATACCTGGAATGCCGGACTTCGTGAAAGTGTTTCATGGTGAACCTGCTGCCAGGCAGACATACAGGTCAGGGAGT # Right flank : TGTTTGGGCAGGTATAAGGCATCTTGTAGTTCCCCATGTGCTCCGCAAGCTGCGCTGATCTCCGGGACGAGCGCACGTGATGGAGGGGTGAATCATGGCTCGAGCGCAAGCTGAACTTGACCGCAGTGGGGCTCGCAGGAGGTAGGGGCTTTCAAGGGGCAGTGTGGTGGTGCCCTCTGGTGTGCACCGCCGGTCGATAGTGCGGTTTCTGTCCGAAAGCGAATGCTTCGTCGGAACCCTTCCTGTACTTATCAGACATGGCATTTGGGGGCGAGTTGAGTCCGGGATTGAACGATCGGCTCAGTGGGCCAGCGCGGACGGTGTGGGCCAAGCATGACCGGGACGGTCACGGCTGGCTCCCGTTGTGGCGGCACATGGAGGACAGTGCCGCGGTGGCGGGGCGGTTGTGGGATGAGTGGCTGCCGGGCAACGTACGGGCCCTGATTTCGAGGGCGCTGCCGGGTGGGCTTGATGATGGGCGCCGTCTGGCGGTCTGGCTG # Questionable array : NO Score: 3.70 # Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:-1.5, 6:0.25, 7:0.01, 8:0.6, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [4-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 8679402-8679671 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGSHY010000002.1 Streptomyces indonesiensis strain DSM 41759 DSM41759-1_1_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 8679402 29 100.0 32 ............................. GGCACCAAGCCGAGGAGGTAGCCGGTGCCGGC 8679463 29 100.0 32 ............................. GCGTCCCACAGGTCCGTGGTCCGGCCGCCGTG 8679524 29 100.0 31 ............................. TGAGCGGCCGACCTCGCCCACCAGGCCACCT 8679584 29 96.6 32 .........................C... GCCATGCTGGTATGGATCGAGGAAGCGGCCGA 8679645 27 82.8 0 ..........--.G.............TA | ========== ====== ====== ====== ============================= ================================ ================== 5 29 95.9 32 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : ACCGGAGATCGTCCTGCTGGCACGGGTGGAGCTGTCGACAAGCAGCGTCGCTAGGGGCTGTGCTCGTGGACGGTTCAAACCCTTTACTACTCCAAGGATTTGGCCCTCTTGGTGCGGCTGATGTTGCCGGGGTCTGTAGCTCTGTTCACACGCCTGAGCGTCGTAGTGCGAGGGGTGTGGAATGTGCTTGTCTCGGCGTCGTGGCTGAGGTTCGTGAGGTAGTTGTTGGGCAGGGTTCGGTTGGTTTCTGTGTGACGTGGGCGCGCACCTGGCGGGTGCTGTGGACTCTTGAGGACTGACTGTGCCAATAACGGTCGTAGGAAGGCTGTGTTGATCGGGAAGGGGTTGGTGGCCATGGTGGCCGAGGTGTGGGCTTTGGGGAAGGGCGGGTCGACCACGCAACCATGGTCCGGATCTCAGAAGAGATGGACGCTTATGTTCGGGATGCCGGAAATCGAGAAAGTGCTCTGCACACTACCTGCTGGCAGATAGAAGGCAGC # Right flank : ACACCTCACAGCAGATCGGTGGCGCCATCCGTACGCCTTGCTGACGCGATGGTGGCGAGCGTCACCACCCCCGTCAGTATCGTCGCTAGCTTCCGCGAGGTCTGATCCGAGTCCGAGCTCTTCACCCTGCCCGAGATCAGCGCCGTGATCTCGCACTGGTACGTCGTAATGATATGAGGCCGCGTTCTCCAGTCTGCTGTCCACCTTCGCACGCAGTGCCGGGTCGGTCGTCAGGTGCAGCCGGACGGTCCGAGATTCGATTCGACAGGTTCTTGACTACTGCTCCTTGTGCCCCGCTTGCTGGGCACGACTCACAAGGTCCGCGTGATGTTTGGGCCACTCCGCCAGCGGCGTGAGAGCTGTCAGCAGCTCGTCGGCAGCTGACGTCAATTGGTAGCGGGCACGGTAGGGAAATGTGGGCTCGCGGTGGCGTTCAATGAGTTCCTCCCGCTCCAGGCGCCTCAGGGTTCGGTTCAATACACTTTCTTGAAGGTAGAGGT # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [43.3-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //