Array 1 5371-119 **** Predicted by CRISPRDetect 2.4 *** >NZ_PYSV01000023.1 Deinococcus arcticus strain OD32 contig23, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 5370 37 100.0 35 ..................................... AGCGATGACTACGCCCAAACCCTCACAGACCGCTT 5298 37 100.0 31 ..................................... TTTAACGTGATGGTCATCACCCTGGCCGCCA 5230 37 100.0 33 ..................................... CTCGAAGCAGCGCACCACGTCGCGGTTGATCTG 5160 37 100.0 36 ..................................... CACCACAATCAGGGCATTGTGCCGGGTAAGCTCCGG 5087 37 100.0 34 ..................................... AGTTCCTTATAAGCGGCAGCGTCCACCCCGGGCG 5016 37 100.0 34 ..................................... CCTGTCTCGGTAAGCCCGTACAGGGTGCGGCGCG 4945 37 100.0 35 ..................................... TGGTGGTCGAGCGCGAGGTGCTCAGCCCCACCGTC 4873 37 100.0 35 ..................................... TCGGCAAACTCGCTCATGTCGCCGGATTCAAACGC 4801 37 100.0 35 ..................................... CCGAAGAGGTGTACGTGATCCTGGGCGCCCTGGGC 4729 37 100.0 35 ..................................... AACGCGCAGGCCCTGGAAGCCAAGGGCCTTGTGGG 4657 37 100.0 34 ..................................... AGTGGGGCCCGTGGCGGTGCTGCCCGGGCCGCCG 4586 37 100.0 37 ..................................... AGCAAGCGTTTTGACGCCGTGGTGGGTAAGGTGGTCC 4512 37 100.0 33 ..................................... GCATGCTTTCCGGTCACCGAAAAGGGCGGCGTC 4442 37 100.0 34 ..................................... ACGTACAGCCCCCTGAACGCGGACAAGACCGCGC 4371 37 100.0 34 ..................................... TCGATCTGGCCCTCCGCGCGCAGGCTGGCGGCCA 4300 37 100.0 34 ..................................... TTCGCGCAGATCGTTCAGCACCCTCTGTTCCAGC 4229 37 100.0 40 ..................................... TGTTTCCCCTCAAGAGTGGCGCAGCCAGCACGATGCCCCG 4152 37 100.0 35 ..................................... GCCGCGTAGTACACGCCCCCGTTTTTCCGGCCGGC 4080 37 100.0 33 ..................................... TTTCTCGAACACGCGGGCCTGCGCGTCGCCCAC 4010 37 100.0 35 ..................................... GGATGGACGATAGGCACCGATTACCTGCCCGTTGG 3938 37 100.0 33 ..................................... TGTTGTCTGCGGTGCATCAGTAGTCCCCATCGG 3868 37 100.0 33 ..................................... ACTCAGGCGCAGCCACTGCACCCCCGGGGCGGG 3798 37 100.0 34 ..................................... ACCCCCGCAGAGCTGCCTGCGGTCCTCAAGCCCT 3727 37 100.0 35 ..................................... TGCCGGATCTGGGCGCCCAGCTCGATGCCCAGCAG 3655 37 100.0 35 ..................................... TCGGTCATGGCCTTGGTTTGCAGGTCGAGCACCGC 3583 37 100.0 35 ..................................... CTCTCGGGTGGCGCCGGGCAGGTTGCTGTCTGCCA 3511 37 100.0 34 ..................................... GTTCAGGGTGTAGGTGGTGGCGGGGGCAGCGGTG 3440 37 100.0 34 ..................................... ACGCCGATCGACTGGCGCAGCCGGCCCGTATCGA 3369 37 100.0 34 ..................................... TCCAGCAACACCAGGGCCACGTCTTGTGTGATGG 3298 37 100.0 35 ..................................... TGCGTGGCTGTCACGTCCACCTCGCCCAGCACCGG 3226 37 100.0 35 ..................................... ATCGGCGGGTATGAGTGGCGCGTCGATGCCAGCAC 3154 37 100.0 32 ..................................... ACGGGGCTATAGCCAATACTCAGCTCGTTGAT 3085 37 100.0 34 ..................................... ATCGGCCATAACCCGGGAAAATTCGGCCAGCAGC 3014 37 100.0 35 ..................................... TGCCGGAGTTCCTGCGGGCGCTGACGGCGGGGGGG 2942 37 100.0 35 ..................................... AGGTTTTTGGTGCGGCGGCGGGTACCGTCAGCAAA 2870 37 100.0 35 ..................................... GCGGCGGATGGTGCGGAGTTTGGACGTTGCACTAT 2798 37 100.0 36 ..................................... CGGGTGGCGGTGTCGAGTGCGTGACTGTCCCCCCCG 2725 37 100.0 37 ..................................... CCCATGACGGTGGTCGATGCGGCCCGTGGCCTGCTGG 2651 37 100.0 34 ..................................... TAGTGGAAAATGGGGGGCGCGTGCCCCCCCCGCC 2580 37 100.0 34 ..................................... TCAGGTCCACCAGGGCGGCCACGATGGGCGCGCA 2509 37 100.0 33 ..................................... ATGTCAGCGGCCGTGGGCCCGCCCTGCACGCTG 2439 37 100.0 34 ..................................... CACGGGCGGGGGGTGCTGGACGTGACCCGCCCCA 2368 37 100.0 36 ..................................... ATCTGGGCGCAGGCTGCAGCCGGGCACGCGGCGCAG 2295 37 100.0 35 ..................................... ACCCCCCAGCGCCCGCACCTGGGCGCAGAGCTGCG 2223 37 100.0 33 ..................................... TAAAATTCGTTTTAGGCGAAATTTAATGCCCTG 2153 37 100.0 34 ..................................... CACGGTGCGGCTGGGCAATCTCAGGGCAGCAGAC 2082 37 100.0 34 ..................................... TTGGAAGGTTTTGAGGCGGCGCGTGGTGGCCCGG 2011 37 100.0 36 ..................................... TGGACGTGGGGCATGGGGGCGCTGACCCCGGGTGCG 1938 37 100.0 34 ..................................... GGCGGTCTGCCCGTCGATCTGGGCGGTGACGGTG 1867 37 100.0 35 ..................................... CCATGCTGCACAAAGATGAAAAACCCGACCTCTAC 1795 37 100.0 35 ..................................... TCAAAGGATGACCACATGAGCAACCTGACTGAACG 1723 37 100.0 35 ..................................... AGGTGCAGGCCCGGACCAGGCAACTGGCCGCCGCG 1651 37 100.0 34 ..................................... ATCTCACCCGCGTCCAGGGCCTGCACCGGCGAGA 1580 37 100.0 34 ..................................... TTGCGGCATACACGGTGATGTACGGCGTATCGGG 1509 37 100.0 35 ..................................... CGGTGGCCGAGTGCGCCTTCCAGCAGCTCAAACGC 1437 37 100.0 35 ..................................... CTCTGGTGGTGCCTGAGCGGCTGTATGTGCAGGAG 1365 37 100.0 34 ..................................... GTCACCAAAGAGGGGCTGCTGACGGGACCACCTG 1294 37 100.0 33 ..................................... GTCCACTTCTGCACGGCCTGACTGGCCGCGTCA 1224 37 100.0 34 ..................................... TCTTTATTGCGCTCACCGCTCAAGGCAAATTGGG 1153 37 100.0 34 ..................................... AGTGGGGTTCAGCCACACGGCCCGGACGTGCTTC 1082 37 100.0 32 ..................................... TCAAGGGCCAGGGCATAGACCCCATGGCCGCC 1013 37 100.0 32 ..................................... TCCTGGGCTCGGGGTCCGTCCGGTGTCTCCGG 944 37 100.0 31 ..................................... ACCTGCTCGCCAGCGGTCTGCTGACGGTGCT 876 37 100.0 35 ..................................... AGCTGGACGGTGGCCCGTGACAGCGACAACATCCC 804 37 100.0 36 ..................................... TGGATTGCTGGGGGTCACCCCCGGCTTGAACGGCAG 731 37 100.0 36 ..................................... TCTGCGGTGGGCTGGGGGCTGACCCCGGGCATCATC 658 37 100.0 35 ..................................... GGCATCCACGTCGGCCAGGCTCTGGGCCACGGGGG 586 37 100.0 35 ..................................... TGCTGCTGGGCAACGTGGCCCTGGCCCAGGTTGAC 514 37 100.0 34 ..................................... TCAGATTCAGGATCTGGCTTCGCCCCCCACGGTG 443 37 100.0 34 ..................................... AGCAACCAGCGCGGCTTTCAGGTCGTCCCCTCTG 372 37 100.0 35 ..................................... ATCCGGATCCGCCCCATCTGGAACGCGCCGCGCCC 300 37 100.0 36 ..................................... CTTGAAATTCCCGGCCTCGGCGGCGGTTTTGGCTTC 227 37 100.0 34 ..................................... TCCCGGGTGGCGCGAAAAAGGGGTCCAGGCCAGG 156 37 100.0 0 ..................................... | G [121] ========== ====== ====== ====== ===================================== ======================================== ================== 74 37 100.0 34 GTCACAGCCCGCCTTCGGGTGGGCTGAGGATTGAAAC # Left flank : CGAGGGTGGTATGCCCTCGCCCCGTGCTCCCCGCTGCTTAGCCGCCCACAGGATAGGTGCCTTCATCCTGCGGCCGCGGTAACGGCTGGGTCTCGCCCGGCACCGTGGGAGGCGGAACCTTCACCGCATGAGCACCAACACCCCAGACCAGAGCCAGCATCAAGACAATTGCGTTCATGGTTCACTCCCGTGGCGGCAACGGCCTTCGCCGTCGTCCGCGTGTACGAATCCGTCTGGATTCGTGTGCAGGAGCTTGAAACTCTGGCCCGACACGTCATGTCGAGTGACGTTTGAGGTGCCCGTGGCGTACCACGCTGGCCGCGCGAACCTGGTGCGGCGGCTTCACCCCTGGGGGGTTCGCGCGACCCCAAAAAAGTCGCCCGGGCGAGCAGGGTTCAGAAAAATGCGCGGAAGGAAGCGGCGGCCTGTGCTCCTTGTGCGCACGGTTCGCGCAAATCGCCTGGAAAGTTGCCTTCTGGACGTGTAAAAGGCAAACTACT # Right flank : CCTGTTGCGCAGTAGCCGAAGGGGGAGCGGGGCGACGGGAACCGTCGCCCCGCTGGCTTAGCCCTAAATTTAGTGTGTGGATAGGTAGAGTCGGCGTTGCCAGCGGAGATTGACGAGTC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACAGCCCGCCTTCGGGTGGGCTGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-11.30,-15.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : NA // Array 2 16785-19729 **** Predicted by CRISPRDetect 2.4 *** >NZ_PYSV01000023.1 Deinococcus arcticus strain OD32 contig23, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 16785 37 100.0 34 ..................................... TCTTCGGGAACGGCTGGACGCTGCCAGGTACTCA 16856 37 100.0 35 ..................................... TGGCCACCCTCGGTGTAGAACACCACGTCACCCGG 16928 37 100.0 34 ..................................... GATGGTCAGGCCGGCATTCACGGCCACCGGACCC 16999 37 100.0 34 ..................................... GAGCGGTACGGCATCCGAACGCCCCTGCAGCAGG 17070 37 100.0 33 ..................................... TGGCCGCACTGGCTGTCGGGCGCGTGCCGCCCT 17140 37 100.0 32 ..................................... CGGCGGCCTTTTGCCTATGAGCGTAGCCGCAG 17209 37 100.0 34 ..................................... CCAGGCGCCCTGGTCCACGTCGCGGCTGCCGATC 17280 37 100.0 34 ..................................... CGGGCAGCTTTGGGTGATCTGATGGGCCCCCAGT 17351 37 100.0 32 ..................................... CAAGGGTTGCCAGCCGAACGCCTGCGAGTTGG 17420 37 100.0 35 ..................................... ACCCCCCAGCGCCCGCACCTGGGCGCAGAGCTGCG 17492 37 100.0 33 ..................................... ATTTGATGCTCACGCGCCAGCTGGTCTATTCGG 17562 37 100.0 34 ..................................... TGGTGGTGCTGATCGCGCTGCGCTTTTTCGCCGG 17633 37 100.0 33 ..................................... TACATGCGCGACACGCTCGTCGAAACCGACCAG 17703 37 100.0 35 ..................................... TACGAGGTGCCCGACCTCACGCAGTACCAGATGCC 17775 37 100.0 33 ..................................... CCGCCGAGGGGGCCGCCCCGGCTGAAAAACCGG 17845 37 100.0 32 ..................................... TGGTGGGCCCCCAGGTGCAGAAACAGCCCCAG 17914 37 100.0 34 ..................................... CTTCACAGACACCTCAGCAGCCCGCACGGGGCGA 17985 37 100.0 34 ..................................... GCCGGGGGGGTCGGCGCCGTGTCCAGCACAGCGT 18056 37 100.0 34 ..................................... GTGGAACGCTACGGCATCGGCATCGAGCCGCCTT 18127 37 100.0 34 ..................................... TCGTACATGGGGCCGCTGACGAAGAGGCCCACAT 18198 37 100.0 34 ..................................... CGGGGCAGCCTGTATGACACGGCCGCGCCCCTGG 18269 37 100.0 37 ..................................... ACCCGGCACGCCCCAGACTTCGGTGCCGACCTCCGGT 18343 37 100.0 35 ..................................... CGCACCAGGGCGACGGGCTTCATCGTGGGGTGCAG 18415 37 100.0 31 ..................................... AGGCTGATGTGCGTGGTGGTGTTGCCCCCGA 18483 37 100.0 32 ..................................... AGCCGCTTGACCTGCAGCGGCGCTTGCGCCCC 18552 37 100.0 34 ..................................... GGGAGGCGGGCAACTGCCCCCTGACAATCAGCTG 18623 37 100.0 33 ..................................... CTGCACCATGAGGACAAACTCCCCGGCTCTATC 18693 37 100.0 34 ..................................... CTCGCCCTGGAAGCCATGTTCCGGCAGGTGGAGT 18764 37 100.0 35 ..................................... CCGAACTGACGCAGGCCGTGCACCGTCATCAGCCC 18836 37 100.0 34 ..................................... CAGGTACTGCAGCCGGTGCTCACGCACCATCAGC 18907 37 100.0 35 ..................................... GCTAGAGTGAGCTGGGCAGTGGCCGTTTCGGTGGC 18979 37 100.0 34 ..................................... CCGGAGGTGAAAGGTATGGCAGAGGAAGGCAGAG 19050 37 100.0 35 ..................................... ATCCGGGCCGTCTTGAGCAGTTCGTTGTAGCTGGC 19122 37 100.0 34 ..................................... ACTGCCCCTCGCCTCCCAGCAGGGCCTGTGCCTG 19193 37 100.0 36 ..................................... CGCAGTGAGTACGGCCCAGACGGCGTAAAAGCCCTG 19266 37 100.0 35 ..................................... GTAGGGCGCTGCTGGTAGAGCGCGGCAAACTCAAA 19338 37 100.0 34 ..................................... ATGGACGACATAAACGCGCCGTTGGCATCGGTGT 19409 37 100.0 33 ..................................... CAGCGACACGAACTGCTTGCCCTGGCCCTTGGC 19479 37 100.0 35 ..................................... AGGGGGCTGCCAGCCGGCAGGGCGGCCAGCTGCAC 19551 37 100.0 35 ..................................... TGCAGCGTGGTCAACGCAGACCCCACAGCGCCGGC 19623 37 100.0 33 ..................................... ATGAGCAATCCCGTGATGCTCCTGAACCACGAC 19693 37 94.6 0 ........................T...A........ | ========== ====== ====== ====== ===================================== ===================================== ================== 42 37 99.9 34 GTCACGGCCCGCCTTCGGGTGGGCCGAGGATTGAAAC # Left flank : GGTGTGCTACGACGTGAATACGGAAACGTCCGCCGGGCGCCGCCGCTTGCGCCGGGTGGGGAAAGTCTGCACCTCGCACGGGCAGCGGGTGCAGAACAGCGTCTTTGAGGTCAGCGTGACCGATGTGCAGTTGCTGACCCTGCGTGAGCGCCTGCTGGCTGAGATGGACCCCACCGAGGACAGCATTCGCCTGTACCGCCTGCGCCAGCCGCGCGACAAATTTGTCGAGGCATACGGACGGGACCGGTACGTGAACTTCTCTGACTCCCTGATTCTGTAACTTTGCCCTGCGCGAACCCCCCGCGACGGAAAACCGCCGGGGGGTTCGCGTTGTTCCTGACTCGCGTCTGGGACGGGTTGCATGACAACTTGGAAAGGCATTAAAACCTGAGGCTGGAAGCGTAAAAGAGGGTTCGCGCAGGAGAGCCGTTTTGTGATGTCCTGGCGCGGGCCGAGGATTGAAACGCGGGGGTCATGTACATCCTGCTGGGCCTGCGCCA # Right flank : CTGTCAACGGTTGAGCCGCTTGCCGATGTCCACGTCTGTTACAGCCCGCCCTCGGATGCGCTGAGGGAAACGTGGCTATGCCGCAGGCAGAGATTCAGGTTCTGGGTCTCAGCCCGCTTCCGAGTAGGTCTCACCTCATCGAGTTTCACCAGCAACGGTTAGAATCTCCCGTCTCTCATCTGGTCGTCACGTGACGAGCGACATCCTGCTGAATGAAAAAGCCCTGCGCAACGCCATTCAGCGCTCTTCGCTGGCGAAGGCCAAGTAAAGCCGGGCGAGCAGCGCTGGTTGATTCAGGGATTCACCCAGCACCTCCTCTGCCCGCCGCAAGCGGGCGCGGACCGTGTTAAGGTGGACACCTTCGGCCTGTGCCAGTTTCGCCAGGTGGCCGGGCTGCTGGACGTAGCGGCGCAGCGTTTGTTCCACCCGGCCCCCATCATTCAGGGCGGCCAGCTGAGTCATCACCTGCTCGCGCAGGGTCTTGAGGGCGCCGCTGTCCA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACGGCCCGCCTTCGGGTGGGCCGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-18.20,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [31.7-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA // Array 1 166-562 **** Predicted by CRISPRDetect 2.4 *** >NZ_PYSV01000005.1 Deinococcus arcticus strain OD32 contig5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 166 37 100.0 36 ..................................... CCGGCGCCACCCGTGCCTGCTGCCGCGACCGCCGCT 239 37 100.0 35 ..................................... GTAACCGTCTGCACCGTGGGGGAGGGGAGGGTGGG 311 37 100.0 33 ..................................... ACCGCGCACTGTCCAGCGCCGCCCGCAGGCCAT 381 37 100.0 35 ..................................... CACTGTGAGGGTCAGCAGCCGGTTTCCGCTGCCCC 453 37 100.0 36 ..................................... TGGAAGCAGGCCCTCCGGGAACAGGAGATGGCCGAG 526 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ==================================== ================== 6 37 100.0 37 GTCACAGCCCGCCTTCGGGTGGGCTGAGGATTGAAAC # Left flank : GGTGGTCGAATTCTGTAGGACTCAGCCCGACCAGCCGCTCAAAGGAACGTGCTCTGGACGTCAACTTCTCCAGCCGCAACACGCCTCAAGCTACCCACTTCCACTCCTACTGCGCAACAGGTCTTGAAACCTGCATACAGTCCTCCAGGTCCTCCAGATGGCCGGG # Right flank : CCTGACGGCGGCTGAGGTTACCGACGTCTGCCGCTGTCAATGCCTCTCACAGCCGGGTTCGAATCTCCCACAGCTCCGGGAAGAGCACCGTGTCCAGGGCGCGGCGCAGGTAGGCGGCCCCGCTCGTGCCGCCTGACCCCCGCTTAAAGCCAATCGTGCGCTCCACGGTGGTCATGTGGTTAAAGCGCCAGCGGCGAAAATTGTCTTCCACGTCCAGCAGCTTCTCGGCCAGTTCGTACAGGTCCCAGTAATGCGCGGGGTCGCGGTACACCTGCAGCCACGCGGCCAGGACGTCCTCGTTCAGGACGGGCGGCTGACTCAGGTCGCGGTTCAGGACCGCCTGGGGGATGGACAGGCCACGCGCGGCGACCAGGCGCAGAGTCAGGTCGTACACGCTGGGGGCCTGCATGGCCTCCTGCAGGGGCCCATGCAGGTCGGGGCGGTGCTCGTGCGGCCGCAGCAGGGCCTCAAAGCGGTTGCCCAGCAGAAATTCCACCATG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACAGCCCGCCTTCGGGTGGGCTGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-15.90,-11.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [41.7-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : NA // Array 2 54222-50230 **** Predicted by CRISPRDetect 2.4 *** >NZ_PYSV01000005.1 Deinococcus arcticus strain OD32 contig5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 54221 29 100.0 32 ............................. AACGGTCTTGGTGTCAATCTTCTTCTCTGGTG 54160 29 100.0 32 ............................. CGCAGGGGAGAACATACGCGCCGGATAACCCG 54099 29 100.0 32 ............................. TTGCTTGGCGATACCCAGGCGAATCAGCACCG 54038 29 100.0 32 ............................. ACATGATCTGACTTTGTTAGATCATGTCTCCG 53977 29 100.0 32 ............................. CTGCGCTTGACGCCGTCGATCAGGACCCGGTG 53916 29 100.0 32 ............................. CCGTGGGTCGCCCAGGCGTAGCCCCCGGCGTC 53855 29 100.0 32 ............................. GCCTGACCGTCAGCCCGCTCGACCCGCAGGAG 53794 29 100.0 32 ............................. TGCTACAGATCCTGACCCCGCCCGCCGATGAT 53733 29 100.0 32 ............................. CGTCCACCCAGGAAGTGCGCTCAGCAAGCTCC 53672 29 100.0 32 ............................. GGCCAGCTCGGCGGCTTTGATATCGCGGGCAT 53611 29 100.0 32 ............................. GGTGGTGCAACAACAAAGATCAACATCAATAT 53550 29 100.0 32 ............................. GAACGTATGCCGGGTTTCGCTACCCTTATGGG 53489 29 100.0 32 ............................. GCGCAGGGGCACCCAGTCACAGGCCACACCGT 53428 29 100.0 29 ............................. CCCATTCCTGGCCTGCCTGCTGAGACTGC 53370 29 100.0 32 ............................. GTGGAGACCCCCACCCAGCCCGCCCCCGAGCC 53309 29 100.0 32 ............................. CACCCAGCCCCAACACTCACCCGCCACGGGGG 53248 29 100.0 32 ............................. CGGACCCTCTCCCTGAAGTGGTCTGATGCGCT 53187 29 100.0 32 ............................. CACCCCCGCACCCTGAAACACGAGAAACACAA 53126 29 100.0 32 ............................. CGCTGCGCGAGCGCCAGATTCCCAAAGCGCTC 53065 29 100.0 32 ............................. GACACCCATGACCCTCACTGACGCTCAGCGCA 53004 29 100.0 32 ............................. CGTTGACCAGACCGCTGACCACGCCACCGAAC 52943 29 100.0 32 ............................. ACCTATGCCGAGACTGGCCGCTACCAGGGCCA 52882 29 100.0 32 ............................. CACTCGCCCTTCTTGAGGGCCCGGCTGGCCTG 52821 29 100.0 32 ............................. GGAGACTGGGCCAAAGGCGGAGTCTCGGTGCA 52760 29 100.0 32 ............................. CCGGCCGAGCGCGCCACGTTGATCGCGGTGGT 52699 29 100.0 32 ............................. CTGGGCAGCAGGTCCGGCCAGCTTGGCGCGGT 52638 29 100.0 32 ............................. CTGGGCAGCAGGTCCGGCCAGCTTGGCGCGGT 52577 29 100.0 32 ............................. TCCGCCGGGCTGATGTAGGTGCTCCCAGGCGC 52516 29 100.0 32 ............................. ACCTCCTGTTCGGTCACGACAAACGGCGCGTC 52455 29 100.0 32 ............................. AGGTTGTCGGCGTCGGCGCGGCTGAGGGTGCC 52394 29 100.0 32 ............................. TTCGGCGCGCGAGACTATGTGAGCAAACTCTG 52333 29 100.0 32 ............................. CACTCCTCGGCGCGGCCCTGGACGGCATCACC 52272 29 100.0 32 ............................. AAGGCCCGGAGCCTGCACCACGCCTCCCTGCG 52211 29 100.0 32 ............................. TAAAACCTTCCCCAGAAAAAGCCGCCGCCCTG 52150 29 100.0 32 ............................. TGAGGAGGTGGACCGTGCTATTGCAGAACGTG 52089 29 100.0 32 ............................. CCGTGCTGGTGCAGCAGCCCCCAGATGCCGGC 52028 29 100.0 32 ............................. GTGCGCCGTGGCCCATGAACTCGCCACCCTCG 51967 29 96.6 32 ............................T CTTCCAGGCTCTCGGCCGACTGCCGGTAGGCC 51906 29 100.0 32 ............................. TCAGCGCAGGCGGTGTGAGGCGGCTGAAAATG 51845 29 100.0 32 ............................. GAAGCGGCCATGGCCTCGCGCTTCGTGGCCTC 51784 29 100.0 32 ............................. TGGGTGCTGATTGCGGAGCTGGCCCGCATGTT 51723 29 100.0 32 ............................. GAGCGCGAATACGACTATTACGGCCTGCGTTG 51662 29 100.0 32 ............................. GTGCCCCAGGCGGACCTGAGCGCCTACGCCTT 51601 29 100.0 32 ............................. GCAGCAGCAGACGGCGCGAACCTCACGCCTAT 51540 29 100.0 32 ............................. GGAGGCAGAACAGGGCCACCAGCTGCTCGATC 51479 29 100.0 32 ............................. GCCTTGAGTACGCTGCGAGAGTTGCACAAGCC 51418 29 100.0 32 ............................. GCTGGCCCTGCGCGCCGGCCTGGAAGTGGTGG 51357 29 100.0 32 ............................. CAGCACTGCTAGCTTCTGCTCAGCTTGAGCTT 51296 29 100.0 33 ............................. GGCCAGTTGGAGCGCCAGGCCCGTCTGGATGCC 51234 29 100.0 32 ............................. CAGGGCCGGGCGGGCGCGTCGCGCTCGCCCTG 51173 29 100.0 32 ............................. ACCTGTTTGATCTGCCATAGAGCGCGATTGAC 51112 29 100.0 32 ............................. CCTGTGCGTCAATAACGCGCTTGTCGGAGCTT 51051 29 100.0 32 ............................. ACTGCATGCCCAACTGCTTCCGCGAGGCTGGC 50990 29 100.0 32 ............................. GCGTGGCCGCTGGGCTTGGTGATTGTAAACAC 50929 29 100.0 32 ............................. TCGTAGAAGCTGGCGTTCGTGGGGTTGAACAG 50868 29 100.0 32 ............................. TCGCCGCGCTCCATGGCGTGCAGCGCGTCGCC 50807 29 100.0 32 ............................. CACCGGCACCACGGCCCGCAGCACGTCCTCAA 50746 29 100.0 32 ............................. GTCACAGCCCGCCGCCTGCAGGGTCAGCAGCA 50685 29 96.6 32 ...C......................... GTTGAACTACTCGACGGCTACGTTTATGACGA 50624 29 100.0 32 ............................. TTATTCCCGGCGTCATAACACACCACGTCATC 50563 29 100.0 32 ............................. TGCGCCTCTTTGAAACCCACGGTGGGCACCGT 50502 29 100.0 32 ............................. GCGCGCAGCGCGGCGGCCACCCCGGAGACACG 50441 29 100.0 32 ............................. TCCTGGGCGGCACTGTGCAGGTCGGTCACGTC 50380 29 100.0 32 ............................. GCGAACTGTTCCACGATGATGCCCTCGGCCGC 50319 29 100.0 32 ............................. GCCAACATCGAGCGCACCGTGACCCCGCTGGG 50258 29 96.6 0 ..........................T.. | ========== ====== ====== ====== ============================= ================================= ================== 66 29 99.8 32 GTTTTCCCCGTGCAGGCGGGGATGTTCCG # Left flank : TCCTGACCCTGCTGGACGACCGCCACGCCACGGACCCCGAAGACGACGACGTGGGCGAGCTGTGGGACCCGGAAGGGAACGTGCAGGGAGGCATCAACCATGATCGTGATGACCCTTGAACGGGTGCCGCCCAGCCTGCGCGGCGAGCTGACGCGGTGGCTCATCGAGGTCCACACAGGCGTATATGTGGGCAACGTCAGCGCCACCGTCCGCGACCTGCTGTGGGACAAGGCCGTTCAGCACGCCCGCGCGGGCCGCTGCACCCAGATGTTTCGCAGCGCCAATGAGCAGGGCTTTGCAATCCGCATGCACGGCGAGGGGCGGCGCACGCTGGTGGACCTGGAAGGCTACGCCCTCGTGGCCGTCAAGGACGCACGGTATGACACACTGAAAGCGGAGCATGGCCTCTCCGAGGAGCTTGAAACTTTGTAAGGTGTATCACCCTGGGGTGAAGGGACCTCAGGGGACAGGACGGTGGGTTCAGCGCGTCGTTTGAGAGT # Right flank : TCAGCGAGCGACCAGCGAATTTTGCCCGTGTGGGTGAAGATGAGGACCATCTCCACCCCTTTACAGGATGAAATGACATACGACCAGTCTGTCTCAGAGAAACATCACTGACTGGTCGGCCAGTGTTGTGGTTAAGGAGTGTGCAGAAAGTAGCGGGCTAAGGTGCCTTACGGCAGGCGCAGCGGCCGGCCGCTCACCAGCAGCCACACCTCGTCACTGGCGGCTGCTGCCCGCTGATTCACCCAGCCCAGCAGATCGCGGTAACGCCGCGCCAGGGCATTCTCCGGCACGATGCCAAAGCCCACCTCGTTCGTGACCAGCACGGTCAGCCCACCCCGGGCCTGGGCAGCGGCCAGCAGGGCGTCTGCAGCGCTCAGCACCGCCTCGTCGGGCCAGCCCGCCAGCATCAGGTTGCTCACCCACAGGCTCAGGCAGTCCAGCACCGCGGCGGGCGTCGGGAAGGCGGCCAGTGCCCGGGCCACCTCCAGGGGCTCTTCCAC # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCCCCGTGCAGGCGGGGATGTTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.50,-11.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 3 67608-74469 **** Predicted by CRISPRDetect 2.4 *** >NZ_PYSV01000005.1 Deinococcus arcticus strain OD32 contig5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 67608 29 100.0 32 ............................. ATTGTGCTTGAGCCATCCCTGGGCCTGGGCCC 67669 29 100.0 33 ............................. CGCGCCAGGGCCTGGACCTGCTGGGGGGTGGGC 67731 29 100.0 32 ............................. CGGGCGCCGAAGGTCATGGGCGCGCTCAGGAC 67792 29 100.0 32 ............................. GTCTGCGGCGCGGCGGCGGTGGGCACGGCCAC 67853 29 100.0 32 ............................. ACGACCCCGCGCACTTCGCGGTCTGGGGCCAG 67914 29 100.0 32 ............................. TGGTCCTCTGCCTGATCGCACAGGGCAGGTTA 67975 29 100.0 32 ............................. TCGAAGTTGGCGGCCAGCCCCTGGTAGCTGTC 68036 29 96.6 32 ............................T TTGGCCTTGGCCTTCGCCAGCAGCGCGGGGTC 68097 29 100.0 32 ............................. TTCTGCCGACAGGTACTCAACTACTTTGGGGT 68158 29 100.0 32 ............................. CACGCGGCGTTATCGCACTGGAGTGCGAAGAG 68219 29 100.0 32 ............................. CAGCTTGTTGCGCTGGGCCAGCCCCTCGCGGG 68280 29 100.0 32 ............................. CCTTTGCCCTGAAGCGCAACCGTCTGATCGTG 68341 29 100.0 32 ............................. GGGTGCACGGCGTGCCCGAGGGCCTCAGGCCC 68402 29 100.0 32 ............................. GGCCGCTCGCGGTGATTGACCTGCTCGATATA 68463 29 100.0 32 ............................. CGCAGTGGCGTGAACGCCGGGCTGAGCTGGAC 68524 29 100.0 32 ............................. AGAGCGGCCCCCGGGCGGCAGCAGCCCTTGAA 68585 29 100.0 32 ............................. CACGGCCAGCATGAACTGCAGGTCATCCAGGC 68646 29 96.6 32 ............................T GTCCAGCGCTTCTTCTGCGGTCGCCAGCCGGG 68707 29 100.0 32 ............................. TGCGGCCACCTCGGCCTGCAACTCCTGCAGGC 68768 29 100.0 32 ............................. GTGGATTTGGGTTGATGCCAGTCAGAGCCAAA 68829 29 100.0 32 ............................. AGTTTCATGGCGCTCCTTTAGTCGATGCGGTA 68890 29 100.0 32 ............................. GACATTGCCCTGGCCCACTGGCTGACGAGTGA 68951 29 100.0 32 ............................. ACGACCGGCAGGCGCCCGGCCGCGTGGCCCTG 69012 29 100.0 32 ............................. CGTGACGCGCGCTGTCTACGCCGCCCGCGCCG 69073 29 100.0 32 ............................. AACGCCCGTCGGCAACGCCTGCGCAGATTGCC 69134 29 100.0 32 ............................. CTGACACCGCCGAGAGCATGGCGACGGCGGAA 69195 29 100.0 32 ............................. CCACACCTGTACCCGGCAGCACCTACAGCGGC 69256 29 100.0 32 ............................. TCCTCGCGGATGTGCGTGCGCTCAGCCTGCAC 69317 29 100.0 32 ............................. ACCGTGGCCAAGATTCAGGAGTACCTGAATCC 69378 29 100.0 32 ............................. GGGAACTGGCCACCGCCATGAGCGGCTGGCTC 69439 29 100.0 32 ............................. ACCGGCGTGCCGGGCAGTTCGGTAGCCACCGG 69500 29 100.0 32 ............................. CGTCAGGTCGTGAAGGCCGCGCAGCTGATCAA 69561 29 100.0 32 ............................. AAAGAGATTGCGCGCAACCTGCATTTTGATGC 69622 29 96.6 32 ............................T ACGGACATGGACCCAGAAAGGTTCCGACTTGA 69683 29 100.0 32 ............................. GGAATCACTTTGTCAATCATGTCTCACCTCCT 69744 29 100.0 32 ............................. TGGCGAACCACATAGGCCGTTCCCTGATATAC 69805 29 100.0 32 ............................. GTGCTGCCGGGCGTTGTACTTCACGCTGCCGT 69866 29 100.0 32 ............................. CGAACACCGCATCTTCACTGTCAGCCAGCAGG 69927 29 100.0 32 ............................. ACCACATGATGCGCCTCGCCCTGCAGATGCGC 69988 29 100.0 32 ............................. GGCTGATGATTCTTCAGAGGCAGACCCGCGAT 70049 29 100.0 32 ............................. GTGGTAGCGCGGGTATCGAGCCTGCCAGTAGG 70110 29 100.0 32 ............................. CGACGCCGGGGGCCTTCCATCCCCGCCTGAAA 70171 29 100.0 32 ............................. GCTCTGATGGTCAACCTGGGAGCTGCGTTCGC 70232 29 100.0 32 ............................. GCGCGCGCCATGTTTACCACCCGCCAGCGGAA 70293 29 100.0 32 ............................. CCCCTCAGCTGTTCTCTGAGGGGCAATCGGGG 70354 29 100.0 32 ............................. GTCTGAAACGCATAGTCCAGCCATTTGGCTGG 70415 29 100.0 32 ............................. GTCCTCTTTGTTGCCGTTCGTGGCGGTCATCA 70476 29 100.0 32 ............................. CGGGCCGCTACGTGGGGTCAGCTGGGCGGCGT 70537 29 100.0 32 ............................. CCAGCCCAGCGCCGCACTTCTCACCACCAATG 70598 29 100.0 32 ............................. CTGTACGCCTCGCCGTAGGGTGTGCCCGTTCG 70659 29 100.0 32 ............................. TAGGCGTCTCCCTGCACCCCCGTAAAGGTGGC 70720 29 100.0 32 ............................. GCTGGCATTGCCCGGGCGGCCGGGGCGAAACC 70781 29 100.0 32 ............................. GTGTTGCGGCCCCCGCGCCCGATGTTGTCCCC 70842 29 100.0 32 ............................. GCGTGCTGATTGAGGGCAAAACGTTCCATTGG 70903 29 100.0 32 ............................. CGACTGCAGGCGGCCACGTGGGACGCGGCCCA 70964 29 100.0 32 ............................. GTGTGGATGGGGCAGAAAATCGCGCAGGCCCA 71025 29 100.0 32 ............................. CCCTGTCCGAACTCCTGGCCGGATTGCGTGCC 71086 29 100.0 32 ............................. TGATGTCCTCTGGGGTCCAGCCCGCCGACTTG 71147 29 100.0 32 ............................. TTCCGCGCTCATCGGAGCCTCTTCGCTTTCCA 71208 29 100.0 32 ............................. CCCTGGAAGGCTGCGAATGCCTGCGCCTGCAG 71269 29 100.0 32 ............................. CTCTGGACTTCTAACGATTTCACGGGCAAATA 71330 29 100.0 32 ............................. AGGCCAATATTCCCCTGCGCGCCGCCGGGCCA 71391 29 100.0 32 ............................. GCGGGCTTCCAGCCCAGGTCCAGGGCGTGTTT 71452 29 100.0 32 ............................. GAACGGCGCCTTGACCTAGGACTGAATCGTCC 71513 29 100.0 32 ............................. TGTGTAGCCTAGTGAGCCCACTTCTGCTCTGT 71574 29 100.0 32 ............................. GCCGCCTCGAACGTGTCGCGCAGCTCGGGGGG 71635 29 100.0 32 ............................. TCCTGCACGGCCAGCCGGCGGTCGGTGGCCAC 71696 29 100.0 32 ............................. GCCGCTGGGCTGAGGGTTTGCAGGCTGGGCGG 71757 29 100.0 32 ............................. GGGGCCTCCTGGGGCTAGGGGTCGTCGGGGGC 71818 29 100.0 32 ............................. GGGGGGCGCCAGATGATGAGGGTGCCCAGGCT 71879 29 100.0 32 ............................. GCCGCGAATTCCTGGGGGTTTTCGACGATTAC 71940 29 100.0 32 ............................. GCCTGGGCGGCCTGCTGGTCCACATCATGCTT 72001 29 100.0 32 ............................. GGCGCCGGCCGCCAGCTGGTGACCTGGGGGGA 72062 29 100.0 32 ............................. AACAGATGGTGCGCGCCATGCGCCAGGGCGGC 72123 29 100.0 32 ............................. CGGGCGCAGCAACTTGGGGAACAGCGGGCCGG 72184 29 100.0 32 ............................. CCGCCCAGGAGGCCCGTGAGCGCGGCAGCACA 72245 29 100.0 32 ............................. CCGATTCCGGCCGATGGCCCGGTGACCTTCAG 72306 29 100.0 32 ............................. CTGACTCTGAACTTCAAAGAGATCGTGGCCAA 72367 29 100.0 32 ............................. AACCTGCAGGACCGGGCAGCAGTCAGCCGCAC 72428 29 100.0 32 ............................. ATGCTGGGTAACGCAGGCGGCAACCTTGCCGC 72489 29 100.0 32 ............................. CCCCTGCCCACAGGCGGCGCAGGCGGAAAAGC 72550 29 100.0 32 ............................. GTGGCCGGCGAACTGGGCATTGACCCCAACGC 72611 29 100.0 32 ............................. AGCGCCCATTTGGTGGGATACAGGCTGTCGGC 72672 29 100.0 32 ............................. CGGTAACCTACCGTCAGAGCAAACTCGGGCAG 72733 29 96.6 32 ............................T CTTGCGAGAGTTTCCAGCCCGTCGTCTTGTAC 72794 29 100.0 32 ............................. CCCACGGGGTCGCGCTTGAGCGATTTGTTGAG 72855 29 100.0 32 ............................. CTGATCATGGAAAACGAGTGTCTGACCATTCC 72916 29 100.0 32 ............................. GACGCGCCACCGGAGCAACCGCACCGGAGCGC 72977 29 100.0 32 ............................. GTGTAGGGGCTGACCTCGCCGTGGCCGTCGTC 73038 29 100.0 32 ............................. TGGGTGCTGCTGATCCGAACCGCCATGGGCCG 73099 29 100.0 32 ............................. AGCTGCTGGAGGGCTATGCACAGGACACGGAG 73160 29 100.0 32 ............................. GGTGACGACGCCCGGCGCGGGACCAGCTGCAT 73221 29 100.0 32 ............................. CCCGCCAACGTAATGGTGCGCTGGCCGGACGG 73282 29 100.0 32 ............................. GGCCCGGCCGGTGGGCGCACCGCCACCCCTGG 73343 29 100.0 32 ............................. AACAGTGCGACCAACGCCTTCCTCTTTTACCA 73404 29 100.0 32 ............................. CTCAGATTGACCATGTGGGCGCGTCCGGTTTC 73465 29 100.0 32 ............................. AGCAACAGTGGATGCGTCTACCCCGCAGAGCA 73526 29 100.0 32 ............................. CGTTCCTGACCAGCCTCGCCATGCACTACGGG 73587 29 100.0 32 ............................. GTGGGGGCCGGATCAAGTGCAGCCGCGTGGAA 73648 29 100.0 32 ............................. GCACTGGCGGCCGTGCAGCTGGTCCGGCAGAA 73709 29 100.0 32 ............................. ACCGGCGCCAGCATGGCTTCACCAGTCACGCG 73770 29 100.0 32 ............................. CGGCCAGCGCCAGGGGCCCGGCGATGAACACC 73831 29 100.0 32 ............................. TTGTAGGTCGCGGCGCCGTTGGTGACCCCGCC 73892 29 100.0 32 ............................. GAGTTCACCGTGGCCACGATCAAGCCCCTCAG 73953 29 100.0 32 ............................. CGGTCTGTCTGGCCGCACTACCAGCGGCATTG 74014 29 100.0 32 ............................. CCTGTGGGCGTCGGGCTGACGCCTGGGCTGAC 74075 29 100.0 32 ............................. ATTGCGGCTTGAACTATGGCTCTATCGACAAA 74136 29 100.0 32 ............................. CGGTACTTGAACCCACCCCCCACCGGCGGCCA 74197 29 100.0 32 ............................. CTGCCCGGTTCTTCCGGCAGGGCCACGCTGGG 74258 29 100.0 32 ............................. AACCATATGCCTACGGTGGTCGCGGCCCAGGA 74319 29 100.0 32 ............................. ACAACACCAGTCAGGGGCAGATGAGCCCCTTC 74380 29 96.6 32 ............................T TTGTGACGGTTCGCCTCCTTTCGCTGCTGCAC 74441 29 75.9 0 C.C........ACAT.............A | ========== ====== ====== ====== ============================= ================================= ================== 113 29 99.6 32 GTTTTCCCCGTGTGGGCGGGGATGTTCCG # Left flank : GACCGGCGTCCCCCCCTTTGTGTCGTCTCCGGCAACCAGCTGTCCTCCATGGGCCTGCGGCGCTGCGGCGGCAGACAGCGCCGCGGCCCCCAGGCAGAACACGAGCAACACCGAGCGGAACGTAAAGGCAACTTTCGACATGGCAACCCCTGACATGGCCCCGCGTGGGGTCATGGATGGTGAGGGCTTCCGGGCCACGGCGCGCGTACGTCGCAGCGTGGCCCTGGCAAGCCGGGCGGAGAACAGTGGTCAAACCGCCACCTGATCAGGGGAAAGGTGCCGGGTGTGGCCCTCTCTGGCGATGGATTCAGCTTGCTGGGGCCAGGCGTCAAAACGTGACGTCGGTCCGATGCCGCTGCGCCGCCCTCTGGCCGGCGGCGCCTGCGGGCCCTACACTCCGGGCAGGCTCACGCCGGGATGCATGAAAATGTAAGCTGTATCCGCGCCGGCTGGAGGGACTTCAGGCCAGGTGTGGCCTCTAAACGCTGGCGTTCCAGAGT # Right flank : AGTTTGAGCCTTGATCAAGGTTTCGGTGGCCAGTCATGTTTGACTCTGGATGACTTCACGTCTGACCTCGCCGGGCGCAGCGCCTGATTCAAAACACAGCCAGCCGCTTTGGCCTTCACCCTTGCCCTCACGGGAGGCCACTCTGCGTCCTGGAGCACGAGCTGGTGTCGCTCCATTCGCCTCAAAGCCGCCCCGAGGTAATCCTGGGGCGGCTTTGGCTTCTGGCTTTGGGTTTCTGCTCTCAGCCCGGCGCCCCTGCGTGTGGAAAGGCATACAGGTGGCCGCTGCGTAGACCCTGGGCATTCAGGGCCGTGTGGGGCAGGCGGCGCAGAGGCTGGGGCGCGTGGCCCGGGGTCTCCAGTACCAGCGGCGCGCGCAGGAGGCCGTCCGGGGTTACCAGCAGTTCGCCGCGCAGGCCCCGCACGGGCCCGGTGCTCAGGGCGGCGGTCAGGCCCAGGGGGGTCAGGTGGGGCAGCTGGGCCGCGCCGCGCGACAGCCAC # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCCCCGTGTGGGCGGGGATGTTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-11.40,-8.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.64 Confidence: LOW] # Array family : NA //