Array 1 45956-47146 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAANNR010000024.1 Streptomyces sp. KAI-26 NODE_24_length_83726_cov_571.505, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 45956 29 100.0 32 ............................. AGGGCGCCCAGCACCTTGTCCGTCTGGCGCCC 46017 29 100.0 32 ............................. GCCAAGCCGGGCGACATCCTGTTCACCAAGCT 46078 29 100.0 33 ............................. CCGCACACACCTCTATCTGTGACCTGGTCAGAT 46140 29 100.0 32 ............................. CGGGCAACCGGGTACAACCGGGGGGATCAACC 46201 29 100.0 32 ............................. TTCGGCTCGAACGGGAGCTGGTGACGCTGTGG 46262 29 100.0 32 ............................. CGCGTCGTCGACAGCACCGTTGGACGCCTGCA 46323 29 100.0 32 ............................. TCCGCCGGGTCCAGCTTCTCCAGCTCCGCAGC 46384 29 100.0 32 ............................. ACCACACGCGACAAGGCCTGACCCCAGGCCAC 46445 29 96.6 32 ............................T CCGGTGGCGGGCTGCGTGGCCGTCTCGGGGCT 46506 29 100.0 32 ............................. ATGCCGACGGTGTCGGAGTTCTGGATGAGGGC 46567 29 96.6 33 ............................T CACGTTCTGGATCATGATCAGTTCTCTCCCGCA 46629 29 96.6 32 ............................T TTCGCGGTGATGCTCCGAGACCTGAAGGCGGC 46690 29 100.0 32 ............................. TTCACGAGGCAGTCACAGCCGGGATGGATCGG 46751 29 100.0 32 ............................. AGCCAGACGGTGCGCAGGTTGTCGGGGTCACG 46812 29 100.0 32 ............................. TCGTTCATGGCGTCCATCCGGGTCATGCCGGA 46873 29 100.0 32 ............................. GTGTACCTGCGGGTGGTGTGGGATGTGGAGCT 46934 29 100.0 32 ............................. GTCTCTAGGCAGGAGCACCGGGTGCCTCCTGC 46995 29 100.0 32 ............................. ATCTCGATCAGGAGGGGCAGGGACGTGCCGGG 47056 29 96.6 32 ............................T GCCTCCAGGGCATACGTAGGAACCGCGCAAGT 47117 29 86.2 0 ..C..................AC.....G | A [47142] ========== ====== ====== ====== ============================= ================================= ================== 20 29 98.6 32 GTGGTCCCCGCGCACGCGGGGGTGTTCCC # Left flank : GCGGCCATCGACTCCCCCGTGCGCTTCCTCCGCCACCGTCTGACGACCAAGACCCCACCCCAACTCCCCACCGAAAACACCGGATCGGGCACCACTGCCGCCACCGCCCGCAGCCTCCTCGTCGAATGCACGGAGTGCGGCACCCCGGGACCCCCCGAAGCCCTCCCCGACGGCCTCTGCCGCCCCTGCCGCGAAACCCACAGCAACGGGGCCGTGGACCCGTCACCCGCACCCACCGAGGCACCGGACATCAAGGCCCGCATGGCCAACCTCCGGAACCTCCTCAGAAGCGTCTGAGGCAGGCGACGGCGGTTCAGCATCGATTTGGGCGGCCTCTTATCCGGGAAACGAGCCGCCAGCCTCGGCCAACAGGGGCAGAATCTCCCCAGGCAGGCCCCGAGTCCGGAAACGGCCGTCTGCACGGCGAGGGAGATATGTCCGTTTCTCAAGAAGTAAGTAAAAACGAGCCTCACGCCGCATAAAACCGCAGGTCACGAACT # Right flank : GCCTCCGTGGTCGATCCCCCACCGGGCAGTCGGCGCACAGGAACCCTGCTTGTCCGGGCAGTCCGCGAGGTCCGCTGAGTCCGGGCTACAGCGCCTCGCCGGGAATCGACAGATAGGCCTCGCGGAGGCGGCCCAGCAGCGGGTGCTCGGCGGCGAACCCGGTCCCGTCGATGGCCGCCAGGGGGCGGACGCCGATGCCCGCGTTCGTCGCGAAAGCGGCCACCATCACGCGGGCGTCCTCCAACGTCAGGTCCGCGTCGCGGTGTTGGGCGGGCGGCGTCGGGTGCTCGCGCAGCAGGGCCATGGTGACGCCGGGCAGTACGCCGGATCGTGGCCACAGCACGGTGCCGTCCCGGTCGATGAGGCCCACGTTCCAGGTGGCGCCCTCGGTCACGTACCCGTCGCGGCCCACGAACAGCGCGTCGTCGTAACCGGCGAGCTGCGCCGCGCGCCGGGCGTGCAGGGCGCCGAACAGCCCGGTGTGCTTGACCTGGGAGAGG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGGTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 127109-126287 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAANNR010000010.1 Streptomyces sp. KAI-26 NODE_10_length_302916_cov_535.824, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 127108 29 100.0 32 ............................. GTGATCCAGTCGATCACGTTCAACGACACCAC 127047 29 100.0 32 ............................. GCGTGGCTCAGCGGCACCTCTTCGACGACCTT 126986 29 100.0 32 ............................. TCGTCGTCCTCGTACTCCTTCTTCCGGCGCTT 126925 29 100.0 32 ............................. CGGCATGTGAGCGCCCCCAGTTCCGGGATGGC 126864 29 100.0 32 ............................. ACCGCGAGCCCGGTGATCAGGGCCCGGTCGAC 126803 29 100.0 32 ............................. GGTGAGGAACACGAACCCGCCGAGAACGGCGA 126742 29 100.0 32 ............................. GCTTCTGGCCGAAGGTTGAAGTCACCGGGTTC 126681 29 100.0 32 ............................. AACGCCTGGGATGTGGAAGACCTGATCGCGGT 126620 29 96.6 32 ............................T TTGGCCCGCCGCGTGAATCTATCCACGGTCTC 126559 29 100.0 32 ............................. AAAGGGGGCACTGCCAGCAGTTCGTCCAGGCG 126498 29 100.0 32 ............................. GCCTACGAGTGGGACGCGTTCTGCCTGGGCAA 126437 29 100.0 32 ............................. CACACGGCCCTGGTCCCGCAGCCACTGGTGCA 126376 29 100.0 32 ............................. GCGTACGCCAGGATCGGCGCACCCCGCTCCTT 126315 29 96.6 0 .........................C... | ========== ====== ====== ====== ============================= ================================ ================== 14 29 99.5 32 GTGGTCCCCGCGCACGCGGGGATGGTCCC # Left flank : ACCACCGCGCTCACGGCAGGCCTCCCGGCCGAGATCAACTCCCCGGTGGGCTTCCTCCGCCGCCGCCTAACCACCAAGCTCCCACCCCACCTGCCCCCGGCGACCACCACTCGCCCCACCCCGGCCGCCCCCACCGCCCGCGTCCTGGTCGAATGCACGGAATGCGGCACCCCCGGCCCGCCCCAGGCCCTCCCCGACGGCCTCTGCCGCCCCTGCCGCGAAACCTGCGCCACCGGTCCCGGAAACCCGTCACCCGTCCTGACCGCACCACCGGACATCAAGACCCACATGGCCAACCTCCGCAACCTCCTCAAGCCCGTCTGAACCCGACGGCACCCTATTCAGAGGAACGGGCATCGGCCTTGGCGACCGAGGGGCAGAATCACTTCCGGCAGGCGACCGGTCCGCCAACAACGATCAGAACGGCGGGGGATATGTCCGTTTCTCAAGAAGTAAGTAAAAACAGCACCCCGGCCGGATAAACCCGCAGGTCACGAACT # Right flank : CCGGCATACGTCGAGGTGGGACGGAAGGTCGTGTGGTCCCCGCGCGCGGGGCCCCACCCGATCCGGCTCTCCGCCACTGCCTGCCTCCGCCGGATTCGCGGTGGCCGGGCCTTCACCGTCGGCCTCTCGACGGTGAAGGCCCGGCAAGTGGGTACGGTTGAACGGCAGTCGGCCGGCCAGGCCGGCCGGCCCGAAAGGTGAGCGAGCTAGAGGAACCGCCCCGTTCGCGGTGCTCGTCGTCGCCTTCGTCCAGTGCCCGTGCCGGTCACGCCTTCGTGAGATATTCCAAGAGACGGAAGTTGGCGTTGCTGCCGTTGCTGACGAACTCCAGGACACCCAGCTCGGTGCGGATGAGACCGGCCTCCTCCTCCAACTCGGCCAGCTTGTCCCAGTCGCCGGAGTCGTTGAAGCCGAGGAAGAGCCGACCGCCGTCGGTCAGGTGCCGGGGGCCGTCCACGAGGAAGGAGCGGTGGGAGACGTAGCCGGCGTCCATGATGGCC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [23.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 129049-128715 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAANNR010000010.1 Streptomyces sp. KAI-26 NODE_10_length_302916_cov_535.824, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 129048 30 100.0 31 .............................. TCTTGGCCTGGTTCATCTTCGCGGTGAGCTG 128987 30 100.0 31 .............................. CGTTCCTCGCCTGCGCCGTCGCCGTCGCGTC 128926 30 93.3 31 ...T.........................G CCCGCATAACGCCAGCACCTTGACTTGGCGC 128865 30 96.7 31 .............................T TCGCCACGGCGTGTCCGGCCGGGGTGAACTT 128804 30 96.7 31 .............................G GGACGCTGCTGGTCTACGACGAGATGCTGAC 128743 29 86.7 0 ......................CA-....C | ========== ====== ====== ====== ============================== =============================== ================== 6 30 95.6 31 GTGGTCCCCGCGCACGCGGGGGTGGTCCCA # Left flank : TGCCAGAGGAGGAAATCGCCATCAAACTTGCCGGATTGCCCGGCTGGGCACGAGAAGGGGACGCGATCACCCGCACGTTTGGGATCCGCTACCACGGCGGCGTCACGATGATCGTGAACGTCGCGGACGTCGAACGGCTCATCGGCCACCACGCGGACATCGACCTGCGCTGGGACCACGTGAGGTTCCGCATCACGACACACGACGCCGGACACCGCCTCACCACCGCCGACTTCGACCTGGCCGCCCGGATCGACCGCATCGCGACGGCACACGAAGCGCAACCGCACAACTCTTGATCACGGCACCCGCGTTGTACCCGCAATGTTCGGTGAACGGCCTTTCGGCGGTGAAGATGAGGCACTCTGGGCGTGCGGCCGGGAGAAGCCCCGTCCGCCGCATTCAGCCTCGGGACATATGCAGAGAAAGGGGATATTTCCGTTTCTCTGGAAGCAAGTAAAAACATCCCCTCAGCCACCTAAACCCGCAGGTCACGAACT # Right flank : GCCTTGACCGTCTCTCGGGTCTCAAGCTTCGGGTTTCGAGGACGGTTCGTTCACTCTTTCTCGGGTACGGGTACGGGGCCCGGCCCGAAGCTTGGGCTCCGAGACCCGGGCGTCGGGACACGAGGCCCGGGATTCGAGCGCCTTCTTTAACCGGCAGGTAAGAGAAGGGGTTTGGGAAGACCTTCCGACCTCCCCACCCAGGTCACAGCTGGGGAAGTATGACTAATGGTGACGGCTTGCGGCGGGGTGTCACGAGTGCTTACGGTTCGAGAACTAAGCGACCCCGACAGGTGTTGGAAGCACCAGGCCGGGGTCTAACCGCAAGATCGCTAACGATGAAGGACGATCCCGTGGCTACCCAGCACATTAGCTCTGCCCTGCAACCCCCCGCACTCTCCGACGCGTACCCCATGGCGAATCCGGGCTACGGAAAGCGCTCAGCTCCGGACCAACTGCCCCGCAGCGCAAGGGATTTCGCCTTACTACCGGCGCGTGAGCGG # Questionable array : NO Score: 5.73 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGGTGGTCCCA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGGTGGTCCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.50,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 138583-138249 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAANNR010000010.1 Streptomyces sp. KAI-26 NODE_10_length_302916_cov_535.824, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 138582 29 100.0 32 ............................. GTACCGACATGGCTGACACCCGGTGGGTGGAA 138521 29 100.0 32 ............................. GAGCGGCGGTTGCCGACGAACCGGCCCATCCG 138460 29 100.0 32 ............................. TATGACCTCAAGGCCGGTGACCCGGGCACGGT 138399 29 100.0 32 ............................. GCTGTCGGTGTCCGAGCGAGCGGTCATCGCTG 138338 29 100.0 32 ............................. CGGCCACCACCCGGCGTACCGTGACAAACCCG 138277 29 96.6 0 ............................A | ========== ====== ====== ====== ============================= ================================ ================== 6 29 99.4 32 GTGGTCCCCGCGCGTGCGGGGATAGCCCC # Left flank : CACCCCGAGCCTTTCCTCGACCACTACCAACTCCTGCTCCCCAGCGGGTGCTTCACCGAGCCACTGCTCCAGCCGCCCTTCCTCCTCCAGCAGATCCCACTGGTCCTCGTCCAGCAGGTCGGCCAGTTCCCGGTCGGAAGCCTCCTCTTTCATGTACCGCTCGTCGTACTGCTCCAGAAAGCGACGCCACTCCTCGGGCGTGGTCAGGACGTCAGTAACTTCACTGTCTTCAGGCTTGGTTGTCTCATCCATGCGACTCATGCTCGCAGGCGCCTATGACAACGCCCCTACCTCCAGGGCGGCGGACCGGAGGCAGGAGCCGCACCGACTGGGCGTGGCTGGCGCTCCTGTGCCACGCGCAGCACCGAGGAAGGGCAGAATCACTCCTGGGGTATTCGGCTCAAGCAGGGGCCCTTTCCCGAGACCGGAGGGATATGTCCGTTTCTCAAGAAGTAAGCAAAAACAGCCCCTCAGCCACATAAACCCGCAGGCCACGAACT # Right flank : GAAGCTCACAAGGCCCACAGGACCCGCCGTACCCGAATGAAGCCATCGGGCGTCGGCTGACGGCCTGCCATGCCTCCGTGCCGCCCACGACCCGAGCACCGAGCACCGAGCACCGAGCACCGAGCACCGAGCACCGAGCACCGAGCACACGTAACGCCGTCCTCCTCCGACTCGTTGTCGCGAGAGGCGAGAGACATGGGTGGTCGACGCCCGCGGAGCCCAGGAGGCTTGGGAATCATGATCGAAGAGGGCGGCCCCGGGGGATGCCCGGCATCGCGGGAGGAGCCGCGCGTCGCGCACTCCCGTACGCTGCGGTTCTGGCTCGATCCGGCGAATATCGCGGTGCGCCTCGGCCAAGCAGGCCCCGTCGCCCGGACGAAGGCCGGACCGGCGGTCGCCTTCCAGGTCAATGACCCGTCGCTGCTCAGAAAAGTCGGCTGCGGGGAGGACACCTTCCAGGCCTGGAGCGCGGACCCGTGCCTTCGGGACTTCACCGGGAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGATAGCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGATGGCCCC with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 13597-13985 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAANNR010000012.1 Streptomyces sp. KAI-26 NODE_12_length_272411_cov_556.95, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 13597 29 100.0 32 ............................. GAGGCGACCTTCGTGACTACCAACCAGCATCT 13658 29 100.0 32 ............................. TCCCGCCGTACGGAGGATCACAGAGCGTGGGC 13719 29 100.0 32 ............................. GAGCAGTCCAAGGCCCGCGTCGCCCTCGACGG 13780 29 100.0 32 ............................. TCACCGGAGAGATCCGGAACATGGCTGTTCGG 13841 29 96.6 31 ..................T.......... GACCCCCCCATGACCGCTCTTCCCGGGCAGC 13901 29 89.7 29 ......................C.GC... CTGACCCGTGAGGGTGCGCGGCGTGGGTG 13959 27 89.7 0 ........--..................A | ========== ====== ====== ====== ============================= ================================ ================== 7 29 96.6 32 GTGGTCCCCGCGCGAGCGGGGGTGTTCCG # Left flank : CCAATTTGGGCGCCCAGGAGGAGGATTCCAGAAGCCAGTTCACCGATCGCCTGTGGTGAACCAGCATCCGGGGGCCCGCCGTACCGACCCGTCCTGTCTCCGGGCGCGGCGGGGAAATCGGGCGCTTCGGCGGAGGCGGGGTCTTCGGCGGGTGGTCCGGGGCGTGATCCGACACATTGGCTCCAGGGGCGGCGGGGCGCCCATCGTATGGCCGCTCATCACGGCTCTTGCCCCCGATGAGCCGCCCCTTCACCCGTACAGATGGGGCTCCCCGTACAACTTGACGCGATTTTGCGCCAGGTTTAGCAGGCAGGAGGGGACGCGGGGGACGTAGGCGCATACCTGCACAGCGCCTTGCGGTATGCCAACGCAAGGCGCTGCCCGTGCAGCAAGACGTTCGCCGTCGCTGACTGTTCCAGCTCTGTCACCATGTCAGGGTGAGGACGGCAGGCATGAGTCAAGAATTGGCAAAGCCCCTATAAACCAGCAGGTCAGGAAGA # Right flank : AACTTCGCCAATGCGCTTAAGGAGCGTTCTGTGCCAGCAGGGCTGTTCGATATCTCGGGTGGCACGGCGACTTCAGGGAGTCGTGCGTGCGGGACGATCGGGGCGTGTGGGCCCGTACTCTGCAGCTGCGCGTGGGATCGCCAGTAGAGACAAGGAGGGGTGCGGGGAGTGGAGGGTGGGGCACCGTGGTCGACGGCCTTGGTTCGACAACCGCTGTCGGCTCATGCCTTCGTGACGCGCGGGTGGCCTGCGGAGATGCCCGAGAGCAGACGAACGCCACCGGCGTTGTCGGAGACGCTGGCGGCGGTGACCAGCACGGCCAGGAGGAGGTGGAGTGTGTCGACGCCGATGTGACGTTCGCGTCCCGCGATCTTCTGCCCGCGTCCAGGCCCTTTCCTCTGCGTTCTGCTCGTCAGGCTGTCGGGGTGGGTTCGAGCAGTTCCCTACGGGCATCGGCCAGGTCACTCGGGTACGGCCACTGTCGGCGAGGCATGATTTCG # Questionable array : NO Score: 6.09 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGAGCGGGGGTGTTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGAGCGGGGGTGTTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.80,-12.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 344377-343739 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAANNR010000006.1 Streptomyces sp. KAI-26 NODE_6_length_391672_cov_617.844, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 344376 29 100.0 32 ............................. GCCCAGATGTCGCCCGGTGAGCGGTCGAACAG 344315 29 100.0 32 ............................. ACGATCCCCTTCCCGCGCTTGTACGAATCCAG 344254 29 100.0 32 ............................. TGGCGGGCCGACTTGGAGCCAGATCCGATCTT 344193 29 100.0 32 ............................. TGCTTCAGCTTGGCCAGCTTCTTCTCCAGGCC 344132 29 100.0 32 ............................. GTCGCCTCCGGGCGCAGCGCCTCCGTGATCAG 344071 29 100.0 32 ............................. ACTGCCAGGTGCCCGATCCCCAGACCGTCCAT 344010 29 100.0 31 ............................. CCCCGTCGTGCAGGTGACCGTGGAGCGCGAA 343950 29 100.0 32 ............................. GCGGCGATGGCCTCGGGGACGGTGAGAGAGAA 343889 29 100.0 32 ............................. GTCGGGGGCACGGGCTGCCGGTGGGCCTGCTC 343828 29 100.0 32 ............................. TCCTACCCGGCCGTCGACTACCGGAAGTTGAT 343767 29 89.7 0 .....................A.AG.... | ========== ====== ====== ====== ============================= ================================ ================== 11 29 99.1 32 GTCGTCCCCGCGCACGCGGGGGTGTTCCC # Left flank : AGAACACCTCGCCCGACACTCCGGCCCCGACCGCCCGCCGCATCCTTATGGAATGCACCGACTGCGGCCGCCCCGGCCAACCAGAAGCCCTCCCCGACGGCCTCTGCCGCCCCTGCCGCGAAGCCCACAGCACGAAGCCCGGTGAACTCCCGGCCCACCCCACTGAAGCCGCCGGCGTCAAGGCCCGCATGAGTAACCTTCGCGACCTGCTCAGAACCGTCTGAGGCTGAAGCCTGCAAGGTCAGTTCGCGCCAGCAGAGAGCGCGGACACGTATCGGGGCACTGGCGCGGCACCCGTTCGCCTTCACAGTTTCCTGGGCAGATGCCGCACGGCCTTCCTTGAGGAAGGGGGCGCCCCCGGGGGTGGTTGGCGGGCAGAATGACCCCTGGCATGCCCAGTCTCGGGTAAGGGCTGGTTGCAACGCGGGAGAGATATGTCCGTTTCTCAAGAAGTAAGCAAAAACAGCCCCTCAGCCACATAAACCCGCACGTCACGAACT # Right flank : GACCGCCCGAAACCGGAAATCGATCATTTTCTGTCGAGTTCGAATCACTTTTGAACAACTGGCCTCTACAGGGCATTTCCGCATGTCAAATGCCCACATGCCCGCGATCGACACGGAACTCCTCACCGCGTTCCGCCACCTCTCCCCCACCGCCCGCACCCCCTGGGGCAAGCACGATCGGCCGACCGAACAGTGGCTCCCCCTGTGGCGGCACATGGCCGACAGTGCAGCCGTGGCAGGCAGGCTCTGGGACGAGTGGGTGCCCGACAACGTGAAGGAGCTGGTCGCGGACGTCTTCCCTCAAGGGGCCGACGACGCACGGCAGGTGGCCGTATACCTCGCCTGTGTGCACGACATCGGCAAGGCCACCCCCGCCTTCGCCTGTCAGGTGGACGGGCTCGCGGACCGGATGCGGGCGGCCGGGCTCGAGATGCCGTATCTGAAGCAGTTCGGGGCGGATCGCAGGATGGCTCCGCACGGGCTGGCCGGGCAACTGCTCG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCGCACGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGTCCCCGCGCACGCGGGGGTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 99715-101331 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAANNR010000007.1 Streptomyces sp. KAI-26 NODE_7_length_367189_cov_616.464, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 99715 29 100.0 32 ............................. CGGCAAGGCCGTCAAGAAGCACATGACGGTCT 99776 29 100.0 32 ............................. GAGCAGTGGCAGCGGCGCGCCGTCCAGGTGCT 99837 29 100.0 32 ............................. CACGCTCCTCTGTGCAGCATTACAGGCCGCCG 99898 29 100.0 32 ............................. TCCCCAGCCTGATCGGCCCCCTGTACCGGTTC 99959 29 100.0 32 ............................. GGCACGAGCATGGTGGGCGCGGCCTGCTTGTT 100020 29 100.0 32 ............................. TCCCGGCCCTCCGTTATTACGACTGCACGTTT 100081 29 100.0 32 ............................. CGGGTCGGGCTGGGGGAGGACGCGATCCGTAA 100142 29 100.0 32 ............................. TTCCTGGACATCGGCACGGACGCGCGGCGCTT 100203 29 100.0 32 ............................. CGGGGGGATCAACCGGACGGATCGGACACGTG 100264 29 100.0 32 ............................. GTTCACCGAGGCCGGGACGCTCACCGTCATCA 100325 29 100.0 32 ............................. GCGGCCCGGGTCAGCCCCGTTTGCATGTGACT 100386 29 100.0 32 ............................. GACGCGGGCCCCGGCTCCCCCTCTCTGCGAGG 100447 29 100.0 32 ............................. GGCGTGACCGAGGAGCGGCCACCAACCCACGG 100508 29 96.6 32 .....................G....... CAGCAACACCCCCCACCGCACCACCCTTCATC 100569 29 96.6 32 .....................G....... CCCGACGGCCGGATGGCGAAGCTCAAGACCGC 100630 29 96.6 32 .....................G....... GGGTGGAACCCGATCGAAGGCGGGGTGGGCGA 100691 29 93.1 32 ...............A.....G....... GACCCGGAACCGGAGATCGTCATCGACGACAC 100752 29 96.6 32 .....................G....... GTCGGCGGCCCGTTCGTCATGGCCGAGCAGCT 100813 29 89.7 32 .............GT......G....... GGGCACGTCGTCCGCGGCTACGACGGGCTGTC 100874 29 89.7 33 .............GT......G....... GACCTCCACCCCAATCTCGTGCAGTTGGAGTGG 100936 29 93.1 32 ...........A.........G....... GGGCACGTCGTCCGCGGCTACGACGGGCTGTC 100997 29 89.7 33 .............GT......G....... GACCTCCACCCCAATCTCGTGCAGTTGGAGTGG 101059 29 93.1 32 ...........A.........G....... TTGAGGGGTACGTCCGCTCCACCCCACGCGGC 101120 29 93.1 32 .....................G..A.... ATCGCGTCGATGCTCGCGACGACCGTTGTGCC 101181 29 93.1 32 .....................G......T GCGACGGGTGCATTTCGCATGGCCGGGGGCCA 101242 29 89.7 32 ............A.T......G....... TAGGTGAGCGGTGGGGTTCGTGGAACGGTCTG 101303 28 82.8 0 ...........A.G.......G.-.C... | A [101330] ========== ====== ====== ====== ============================= ================================= ================== 27 29 96.1 32 GTGGTCCCCGCGCACGCGGGGATGGTCCC # Left flank : ACCACCGCGCTCACGGCAGGCCTCCCGGCCGAGATCAACTCCCCGGTGGGCTTCCTCCGCCGCCGCCTGACCACCAAGCTCCCACCCCACCTGCCCCCGGCGACCACCACTCGCCCCACCCCGGCCGCTCCCGCCGCCCGCGTCCTGGTGGAATGCACGGACTGCGGCACACCGGGCCCCTCCGAGGCCCTTCCTGACGGCCTCTGCCGCCCCTGCCGCGAAACCTGCGCCACCGGGCCCGGCGACCCGTCACCCACCCTGCCCGCACCACCCGATATCAAGACCCACATGGCCAACCTCCGCAACCTCCTCAAGCCCGTCTGAACCGGACGGCCGCCGATTCAGGGGAACGGGTGTCGGCCTTGGTGACCGAGGGGCAGAATCGCCTCTGGCAGGCGAGCAGTCCGCCAACGACGATCAGCATGGCGGGGGATATGTCCGTTTCTCAAGAAGTAAGTAAAAACAGCACCCCGGCCGGATAAACCCGCAGGTCACGAACT # Right flank : CTCAACGAAGCTGGGCTCCTGCCGGTCGCGGCCCTCGGCGGATGGCGGCCGCCGGAGAGTGTCCGGCTGATCATGACGGCCCGCGGAGGGGCGGGCCGTAGCTACCTGGCCACCAGCCGTGACGGTGTGGATACGGCGCCCCGTATCATCCCGCCATGATCATGCTATCTGTTGACCCCGTCTCGCGGAGCTACGCCGATGGCCAGGCAGTGGGGCAGCTTCTGGTTCTCGCCGTTGCTCTGGTCCTTGTCTGGGTCGTCACCCGGACCTGGCGGCGAGGTCCGGCCCCGGACGGTCCGGACGACGTGGAGAGAGCCACCGCCATCGCCGTACGGCGTGGCAACATCGTCCGCGGAGTACTGCTGGCCATAGCCGCCGCCGGGCTGATAGGGATTTTCACCGGCAGGGGATACCAACCTGCCGCAGAGGCGGCCCCCACCGCCCCAAAGCCTGTCGCCCAGTCGCCCTCCGCCACGACGGGGCCTGCGGAGATCAAGCGC # Questionable array : NO Score: 5.79 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.73, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-21] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //