Array 1 62350-61867 **** Predicted by CRISPRDetect 2.4 *** >NZ_LGQY01000104.1 Azospirillum sp. TSO5 Contig27, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 62349 37 100.0 37 ..................................... TGAAAGCGGCGCAGGCGGCTGGCGCGGGTCTGAACAT 62275 37 100.0 41 ..................................... AATCTGTGGCTCTACAACGACTGGTATGTCGACGACAACAA 62197 37 100.0 38 ..................................... GCCGACTACATCAAGCGCCATGGCGACCAGTCCTGGGA 62122 37 100.0 36 ..................................... GACCACGGCGAAGGACGGCACGCCCTCCACGTCGCG 62049 37 100.0 37 ..................................... TTCCCGACCGACGACCGCAACTGGGGTATCCAGCCGA 61975 37 100.0 35 ..................................... ATGCCCATGCCGCCGTCTGTGCCACAGCGGACGTC 61903 36 86.5 0 .............-....T............G..C.T | C [61881] ========== ====== ====== ====== ===================================== ========================================= ================== 7 37 98.1 38 GTCTTCCCGGGCAGAAATGCTCGGGCCTCATTGAAGC # Left flank : ATGCGTGTCGTTGATGTAGCGGGACAGCGATTCGCCGGAATCGGGCGAACGGAGGGCAATGGCGGTGCTCATGTCACATCCTCGTGCAAAGCGATATGACGGGTGCAAGGCCCCCTATCGGCAGGCCCAGGCCTCTCCGGCGGAGCAGGCGGTGATATAGTACAAAATCGGTGCTGAAAGTCAAGCGTGGCGGTCGGGTATATGGGACACGGGTATGGGTTGGAGACGGGCGTGGTCGAGGCCGGTCTGAGGACGATGCTGGCGAGCCCCCTCAACCTGTGCTACCTTTGTTCCGCTGCTCACGTCGCCTTGCGAGCGCTGGGACGCACGCGAATCCCCGTCTACCGCTCGCATCAGGCGATCATATTGATTTCGCGAGGTTCTTTGACAAGGTGAAGAACGAAACGGAACCGGCAAATCCTGACCGACCGGTCAGGAACACGGACCCCTCGCAAACGTGGCGAAGCCACATTGCTTTTCAGTGGCCTGCAGGGTGGCGG # Right flank : ACACACCTGAACCCGGCGTCGTTGCTCTGATCGGGTGTCGCGGCAAACCCCGGGGATGGAGGCGCCGGCCGGCGCTAATTCTGTTGCCCGGCGGGGGTGGGGCGCTTACGGTCGCATGTCGTACCTATTGGATCTTTCCCCACCGGTCCCTTTGCCCAGATGCCGCGTCCCGTGATCCGCCGCCTGATCGATGCCGTGCCGACCGCCGTCCTGCCGATGGCGGCCGGGGTGGGGCTGTCGGCGCTGGTGGCGCCGCAGCCGGATGCCGCCATGGCGCTGCTGCGCGGGCTGGTGGTCACGCTTCTGCTCACCCTTCCGTCGCTGGCGGTCGGCACCGCGCTGGGCACGCTGGCCGGATCCTGGGCGGCGGTGGCGCCGCGGTCGGCCGGCGGGCTGGTCGGGCGGCTGCTGGCCGGGGCTGGGCCGCTGCTGCCGGGCTTCCTGCTTGCCGCCGTCGCGGCGCTCGCGGTGCGGGCGGGGGCGTCGGCGGCGCCGCTGGC # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCGGGCAGAAATGCTCGGGCCTCATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-10.00,-14.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 77752-78088 **** Predicted by CRISPRDetect 2.4 *** >NZ_LGQY01000030.1 Azospirillum sp. TSO5 Contig15, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 77752 37 100.0 42 ..................................... ACGGACGATGAGCGGCTAGAGGCAAAGCGCCGCATTCTGGAC 77831 37 100.0 39 ..................................... GCGGCGTCGCTGTGTGGGGTGGCAGTGGCGATCCCGCCG 77907 37 100.0 35 ..................................... GCCGTGGCCTGGACCGACTTCAGATAGTCGATCAT 77979 37 100.0 36 ..................................... ACCGAAGACTGCCCGCACGGTCGCGGCGCGCTGAAG 78052 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================== ================== 5 37 100.0 38 GCCTTCCCGGGCGGAAACGCCCGGGCCTCATTGAAGC # Left flank : TCGTGACCTACGACATCAGCGATCCAAAGCGCGGGCGGCGGGTGTTCAAGGCGATGGAGGCCTATGGGCGCTGGCTGCAGTTCTCGGTCTTCCAGTGCCGCCTAACCCCGCGCCGCCGCGCGGCACTGGGCGCCCGGCTGGACGGCATCATCAAGCCGAGTGAGGACCACGTCCTGATCATCGACATCGGCCCGGCCGACGCGGTGGACCCGCGCGTGGAAAGCCTGGGCCGCCCCTTCGAGAGCATCAAGCGCGAAGCGGTTGTGGTGTGACGCCCAAGACGCGTGTAAACTGCGGCACTGCCGAATGCCGCGCGAGCGGTCCGGCACACACGAAATCCCGGGACCCGCTCGCACGGCGTCCGACCATTGATTTCGCAGGGTTTTTGACTTTGTGAAGAACGAAAGGTAACCGTGATTAACGGTTCTCAATGGACTTTCCGCGAACCGCTCGAATCAAGGCCGATTTTCGGCGATAAATCAGGAGGGTACAGAGTACCA # Right flank : CCTCGACGCCCGCACGGACGATGCGGTGCTTGACGCTGGCCTCCTCCAGGCGGCGGGCTCCGGAAGATGACTGAGGCAGCGGCGCAGCAACTGATGGCGCTGGGAGCGGCCAACCGCTCGAACTCCAGCAGGTCGATGACATGGTCGCGCCGGCTGCCGGCCGCCTCCGCGCAGATGAGGATACCGCGGCCATTGGTCGGCGATCGCCGCACCCCCAACCCACACTCGCAGTACGAGTTATTTTTTAGAAACATATCGATTTAGGAGATACATTTCGTCACTTGATTCCAAAAAGGCGCCGATCTATAGATTTATGCAGACGCTGAGTTGCCTCCTCTCTCTTTTCGTAAGAACTCGCCAGAGTAAATATAGAAACGTCCCCACTATAAAAGCTATAATCGAATAACAATTAAAAAATACACCGCCATTCGGCCGTCAGACGAGCTTCACAACAGTATTTTCAATTTATTTACAGATCGGGGTGGCTCATGGCAACCATG # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCTTCCCGGGCGGAAACGCCCGGGCCTCATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-18.80,-17.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [46.7-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.01,0 Confidence: HIGH] # Array family : NA //