Array 1 28760-26930 **** Predicted by CRISPRDetect 2.4 *** >NZ_LPQI01000077.1 Enterobacter cloacae subsp. cloacae strain SMART_313 contig5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 28759 28 100.0 33 ............................ AGTTATCCCAAACAAGGCGATTTGGCACCGAGA 28698 28 100.0 32 ............................ TACAGCCTCACCCCGTCAGGGAACGACCAGGC 28638 28 100.0 32 ............................ ACCCCGCACGCTGCGCCGCTCCTTGACCCTCC 28578 28 100.0 32 ............................ AGTAAAAATCATATTTCGTCTGGCGGGAGAAC 28518 28 100.0 32 ............................ GCTGCACCGTATCTACCTCAGCCCCCACCAAA 28458 28 100.0 32 ............................ ATGCTGGAAAGGAAGGCTGGCAGAAATGCAGT 28398 28 100.0 32 ............................ TGAGTCGCGATTCAGTTCTCGGGAGAACATGA 28338 28 100.0 32 ............................ AGCGAGGTGTTCACGTTGGCGTATGCACGCTG 28278 28 100.0 32 ............................ GATAAACAGATGGAGCACCGGTAGCCGGGTGA 28218 28 100.0 32 ............................ AACAATGCCGGAGAGCTTGCTTATGAGGCTAC 28158 28 100.0 33 ............................ CACGCGGCGAGGTGAGTCAGTAATACCGCCGCT 28097 28 100.0 32 ............................ GTGTCAGCCTGGGCGGAAAGTGGCTGTGTGCC 28037 28 100.0 32 ............................ GCGCAGCTCCGGCAACCGGGCGCCGCGCCATC 27977 28 100.0 32 ............................ GGAAGCGCACTCACCAGTTTGATTTAGCGACA 27917 28 100.0 32 ............................ GCAAATACAAGCACCGCTGGAAGTGTGCGCAG 27857 28 100.0 32 ............................ TGACAATATCCAGATGCTTGCCAGCACCTACG 27797 28 100.0 32 ............................ CTGCCCTGACATTGCACCGACCTGCTCAAGGT 27737 28 100.0 32 ............................ ATCGCCGCCGCTTCGAGCCGCTGCGCGACGAG 27677 28 100.0 32 ............................ GTTAGCGGATTCGGCGAGGGGTTACATGTTGC 27617 28 100.0 32 ............................ ACATGCGCCGGTTGCGCGCCGCGGTACCCGAC 27557 28 100.0 32 ............................ TGTACGCCGTCATAACCGCCTGGAAGAGTGGC 27497 28 100.0 32 ............................ ACCGCCCGCGCTGACACGAAGTACGGATTCAC 27437 28 100.0 32 ............................ GTTCTCGCCGCGCGAGTGCAGCGCCTGACGGT 27377 28 96.4 32 .........A.................. AGCGGAAGCCAGTCGGGATAGTCGATAATTGG 27317 28 100.0 32 ............................ TGATTCGTTCCAGTCATATACCACGTTCACTT 27257 28 100.0 32 ............................ TCAGGGACTATCAAGACTTTGGCAATCAAGCT 27197 28 100.0 32 ............................ TTAATTGCAGAGCGAAGCTTACGCGCCGCAGC 27137 28 100.0 32 ............................ TACCATTGTCGCATTCGTGGTTTTGTTAATGG 27077 28 100.0 32 ............................ TGTCATTACTTACGTCGTAGCATGGAGTAACC 27017 28 100.0 32 ............................ GGGCAAAGACAGCTGCGCTAGCTCTGTGCGGA 26957 28 85.7 0 .........T..G..A.T.......... | ========== ====== ====== ====== ============================ ================================= ================== 31 28 99.4 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CGATTGCAAATCCCTCCCACAAACGCAGCCCGTATGCCATATCTGGAGGAAGTGAAAACCGGCCTCACAGAATCAATGCGTGATTTTCAGGTAGTGGAATTTGAGGACGACGCGGAGCAACCGCGACAAAAAGAGTGGTTGCTGGAGGATACCGAAACGAAATGCGACTACTGCCGGGCGTTAAACCATGTGTTGCTGGTGTCGCATGTTGACCGCGATATGTTGCCGCACCTGACGGGACTGCTTCATGACATTACGCATTCAATGGCGGCAGATGTCTTTGCACCTCAACATTCAGAAAAGATAATGCACATTATTTCCTGAGTGCGCTCTGAGGCATCGGGGAAGCTCCTCTGACGCCAATGGTTTAACCCTTTTTTTTGATGTGCACGTAATTCATTGATTTATATGGTTCGGATTTACGTTTCTGAAAAAAAGGTTTTATGCGCAAAAGTTGATTATTTTCTTTTCTAACAATAAGATGGCGTTGTTTCCTTTCA # Right flank : AATGAACAACATCGACAAACAGGCGCTACACGGTTCACTGCCGCACAGGCAGTACAATTAAAACCAATCCTCTGAAAGATTCATCCCACCTATAAAAAGTTAATACTATCAACACCACACTCTCTATTTTTTTACAATAAATAAAAAATAATTCACGAACAAATTATATTCTGGCGAATATATTATTTGTAAAAATAATATTTCAATGCAAAAAAGTAATTCTTCGCTAAATTATCACTGCAATTACTATTCGTTTGATATCCATCACATTTGCTTGTGGCTTATTTTCGATAACATACCGCACATTCAACACATTGAAATAAAAGCCCTCGCCATGTCCGTCAACAGCATTACTCCAACAGATTTAAAAACTATTCTCCATTCTAAGCGCGCCAATATCTATTACCTGGAAAAATGTCGTATTCAGGTGAATGGTGGGCGCGTTGAATATGTCACTCAGGAAGGCAAAGAATCGTTTTACTGGAATATTCCCATCGCCA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //