Array 1 382803-382591 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHHEH010000002.1 Streptomyces sp. COG21 ctg.s1.000002F_arrow, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 382802 29 100.0 32 ............................. AACGTAGCCATGGGGCAACTCTTTAGCGCTAA 382741 29 100.0 32 ............................. AAGCAGGCATCGTCTACCAGCCGCGTCCCCGG 382680 29 96.6 32 ............C................ CTCGTCCGGCTCGTCACCCGGGGCACCGGCAC 382619 29 75.9 0 ............C........CG.ACAG. | ========== ====== ====== ====== ============================= ================================ ================== 4 29 93.1 32 GTGGTCCCCGCGTGAGCGGGGGTGTTCCG # Left flank : TTGGGCGCCCACGAGGATGATTCCAGAAGCCAGTTCACCGATCGCCTGTGGTGCACCAACATCCGGGGGCCCGCCGTACCGACCGGGCCCGTCTCCGGGCGCGGCGGGGAAATCGGGCGCTTCGGCGGAGGCGGGGTCTTCGGCGGATGGTCCGGGGCGTGATCCGACACATTGGCTCCAGGGGCGGCGGGGCGCCCATCGTATGGCCGCTCATCGCGGCCCCTGCCCCCGATGAGCCGCCCCTTCACCCGTACAGATGGGGCTCCCCGTACAACTTGACGCGATTTTGCGCCAGGTTTCCAGCAGGCGGGAGAGGGGGCGCGGCAGACGTAGGAGCTTGCCCGCACAGCACCTTGCGGTACGCCGACGCGAGCCAATGTTCCGTGCGGCAAGACGTTTGCCGTTGCTGGTGGTTGGGGCTCTGGCACCATGTCAGGGCGAGGGCCGCAACCATGAGTCAAGAATCGGCAAAGCCCCTATAAACCAGCAGGTCAGGAAGA # Right flank : CCGGGGCCTGGTCCTGTGCAGTGGCTCCAGGAGTGTGGGAGCAATCCCTTCGTGATCGTTTTCCCACGGTTGCCGCGCCGCTACGGATGAAGGAGCACGCCCCGCCCCGCCCCGTTCAGCTCGCGGGGTTGAACGGCACTCCCTTGGGGAGGGCCTTGGTCAGGTGGCCGGTGAACCGGTCCTCCCGGATGCCGATCGTCGCCTTGCCGAAGTCGGCGGCGAGGAGCTTGTCGCGGAGGCCGTCCGGGTAGCCGTTCCAACCGACCAGCGGTGCGTAGTGCCAGGTGCCGAAGTGGTTCTCCGGGGGCTCGTCCTTGGCGGTGGCCTTGCGGAAGCAGTGAGTGCTCGCGCCGTCCTTGTGGTAGACGACCTTGGCGTGCGTGCCGTCGAAGGGGACGTCCGCGGCCTTGTGGACCGTGAAGTTCCCGTGGGCCGATGTCGCCACGTACTCCGCCTTGTCGTCGTGGACCCAGACCACGATGTGCTCCCAGTCGTGGCGG # Questionable array : NO Score: 5.51 # Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGTGAGCGGGGGTGTTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCGAGCGGGGGTGTTCCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.20,-13.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 220423-220089 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHHEH010000005.1 Streptomyces sp. COG21 ctg.s1.000005F_arrow, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 220422 29 100.0 32 ............................. GTCGCCGTGGCCGTCACGGGGCGCGGGGCGCC 220361 29 100.0 32 ............................. CGATGTCCCCGCTCGACCGCACCGCACGCCGC 220300 29 100.0 32 ............................. GAGGCCGACGGCATCGACGGTGTCCTCGCACT 220239 29 100.0 32 ............................. AGGACGTCGATATCGACACGGAGCTCTCTGGC 220178 29 93.1 32 .....................G...T... GACCTCTGGGAGGACAACCTGTGTCGGTGGCC 220117 29 79.3 0 A...........A...........CCAT. | ========== ====== ====== ====== ============================= ================================ ================== 6 29 95.4 32 GTGGTCCCCGCGCACGCGGGGATGGACCC # Left flank : CACCGCCCTCACCGCAGGCCTCCCCGCCGAGATCAACTCCCCCATCGGCTTCCTCCGCCGCCGCCTGACGACCAAGCTCCCCCCGAACCTGCCCCCGGCGACCACCACTCGCCCCACCCCGGCCGCTCCCGCCGCCCGCGTCCTGGTCGAATGCACGGAATGCGGCACCCCCGGCCCGCCCCAGGCCCTCCCCGACGGCCTCTGCCGCCCCTGCCGCGAAACCTGCGCCACCGGGCCCGGAAACCCGTCACCCGTCCTGACCGCACCACCGGACATTAAGACCCACCTGGCCAACCTCCGCAACCTCCTCAAGCCCGTCTGAACCGGACGGCACCCTATTCAGGGGAACGGGCATCGGCCTTGGCGACCCAGGGGCAGAATCGCCTCTGGCAAGGAGAGCAGCCGACCCAACGACGATCAACACGGTGGGGGATATGTCCGTTTGTCAAGAAGTGAGTAAAAACAGCACCCTGGCCGGATAAACCCGCAGGTCACGAACT # Right flank : TCAACGAAGCTGCGCTCCTGCCGGTCGCGGCCCTCGGCGGATGGCGGCCGTTGGACAGTGTCCGGCCGATCACGACGGCCCGCGGAGAGTCGGGCCGCACTTGCCTGACCACCAGCCGTCACGGCACGGATACGGCGCCCGTATCATCCCGTCATGATCATGCTATCTGTCGACCCTGCCTCGCGGAGCTACGCCGATGGCCAGGCGGTGGGGCAGCTTCTGGTTCTCGCCGTTGCTCTGGTCCTTGTCTGGGTCGTCACCCGGACCTGGCGGCGAGGTCCGGCCCCGGACGGTCCGGACGACGTGGAGAGAACCACCGCCATCGCCGTACGGCGTGGCAACATCGTCCGCGGAGTACTGCTGGCCATAGCCGCCGCCGGGCTGATAGGGATCTTCACCGGCAGGGGATACCAACCTGCCGCAGAGGCGGCCCCCACCGCCCAAAAGCCTGTCGCCCAGTCGCCCTCCGCCACGACGGCGCCTGCGGAGATCAAGCGCGT # Questionable array : NO Score: 6.03 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGATGGACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGGTGGACCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 1237905-1238055 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHHEH010000008.1 Streptomyces sp. COG21 ctg.s1.000000F_arrow, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1237905 29 100.0 32 ............................. GGCGGCTGGTGGTAGGTGCGGCCGAGACTGTC 1237966 29 100.0 32 ............................. CGGTCGACTCCGATGCGCTCTGCGAGGCCGTA 1238027 29 96.6 0 ........................A.... | ========== ====== ====== ====== ============================= ================================ ================== 3 29 98.9 32 GTCGTCCCCGCGCGTGCGGGGGTGGTCCC # Left flank : CACCGCAGGCCTCCCCGCCGAGATCAACTCCCCCGTCGGGTTCCTCCGCCGCCGCCTGACCACCAAGCTCCCACCCCACCTGCCCCCACAGACCACCACCCGCCCCACCCCGACCACTCCGCCCGCCCGCGTCCTGGTCGAATGCACGGAATGCGGCGCCCCCGGCCCACCCGAGGCCCTCCCCGACGGCCTCTGCCGCCCCTGCCGCGAAACCTGCGCCACCGGGCCCGGCGACCCGTCACCCACCCTGCCCGCACCACCCGATATCAAGACCCACATGGCCAACCTCCGCAACCTCCTCAAGCCCGCCTGAACCGGACGCTCACCGTGCTGCTTGACCTCAGGGAAACGAGGGACGGTCTCGGCAGCCGAGAGGCAGAATTGCCTTTGGCAGACGAGCAGCCGACCAGCGACGACCCGTAGGGCGGGGAGAAATGTCCGTTTCTCAAGAAGTGAGTAAAAACAGCACCCTGGCCGGATAAACCCGCAGGTCACGAACT # Right flank : CAATGGCCAGCTGACCATAGTCGGGGCCAGTTCGTGGTCCCCGCCCACGCCGGGCTATCGGCCCACCAGCCCCCTCACACCCCCAACTCCCCCCGCGAATCCGCAATCGCCTCCGGATACGCGGCCAGCAACCGACGGGCCACCGGCAGCGGCATCCGCACCACCACCGGCTGCGGGAGCGTCAGTTCGCGTTCCGCTACTGCTGTGCGGGAGGAACGCACCCGGTCCGTCACCCGTGCCACCACCCGGACGTCCAGGGTGAACTGGACCAGCACCGAGGCGAACTTCGGCTTGTGCAGGGGCATCGAGCCCGCGCCACTTGCCGACGCGTCGGTGGCCGAGCCCGCGCCGCCTCCGTTGGCCATCAGTTGGTTGAGGCGGAACTCGTCGGCGTTGAGGACTCCAGCGCCGAGGAGGCCTCGGGCCTGGCGGCTCTTTTCGGCTGCGGACTGGGCGTCGGTCTGGGTGGGGCGGGGGGCGGTCAGGTCGCTTTGGGCCAC # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCGCGTGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGTCCCCGCGCGTGCGGGGTTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 1381391-1381541 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHHEH010000008.1 Streptomyces sp. COG21 ctg.s1.000000F_arrow, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1381391 29 96.6 32 .........................C... GCCGCCTCCAAGGCCCCGGTCACCGCATGTTC 1381452 29 100.0 32 ............................. CGCCTCCTGGCCGTGCCCACCACCGTGCTGGA 1381513 29 79.3 0 ............T.........GCC..GG | ========== ====== ====== ====== ============================= ================================ ================== 3 29 92.0 32 ATGGTCCCCGCGCGTGCGGGGGTGGTCCC # Left flank : CGGACGCCGTACGCGAAGGGATTCTCCGGTGGCTGACCGGAGCGACCAGGAACGAGCTGACCTCCCAAGACCGCCCACCGCTTCCCACGGCGGAGGAGCTGGCCACCGGGGTGCACGTACGCCCGGAGGCGGGCCCGGGGCTCATCGCCCTACGAGCAGTGCTCCGACACTCCCGGCTGCACCCCGTCGACTCGCTACCCACAGCGCACCTGGGAGCGGGGTGGCAGGCCGCCGACAAGGGGCTGAGGCGGGGGTGGGGGTGGGGTGGCAGCTCTGGTGAAGGGGGTTGAGGTGCGGGCGGTGGTACGTCGAGCTTGCGGCTGCGGTAGCGGGGGCGCGGCCCGAGGCTCATCCGGCGGGGTGGACAGCGTGCTCACGACCGGAACAATGGGGACTCGGCTCGCGCCTCGGGCCGCCGATGAAGCGAGGTCGATATGTCCGTTTCCCGGGAAGTGATGGAAAACAGCACCTCGACCGCATAAACCCGCAGGTCAGGAACT # Right flank : GCGGAGCCGACGAACGCCCCCCATCTGCCCGTTCCCCAGGGCGTGCGCACCCTCCGAGGCACCGCGAAGGACGGCCGGCGGAGGATGCGCAGCCCCGGGCCTGGCGGCGGCAGCCGGCGCTCGGTGCAGGCGCTCAGTGGCCGTACGCCCCGCACAGGCCCCCGCCGCCGTCTTCCGCCGCTACCGTCCCGCAGCGTTACGGAGGTCACGCTCGCGCCGCATACTCCGCGAGGGCGAGCGCGCAGTGAACGGTACGGCCGTCCTCGCTGACTCCCCACGCGTCGGCCAGCGCCTCCACGATGCCCAGTCCGCGACCGCCCTCCGAGGTCTCGTCCACAGCCCGGAGCACAGGACGCACGGGAGAGAGCTGTCCTCCACCCGCATCGTCAGATGCGTGACGTCAGCGCACCAGGTGACGGTGATGCCCTCTCCGCCTCCGTGCTGGAAGGCGTTCGTCACCAGCTCCGTGAGGACGAGCGCGGCCACGTCGATGCAGGGTC # Questionable array : NO Score: 3.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.60, 5:-1.5, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGGTCCCCGCGCGTGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGTGCGGGGGTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.40,-0.70] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //