Array 1 15756-15390 **** Predicted by CRISPRDetect 2.4 *** >NZ_PRLO01000018.1 Candidatus Nanoperiomorbus periodonticus strain TM7_ EAM_G5_1_HOT_356 G51EAM_18, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 15755 36 100.0 30 .................................... GCCGTCTCGTTCAGAAGCGCTCCGACGATA 15689 36 100.0 30 .................................... TTTACAAGTGCAAGTAGCTTATTATCTGAG 15623 36 100.0 30 .................................... GATAAAGTAAAAGCCAAGTGTAAAGAGATA 15557 36 100.0 30 .................................... TGGCATTCTGCGTGTTGGTGCTGGTGCTCG 15491 36 100.0 30 .................................... CGGGTGAGGCTACGGACTCGAACGGGGGCG 15425 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 6 36 100.0 30 GTTATAGTTCCCTAACAATTTAGATAGTTGTATAAT # Left flank : TAGTTCCCTAACAATTTAGATAGTTGTATAATCTCGGGCTTCTTTGACTGTAGACAAGTTC # Right flank : ACTCACCCAAAATCCCCTCTGTTACAGAGGGGATTTTAGTTTAGAAAAATGATAATTGATCGGCTTTAACCAGCTCTTCTTGGTCAGTTTTCTCGCCTAGGATGATGAACATAGTAGCGAACTGATGCTCGGTGACGAGCAGCGCCCGGATAGAGCCTTTGGTATTTGCCGGCGTATTCTTGGTGACTCTGGTGAGATGTTTCATGGCCACGTCTCGATTAGGACACAGCCTGCTGTAGACGCTGAACTGTAGCATATCAAAGCCATCCCCAACTAAGAAGTTGCGGAATTGACTAGCCTGCTTGCGCTCGGCTTTCGTTCCTGTGGGCAAATCAAATAGTACCAACACACGCATATAACGGTAGCTCATGATTAAGATCGACTTAGCGATTAAACTTGGGCAATTGAAGCGAGCCGGGCGACTTGTCGTTAATAGCCTGCACTAGACTACTGACGGTTAAGTCTATGGCGTCTCGCACTGTAAACTGCTTATCTTTGAT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATAGTTCCCTAACAATTTAGATAGTTGTATAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.60,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 27858-28091 **** Predicted by CRISPRDetect 2.4 *** >NZ_PRLO01000009.1 Candidatus Nanoperiomorbus periodonticus strain TM7_ EAM_G5_1_HOT_356 G51EAM_9, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================= ================== 27858 37 100.0 29 ..................................... TTTTCAAAGCAAAAATCATCACACTTGTA 27924 37 100.0 29 ..................................... GAATTGAAGCGCCGGCAAGCGCCGGACGG 27990 37 100.0 28 ..................................... TACTGTTACGCTAGGGGCTGGCGAGGGC 28055 37 97.3 0 G.................................... | ========== ====== ====== ====== ===================================== ============================= ================== 4 37 99.3 29 CGTTATAGTTCCCTAACAATTTAGATAGTTGTATAAT # Left flank : AATTCTTTCGCTTTGAAGCTGGTCGGGGCAAAGTGCTAATCGATGGCAACGAATATGCTGTGTCTGACGGCAGCGCCATCATTGTGCCGGCCGGTGCTGAGCATAATGTCATCAACACCGGTGATGAGCCGCTGAAGCTGTACACTATCTACAGCCCGGCGCATCACAAAGACGGCATCGTCAGGGCGACACGCCAGAAAGCCGAGGCTAATGAGGAAGACTTTGACGGCGTAACGACTGAGTAAAGTAACCTCTCAGCGGTTTTTGTGCGGTGGGTTGCGTGAATCGGTGTGGCTGATATGCCATGCCTCGGGTATGTTGCATAAGGAGAAAATCTTGGTTGCACTCCGCATTCTTTACCGCATGTCGTATCCCCCCAACCCAAAAGCCAGTGCTCGTGTGGGAAACGGGAAATTCGCTATGCGAGGGGATCTTAGAGGGATGCAAATCCGTTAGGATTTGTAACGAAAAGTTGCCCACCCAGCGGTGGGCTGACTTTT # Right flank : TTTTCAAAGCAAAAATCAT # Questionable array : NO Score: 2.82 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGTTATAGTTCCCTAACAATTTAGATAGTTGTATAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.60,-0.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //