Array 1 73678-74080 **** Predicted by CRISPRDetect 2.4 *** >NZ_NFEH01000124.1 Bacillus thuringiensis serovar kumamtoensis strain BGSC 4W1 4W1_contig000124, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ======================================= ================== 73678 28 100.0 38 ............................ GCAGACAGCCAAGCAACCATATGAGGAGGAATCTTAGG 73744 28 100.0 37 ............................ GCGTCCTCTTTTTATATAAAAGGAGGAACCTGGTAGG 73809 28 96.4 39 ..........T................. CATAACGGTTGGTTTATAGTCTCCAAAACGATAACCTGT 73876 28 100.0 37 ............................ ATCTCCGCCTACTCTTATTGATGAAATATATTTAAGT 73941 28 89.3 14 .................A...A.....C AACCTCCTAAACGT CGC [73960] Deletion [73983] 73986 28 100.0 39 ............................ ACTTATTAATAAGCCGGTAAGAGAGTCCTCTATTCAGGG 74053 27 75.0 0 GTT....-............T..T...A | T [74061] ========== ====== ====== ====== ============================ ======================================= ================== 7 28 94.4 34 TAAAACATAACAATAGATGTATTGAAAT # Left flank : ACCCATCCTATACAAGTCAACGATGTAGTGAATGTGGGTATATCCATAAAAATAATCGGCAAAATCAATCTACCTTTGAATGTCAGCAATGTAGTTTTAAAGTTCATGCAGACTACAATGCTGCCAAAAACATTTCTGTGTACAATATTGAGAAGGTAATACAAAGACAATTGAAGTTACAAGAAAAATTAAATTTAACAAAATATAAAGAACAGTATATAGAGCAGATGGAAAATATTAATTAAATAAGGTAGTAGTTTGGCGGATTTCCACGCCATAAATGGAGAAGTGATACACGGTAAATTTACCAAGTGTCAACGCCCCGTAAGGTAGTATCGAATGTTAGAAAACATTGATACATAGGCATTCTGAATGCTTTGAAGGATGTAACACAAAGACCGTTACATAATACATTAATTTGCTGGTAAAAAAGCAGGATATTGTTGATATATAAGGGATTGTCGCAATATTTATTGTTAATCATCCATATATTATCGAGA # Right flank : AGAATAACAAATCAATAAGAAAACCTGGGTGCAAGAGTGTGAATTATTAAATTTTTGGCGGATTTCCACGCCATAAATGGAGAAGTGGTACACGGTAAATTTACCAAGTGTCAACGCTCCATAAGGTAGTATCGAATGTTAAAAAAACATTGATACATAGGCATTCTGAATGTTTTGAAGGGTGTAACACAAAGACCGTTACACGATACATTAATTTGCTGGTAAAAAAGCTGGATATTGTTGATATACAAGAAATTGTCGCAAAATTCATTGTTAAACATCCATATATTATCGGGGTTAAAACATAACAATAGATGTATTGAAATGGGTTTATTCGTGTCTTTCTTCGCCCTGATCACAATAGTTTAAATATAACAATAGATGTATTGAAATGTCTTATAAGTCCTCGTAATACTTAACGATCTACTGGTTAAAACATAACAATAAATGTTTTGAAATTGGGGAAACGCTTGGCACATCGCAAAATCATGGCAAAGTTT # Questionable array : NO Score: 5.70 # Score Detail : 1:0, 2:0, 3:3, 4:0.72, 5:0, 6:0.25, 7:-0.27, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TAAAACATAACAATAGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:82.14%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-17] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 1 8440-7972 **** Predicted by CRISPRDetect 2.4 *** >NZ_NFEH01000084.1 Bacillus thuringiensis serovar kumamtoensis strain BGSC 4W1 4W1_contig000084, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================== ============================================== ================== 8439 21 100.0 44 ..................... GCATATGGAGTAGAGGCATCGCGCGAACTGTGGTGGTTTAAAGC 8374 21 100.0 45 ..................... TGTGGAAGGTACGCTTTCTCACTGGGGACAATTCCAGTTTAGCAC 8308 21 100.0 43 ..................... AATATGTTGCCTTCTAAATGCTGAATTATTTCAAAGATAATGT 8244 21 81.0 46 ..G...T..G.T......... TAGGTCTTTTGTCTTGGTGATTCTCTACACTACGGCTAGTTAATGT 8177 21 85.7 34 ......TT.G........... TAGATATTTTATATCATTAAAAAGTGCTTAGCTT Deletion [8123] 8122 21 81.0 44 ......TG....C....G... TAGCTCAGCTGCAAATAATTTAGATGGGAATTTTCGTTTAACAT C [8117] 8056 21 95.2 43 ...T................. ATCCGTCTTAATGTTCTTCAATCGATTTTTATTTCTCTAAAAT 7992 21 95.2 0 ..G.................. | ========== ====== ====== ====== ===================== ============================================== ================== 8 21 92.3 43 TAACATAAGATGTATTTAAAT # Left flank : TAGTCAATGCGGATATATTTGTAAAGAAAATCGTTGTACACAAGCTGTTTTTGAATGTAAGCAGTGTGGATATAAAACACATGCTGATTATAATGCGGCGAAAAACATTTCTATCTATGACATCGAAAATATTATAAATAAACAATTAGCGGTACAAAGCAAATTGCATTCAAAAAAATGTATGGAAGAGTATATAGAAGAGTTAGGATACCTGGATTAATGTAGGTGATTGGGTTCCATATTAAATAATTTGGTGGATTTACACGCCATAAATGGAGAAGTAGCACATAAGAAATTTACCCAGTGCCAACACTCCGTAAGGTAGTATCAAATGTAAATAAACATTGATGCGTGGGCATTTTTCATGCTCTGAAGGGTGTAACACAAAGACCGTTACACAGTACATCTATTTGCTGGTAAAATAATGTTTAATGTTCATCTTATCAGTTTTTTTCCGCATCTGTTAAAGTAGCTATCTTTATTTCATTGGTATTTAACAC # Right flank : ATGTTTACAAAAAGCATTAAATTAAGCTAAGAAAGTGAATTTTATCAATACGTTTTTTTCTTTTACATATTAAAATGGAAGTACCCTTTCAATGCATACTGACCCCTTCACAAATCGTGAAGGGATTTTTTTATCCAATAAATGAGTTTTACAAAAGATACAAAATGTTAAATCTATAAAATCCAGTGATATCAGTATGCATGAGATCAATAGGTTTCTAATTGGATATTTAATGATGTGTTTTATAAAATATAAAAAGAAAATTCAAAACAAAACACCGCTTAACTGTAAGTGGCGATTCTTTTAATTACACTCTTTATTATAAAGAAAGATGAAATATAAAGGTCTAATGTAAAGTCCTTTACATTTCTTATCTAAAACTTTTGGAATATTTCATTTGGTGAATTATTTTAGGAAACGAATTTATATTTGTAACTATGTAAAAAAAGATAAACGTAACAAATTTGGTTTTATAAACACATCACGGTTTGAAATTACAT # Questionable array : NO Score: 4.81 # Score Detail : 1:0, 2:3, 3:0, 4:0.61, 5:0, 6:-0.5, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TAACATAAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:85.71%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //