Array 1 124880-128079 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJFK010000014.1 Pseudoalteromonas sp. SG41-2 NODE_14_length_146915_cov_65.3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 124880 29 100.0 32 ............................. ACATTAACGGTTGCTTACCAATTGACGAAACA 124941 29 100.0 32 ............................. AATTTTTGCCTCATGGACCAAATAAATAACGT 125002 29 100.0 32 ............................. CATATAGTGAACTACATCAGTCCACTTTATAG 125063 29 100.0 32 ............................. TTCAAGACACGGTAGTAAATTTCTGCAATCGA 125124 29 100.0 32 ............................. AATGATTTACCTTATGTGGTTACGGCTGGGAC 125185 29 100.0 32 ............................. CTCTATGTATTGCTGACTTGAGCCCCCCACGT 125246 29 100.0 33 ............................. TGGCACAGTAGATTTGGGTGACGGCCTTTTTGC 125308 29 100.0 32 ............................. CTGCAATCATCACTTGATGAGGAGCGTCAAAA 125369 29 100.0 32 ............................. CTCTAGGCCTTGAATTTGTACAATGCTAGTAG 125430 29 100.0 32 ............................. TGATAAACCCCTACTACCACGGCGCTAGAATA 125491 29 100.0 32 ............................. TTTTATTTTTTGCAGTTGTGATTTGTGCGTCA 125552 29 100.0 32 ............................. CTTGAAAACTTTACTGGTTATAGCTGCGGGGT 125613 29 100.0 32 ............................. AGCACTAAAAACGATGAGATATTCGACCCGCA 125674 29 100.0 32 ............................. CGTTGGTGATTTCATGGATATCATTTTAGACG 125735 29 100.0 32 ............................. ATATACTATGACGACACTGTATCAGCAGATAG 125796 29 100.0 32 ............................. AAGCGCAGCTGTTAACACGAAAGAAGGTGAAG 125857 29 100.0 32 ............................. AAATTAAATTACTTTGATACAGTTGCCGATAT 125918 29 100.0 32 ............................. CGGCATCAGCTTTTGTTATCTGCATTTGCTCA 125979 29 100.0 32 ............................. TCAATAGCTGTACGCTCAGAAATAAATCCAGT 126040 29 100.0 32 ............................. CAGTTTGGCCTAACTGAAAACTCACCAAATTT 126101 29 100.0 32 ............................. GCGTTACCGAGTTGTTGAGCGTACAAGTAGTG 126162 29 100.0 32 ............................. CGGGTGACACGTTAATAAACAGGTTTGATGGC 126223 29 100.0 32 ............................. TATTTGACATTAGTTCCTGATACTTTAGGGTC 126284 29 100.0 32 ............................. ATGGAAACCGACATCACAAGCGGTGGTGAGAA 126345 29 100.0 32 ............................. AATAAAGAAAAATCAGCGGTTGTTAATGACTT 126406 29 100.0 32 ............................. GTGCGAGTACTAATTTCAGTAAGCCCGTCATC 126467 29 100.0 32 ............................. CTAGCTGAATCGGTTTGAGCATCTTGAAATAT 126528 29 100.0 32 ............................. TATGCTGCCAGTGGGTTTGTGCATTTTGGCAA 126589 29 100.0 32 ............................. TTCTCCAAGAGCAACAACGGCCGCTACCGATT 126650 29 100.0 32 ............................. TATTGGATCTATCGCTATCCCAATAATACCTT 126711 29 100.0 32 ............................. AAAATGCAGCGCTTAAGAAGGAAGTTGCAGAG 126772 29 100.0 32 ............................. TATGTTACTGATGTGCGAATTACCAGCCACGG 126833 29 100.0 32 ............................. GTGTTCATATTTCAGATAACGTTTTTGCAAAT 126894 29 100.0 32 ............................. CTAAACGTAAGCTGGCGAAATTAATCCAGTCG 126955 29 100.0 32 ............................. TAAACCGTACAGACTGGGTTTATCTTGAAACA 127016 29 100.0 32 ............................. TAATGGAATTGCCAACTGATGCTGTGACTATA 127077 29 100.0 32 ............................. GACACGGCGACAGGAGAGTATGCGCCGAATGT 127138 29 100.0 32 ............................. CTTTGCCGTAAGGGCCAAAAACCTTTGTAGCC 127199 29 100.0 32 ............................. TTTTTATACCCGCCGGCAGGTACGATAGTGAG 127260 29 100.0 32 ............................. GCTAAATCATACCAGCGAGAAGATGATTTAAT 127321 29 100.0 32 ............................. TTAGCAGCCAAACAACTGGCGCTAACATAGAC 127382 29 100.0 31 ............................. TCTCTGGTAGGTATCACTATACTGCAGGGGG 127442 29 100.0 32 ............................. CTATCCAACATCTCATCATGGGCTTTTAACCA 127503 29 100.0 32 ............................. GGGTTTGACCTGTGAAAGTTAACGTAACTAAA 127564 29 100.0 32 ............................. TAGGCTCGAATTAAATCGAGCATACTTTGCAT 127625 29 100.0 32 ............................. GTTTGATAATGTTTTAATAATCGATTCAACAC 127686 29 100.0 32 ............................. CAGCTTGATGCCGTCAACCCCAAATTTATGAA 127747 29 100.0 32 ............................. CATTAAATCAATAAATTCTTGCTCTGTCATAA 127808 29 100.0 32 ............................. CTAGCGCCGCAATTTGTTAGGTGTAACGGGGT 127869 29 96.6 32 .............C............... CGGATAAATGGGCTAGATCTACTGATAACAGT 127930 29 96.6 32 .............C............... CCCTGCGCTTGTTGCCCAAGCTCTAGCCCTTG 127991 29 96.6 32 .............C............... TAAACGAGTTTAACGCTAACTTGCCAGAGCCC 128052 28 89.7 0 .................-........TT. | ========== ====== ====== ====== ============================= ================================= ================== 53 29 99.6 32 GTGTTCCCCGTACTCACGGGGCTGAACCG # Left flank : ATTAAGCGCTGGTGAGATCACGCCACCTAAACCATATGAAGATGCCCAACCGCCAGCACTACCAGAGCCTGAATCTATTGGCGATGACGGGCATCGCACTAATTAGGAGTGGATTATGAGTATGTGTGTTGTTGTAACTGAAGCTGTACCACCCAGATTAAGAGGGCGATTAGCTGTATGGTTACTAGAAATTCGCGCAGGTGTATACGTTGGTGATGTAGGTCGAAAGATTAGAGAAATGATTTGGTTTCAAGTCTCTGAGTTGGCAGAACAAGGAAATGTGGTTATGGCGTGGGCTACAAATACTGAATCGGGTTTTGATTTTATTACTTATGGTAAAAATGCACGGATGCCTATAGATTTAGAAGGATTAAGGCTGGTCAAGTTTACACCAGTAAACAACGAAACATTAAGCTAAAAATAACTGTTACGCTCTTTAAAAATTTGGTAGATTTGAACTAGCTGTTTTTATTTATAAAAAACAAGCATATACTATTAGA # Right flank : GGTGAATTTAACTGGCTAAGATTTCACTTGCTGAAGTGATCATTTTGCGTTGCGGGTGACATTTCGCGCTAAAGCACGGCCTACAGTACAGGACATTTGGAGTATTGTTGAATTTATAAAGGGAGGGGTTAAGCAACATGTAATACTTTGATTTGTCGCGAGGTAAACTCGCTGCTACGAATACATGGCTCTAATGCTATTCATCAAAGACTTGAATTTGATTGCGGCCTGTTTTTTTTGCCACGTAAAGTGCGCTGTCGGCGGCGAGGATCATCATATCGGCGGTGGTGTATTTATCTGGTTTACAGCTGTAACATCCGATGCTGAGTGTGAGGTGGTCGGCTACGTTTGAATTTGGGTGCAGGATATTTAGTTGGCTTATTTGCTGTTGCAGTAATCTGGCAAATTTTAAGCAGTGGGGTTTATCAATGCTGGGTAACACAATTGCAAATTCTTCTCCGCCGTAGCGAGCTGCTAAATCACCTTGTCGCTTACATAAG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGTACTCACGGGGCTGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGTACGCACGGGGCTAAACCG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.70,-10.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //