Array 1 73689-73496 **** Predicted by CRISPRDetect 2.4 *** >NZ_WQPY01000025.1 Butyricicoccus faecihominis strain MCC316 NODE_28_length_149735_cov_65.398529, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 73688 28 100.0 33 ............................ CAACGTAGAAACCATGACACGGTGTGACATGTG 73627 28 89.3 25 ........................GC.G CTGGAAAAGTCATTCCCAGCGCGTC 73574 28 100.0 23 ............................ CTGGGACTTTCAATATTTTTCGA 73523 28 96.4 0 .A.......................... | ========== ====== ====== ====== ============================ ================================= ================== 4 28 96.4 27 CTTTTCCCCACACACGTGGGGGTGATCC # Left flank : TTTTGGTGATTGCTAACACATGTGAAAACCCCATAAACGATTTGCTATGCGATGGAGATGTTTCGTTTATTGAAAATGGGAATGTTATATTTGACCTTGCTGTAATTAATGGAATAAACTTCAATAGATTTATTCAAGTAACAGTAGAGAGTCACCGATTGCAAGCAAAAACTATTAAGATTATATCTGACGTTCCTACAAGTATACTTGAGATAAGCGAAAAATATTTTAAGACGCATAAAGAAGTTATTCAACAAAGCTCATTGCCATCAGCAACCAAGTATTTACTCACAAATGCATAAATAATGGTAAAACTTTTGATTCTTACTCTTGACAAAACTTACTCCATCTATACCCCTTGCGGTTAGGTGGAGTTTTTTATGAAAATTAGTTTTTTTTGCGCTACAAAAATCATTTCTTTGGTATTTATAAATGTAGATGGCGAATGCGGACAACTGTATATTTGAGGATTATGCAATGCTTTTCGGATATCTTTAAGT # Right flank : CAAATTCCAGAAAGGAAGTGACCCAATGCAGTTAATACATGAACTTTCATGGTTATGGAAAGGAATAGCTATTATCGCACTTGTAAGTGCAATCGTTCTCATTGCAGCATTCAAGCTGCACAAAGAAGAATACAAAATTGAGATTGCATGCATTATTCTTATAGTGACTATACTGATTTGTATTATTGCTATGATTCTATGCGCTCGGGTTCCGATGCCCATATAAGCAGTCAATGACCCATGACTGAAGTCACGGGCTTGTGCAAACGAGCTCAGATTTTAGGCATGCTCGCAAGAGTGCATTGACTACCCTATGCACCGTAAGAGGTGCCCCGTTGCTCGCGAATAGATAGTTACCGCATGGCGTTAATCCTAACTGTGCGCTCTAAGACAACACATCACGTAAAGCTAAGGTAAGGCCGACAGGTGTGGCTGAATAAACCGCTTGCAACCTTGGGTAAGGATTTCGACTCCTCTTTTGAGGAGAGCGGCTTCTTCTT # Questionable array : NO Score: 5.27 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:-0.40, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTCCCCACACACGTGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCACGCAAGTGGGGGTGATCC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.20,-4.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 34143-33117 **** Predicted by CRISPRDetect 2.4 *** >NZ_WQPY01000067.1 Butyricicoccus faecihominis strain MCC316 NODE_99_length_36084_cov_108.615311, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 34142 36 100.0 30 .................................... TTATTTGCACGTTATGTTATACTGGTTATG 34076 36 100.0 30 .................................... ACATTTTGAACGGAAAGACGCAGCGTGACA 34010 36 100.0 30 .................................... AAGATGTTAATACGGACACCAGTGACCGTA 33944 36 100.0 30 .................................... TAAGTCATTGAGTAACCGGTAAGTAATCTG 33878 36 100.0 30 .................................... TTTGCAATACTGTTAACAAGATCTTCAAGA 33812 36 100.0 30 .................................... ATCTTTATCTGACCAGACCTTTCCAATGCT 33746 36 97.2 30 ..............C..................... TTATGGCCGCGGCCGTGGCCTTTGGCTTGT 33680 36 100.0 30 .................................... CTTCATCAATGTCAGCAATGCTCTGAGTAA 33614 36 100.0 30 .................................... AAATATATCTCTATAAAATACTAACGGCTC 33548 36 100.0 30 .................................... ATACCCCACCGCATCCGCAAGCTCAACAAC 33482 36 100.0 30 .................................... ATAATTGCGTGCAACGCATTTATGCCGCGA 33416 36 97.2 30 ..................................C. ATAATAGAAAGTGCGACTATCCATAATAGT 33350 36 88.9 30 ...................T..G...........GT CCCGCATTAACATCATGCAGCCGATCAAAG 33284 36 97.2 30 ......................G............. GCCGGCAGAAGCTGCGCCCCTACGCCCTCA 33218 36 88.9 30 .........C.....G....C.............C. GGATACCGTCAAGGACTTACACCACCTAGC 33152 36 80.6 0 .......C...........T..G..A.C......GT | ========== ====== ====== ====== ==================================== ============================== ================== 16 36 96.9 30 GTTTGAGAGTTGTGTAATTCTTAATGGTAGTAAAAC # Left flank : ATATGAAGAAATTGCTCTCGCAGCAGCCAATCACGCAGATACTCTCCGAAACAGCATGATCGCTTTAAATCAGATCGCTTTGCAAATCGCAACAGAGATGGAGTTTGACGTCAACTTTGTAGAGCTAACCGATCCGACACCTATCCTTAAACAATTTAATTTTTCAGTAGATGTCTCAAATCTGTCTTGCGTTGAAAGATTAACCCTTTACATTAAGTTACAACAACGATTCCTAAAGAAAAAGCTAGTTGCTGTTTACAACCTGAAAGCATGCTTGTCATCAGACGAATTAAACCTCTTCTACCAAACAATCTTATACGAAAAACTGCATATTCTTTTAATCGAAGACATTCAGCGCAGACATCCTCTGTCAATAGAGCATACATTTATTATAGACAGAGATCTTTGCATTTTCTAGATTTTTATGCTAAAATATAACCACTACCAAAGAATATAATCGTTTTGTTGTGACGATTTCCCTCACTTCCTCTGAATTTGAG # Right flank : CTCAGGAAAGGAGAATGCACTATGATTGTCCGTAAAAAAATCGAGCTTACGCAACCTTTGGCTTCCTTTCAAGTAGAAATACTTCACAATCTGCAATCAAGACCTGTTTCCCCGGATGAAGATTGTCCAGAACTCACCACAGATCAGCTGGCCCAGTTCCGAAGAATCTCTGCCGCAAACAGAAAAGAACGCTGTAAGACTTGAAGATTGAATTACTCTTGATAGCAGTAAAACTGCAGTCTCTCGCCAGTAGCAATGCTTTGCGTTTGAGAGTTGTGTAATTCTTAATGGTAGTAAAACTTCATAAGTGATTTTAGCGGCGGAAACCCACTTTTCTTTGAAGGGTGGGAGGAGCCGCTATCTTCTTTCTCAGCCTTGTTCGGCTATGTATTTTTCAATAGTAGTTGCAGATACCTCGCCGACACTGCAAGCGAAGTATCCGTCAGACCAGAAGATATGCTTCTTCCAGTAGTGCTTAGATAATAATGTGGGATATTTGA # Questionable array : NO Score: 3.11 # Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAGAGTTGTGTAATTCTTAATGGTAGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-2.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [17-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 1 47191-46673 **** Predicted by CRISPRDetect 2.4 *** >NZ_WQPY01000004.1 Butyricicoccus faecihominis strain MCC316 NODE_5_length_147556_cov_117.135193, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 47190 29 93.1 32 .....................G......C GTACGATCGATGTTGAATAGGCGTATGCATAC G [47188] 47128 29 96.6 32 ....C........................ TAAAGTTCAAGTCCTTTATCAGAGTACATCTG 47067 29 96.6 32 .....................G....... GTGGAACCCCGCTGGGCGCATTTATGACCATC 47006 29 100.0 32 ............................. CCGCTGCACCTGCATGATGGTGATCTGTTGCC 46945 29 100.0 32 ............................. TAAAGTTCAAGACCTTTATCAGAGTACATCTG 46884 29 93.1 32 .....................G..C.... CCTCTGTAGTAACAGCTTGTGGAATATACCAG 46823 29 93.1 32 ............G........G....... TGATCAAGATTGCAACATTTATCTGCCTTTTT 46762 29 86.2 32 A..........T.........G......C TCGCGCATTGCTTGGCGTACTCCCTCATTAAC 46701 29 82.8 0 .....................G...TAAA | ========== ====== ====== ====== ============================= ================================ ================== 9 29 93.5 32 GTTTTCCCCGCCAGTGCGGGGATCAACCT # Left flank : AAAGCTATTGATGGAATTGACGATATCCGCTTAGACGAAAAGGTTTCGGACGGATTTTCGGCAGTACAGAGAGTTGTAACGGTTGTTGGCATTGTATTGGCCATTATGCTTCTGGCCATTGCTATCGTTATTATGACCAATACCATCAACCTGACAATGCTAGCGCGTAAGGACGAAATCTCTGTTATGAAGATGATGGGCGCTTACGACGGGTTTATCCGCTTTCCATTTATCGTAGAAGGATGCGTAGTGGGTATCATCGGTGCTGTCATAGCATACTTGTTTTCTTCTGGCGTTTATACGGCGGTTTCCAACATGATGACGAAATCAGGTGCGCTTTCTATCGTTGCGTTTATGCCTTACAAGGATATTGCTCTTCCTCTGGCAGGGTTGATGTTGATGCTTGGTTTGGGCGTTGGCATCATCGGAAGTGTAATCACTATCCGCAAGCATCTCCGCGTATGAATAAGAAATTACATGATTTTTCTGCACTTTCTGAA # Right flank : ATACCATAAAGAAAGGACTGTCCCCCAATGATATTCGCAAGTGAAAAGAAATGGGTAAAAAAATTCACCGCTGGTGCGGTGGCGTCTTTGATGGTTGCAACTACATTCGTAGTTCCTGCATCAGCTACGCCGGCAAGTGACTACGAGAACAACTTCCAGCAGCGACAGGAGTTGCAGCAAAAGATCGATGCCAATAAGACAACGATAGACAATATCCAAAAAGAAAAGAGCAAGCTACAAACGCAATATGACGATGTTACTGCTCAGGTGAAGGATTTGAAAGAGGAAATTGCCAAGCTGGATCAGCAGATTGCAGTTCTGGAGAATGACATCGAAATCTCCAATCAGGAACTGGATGATAAATACGATGCATATTGCAATCGCGTGCGTAATTTCGAGGAGTATGGCACATCGAATTATTGGTCAATTATCTTCCAGTCGACTAGCTTGACTGACCTGTTGGGCCGCATTGATTTCATCAGCGAGGTTATGGATTATGA # Questionable array : NO Score: 5.35 # Score Detail : 1:0, 2:3, 3:0, 4:0.68, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCCCCGCCAGTGCGGGGATCAACCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGTGAGTGCGGGGATAAACCG with 88% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-8.90,-9.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 88773-88138 **** Predicted by CRISPRDetect 2.4 *** >NZ_WQPY01000004.1 Butyricicoccus faecihominis strain MCC316 NODE_5_length_147556_cov_117.135193, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 88772 28 89.3 33 ...CT................G...... TGAAAGTATAACGCACTTCTTCACTGAAGTCAA 88711 28 89.3 33 ...CT................G...... CGAGTTCGATAAAAATGAGCAGAAATATACTGA 88650 28 89.3 32 ...C........C........G...... CCACAAAAAAATAGAAGATGTTTGGGCCAAGC 88590 28 92.9 30 G....................G...... TATCACTATTTGATTCAGTTTGCAACTTTA C [88586] 88531 28 96.4 33 .............A.............. TCCACAAATGGTTGCTCGGTTTAAAGAAAATAC 88470 28 100.0 33 ............................ TATGCAGATCCTCGGCGATGGTTTTGTTCTCAA 88409 28 96.4 33 ............G............... CAATTCGATATGCCTCCGGCTCGCAGAGCATCG 88348 28 100.0 33 ............................ CGCATCTGGGACAGATCGTGCTAATATGCCTGC 88287 28 92.9 33 ...........G..T............. CGGTTATACTTTCGTGTTAGATTACTGGTGTGA 88226 28 92.9 33 ....C......G................ TTAGTGATTGCCCTATCTGCGGATGTCGTATAC 88165 28 96.4 0 ...........G................ | ========== ====== ====== ====== ============================ ================================= ================== 11 28 94.2 33 ATTTACCCCGCATGCGCGGGGATCAACC # Left flank : CCCTTGGTATTGCTAACCACAGCATGCCTATGTATGTGCCCGGTGAAGAGTCGAAAGACATTTTGGGCGAGGTGGGACGCCAGAAAAAAGAGATGGAGAGTCTTTCAAAGCATCAATGGGAGGCTGAGTGGCTTAAAAGGCATCATCTTATGGTCGACGGTGTATATGCTGCAGAAGTGGCTAATATTATTTCGCTTACTCAGGAGAATAGCACTGCGGCCGTGGTTATCCGGGCGGACGAAGATATTTGCGCACAGGATATGCTTGAGAGCATTGAAAAAGCCAACACACATGTTGTACTGGTTGAAGGTGTAGTGGGTTGTGCAAGTGACGCTTTTACGTTGGCATTGCTGCGCAGAACCAATAAGCGGCTCGTTTTATCTGTAGACGATGATCGGACTGTTGATGCTATTTCGAATGTCATCAAAAAAGTAGCACCAATCGTAGGGTAACAATCCGTGTTTTTCGATAGATTTTGTATCTTTGCAACATCTTTATGT # Right flank : ATGATGCTCTCACAGCTGAAACAGCGGGAATGTCAAAGGTTGCACAAAAATTCCATTGGTGATATAATACCAATATACGCTGAATAATAAAACGTGCAATACTGGGGAAGGAGAAACTTCATGGACTCAAATATACATGTAAGCGAGTTTGATACCTTCTTCGTTCCAAACCGAACTACCACGCAATTTTTGCGCGTTATTTCCTTTAATCCAGAAGTTCAGGCTTCCATAAAAAAATATTATATGGAAGCTGTTCACGCTGGTGTAGTTATAGAAGGAGAATTGCAAAATCCCACACCGCAACAGTTGACGTATTATAACGAGATAATGCCTTCTGGTTTTAAACTGGATGTTGGTTTTATATCGGACAGTCTTCGTGTATGGCTTCCTCGTATGAACTCAACTCCGCGCACGCGAATGTCAGAGGCCATATATGATGTGCTTACTGGCCTGCGAAAAAAAAGGAAGACCGAGAGTATCCTGCAAAACGCATATATCAA # Questionable array : NO Score: 5.29 # Score Detail : 1:0, 2:3, 3:0, 4:0.71, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.32, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTACCCCGCATGCGCGGGGATCAACC # Alternate repeat : ATTCTCCCCGCATGCGCGGGGGTCAACC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [5-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,1.01 Confidence: MEDIUM] # Array family : NA // Array 3 92688-92119 **** Predicted by CRISPRDetect 2.4 *** >NZ_WQPY01000004.1 Butyricicoccus faecihominis strain MCC316 NODE_5_length_147556_cov_117.135193, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ====================================== ================== 92687 24 100.0 37 ........................ TTCCCGTCCGCGCTGATCTGGCTCCTGCTCCAAAAGC 92626 24 100.0 37 ........................ TTCCCGGCTTCAAACCCTTATCTGGCAATTCCATTCA 92565 24 100.0 37 ........................ AACCTACGGTGGCGTGTCCGGGTGCAGGTATGCGAAC 92504 23 75.0 35 ..-.....T..AT.T..A...... AACCCGCATCTGTGCTGCTTCATTTGACCACAGGA 92446 24 95.8 38 ............C........... ACCCTTTCATACATAGTGAGTACAGATATCCGCGTATT 92384 24 95.8 37 ..............T......... ATCCTAGCATGATTGGCAGCCGGTGTCAAGAGAAATA 92323 24 95.8 37 ..............T......... AACCTTGTGTGGCGTGTCCGGGTGCAGGTATGCGAAC 92262 23 75.0 35 ..-.....T..AT.T..A...... AACCCGCAGCTGTGCTGCTTCATTTGACCATAGGA 92204 24 95.8 38 ...........A............ TTCCTAATTGGTGCGGTGGAGTTTTTTTGCGGTCTTGA 92142 24 91.7 0 ......................CA | ========== ====== ====== ====== ======================== ====================================== ================== 10 24 92.5 37 ATATTCCCCGCGAACGCGGGGGTC # Left flank : TGCATAGCCATGGCTGCAACCTGTTTGTTAATGGGAACGGCGATTGCAGCGAATGAAACTCCCAAAAAGGTAACATCTTCGACACCTGAAGGTGTTACATATGGAGTGGATCAGAAATATAAAGCCCCACCGGACACAAGTCGTTATGCTAATATCAAGACTGCGGCTGGATGTGTTGCACTCCTTGTTTTAATCGGTTCCGTTCCTTTCATCGTTACACGAGCAGGGAAGCGTAAAGAAAAGGACGGCAATTCTGAAAAGGAATATGTAGAGACATCTCATAAGGAAGCAGTACATCGCATTGTTGATACAAATCAGCGCTATCGGGCCTATATCGAACAATCCAATGATAAGGGTTACAACCTCGTTGTCGTTGGCACAAACGGTTATTGGACCGGAAATTTCCCGGATGAGGAACGTGCACATCGTTTTGCTTACGAAAACGGTATTGAATTGGATTAAATTCAACTCAAGCAAGCAAAATTTTAACTTTTCTAAGT # Right flank : ACCTACGGTGGCATGTCCGGGTGCAGGTATGCGAACATTCCCCTGCGTAAGCAGGGATGCCACAGCCTTCGCCGCTGACCTGAGCAAGTAAAACGATTTTCCCTGCGTAAGCAGGGATGCCCCATTCTCGCAGATATTGGGAATCTCTCCATCCGATTACCCCCTGCGTTGGCAGGGATGTTCCGACGCGCACCTAATTCAAAAAATTTGCTGCATTCTGAATTCCCCGTACGCGGGGTTGGCTCTCAGAAACAGATGCCGCTTTCGACGTATCACGCCTTTTCTCTGCTTTCGCAGAGTTGGCTCAAGCGTAAGGAAGAAGGATGCCCAGTTGGGGCGCGACTTGCCCTGCATTGGCAGGGGCCTTTCAATAGGCAATAAGTACACAAATAGTCCCCGCATTGACGGGGTTGAACCGAAAACCAAAACGGCAAGTACAGAAGAGCTTCCCTGCGCAAGCGGGGGTTCCAAAGTGGTTTGCATTTGCCACAGCAATCTCT # Questionable array : NO Score: 5.98 # Score Detail : 1:0, 2:3, 3:0, 4:0.72, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATATTCCCCGCGAACGCGGGGGTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.40,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.68 Confidence: LOW] # Array family : NA // Array 4 93603-93329 **** Predicted by CRISPRDetect 2.4 *** >NZ_WQPY01000004.1 Butyricicoccus faecihominis strain MCC316 NODE_5_length_147556_cov_117.135193, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 93602 29 100.0 32 ............................. TACCGGTTTCTTTTCGCTGAGTTGTGAAAAAT 93541 29 100.0 32 ............................. CAGAAGAGTCTTTCGGAATAAGCATCGACAGC 93480 29 96.6 32 ............................T GAGCGGATATGATTTAGTTCTTCATAATTGGA 93419 29 93.1 32 ..............C..........G... GTGTCTTTTTTGCGCCTATTTTAAGGAGTTTA 93358 29 82.8 0 ..............C......G...TT.T | A [93340] ========== ====== ====== ====== ============================= ================================ ================== 5 29 94.5 32 GTTTACCCCGCATATGCGGGGATGGACCC # Left flank : CGGCAAATGGGTTTCTGCCCATTTTGACGGAAGGATTCTCCTTCACGACAGAGCACTGTCTATGCTTTCTCAAAGAGAGTCCCGTGATGTTGACATTTCACTGCTGTGTGATGCACTGGACTTTCTTGGCACAGATTATTGGGAAACTGTATTTGGTTCGCTGTCACAGGAGAATATGCTCAATAACTGTTCTTTGAAGTATCAACGTCCGTTTTCTGTAGCGCCGATACAGGATCGTACAATCGCGCATACAACAACTCAGTATCACATCCCATATGCAGATAAGCCTAATGCGAAAGAGAAGATGCATCCGTTAAAGCTGCACTTGAAAGTAAGAAATGATTCTGCTTCACTCTTGAGGATTTACTTCTTTCTTGATAAACGGCGACAGTTGATAGTAATCGGCTCGCTGCCGCATCATCTGAAAACGATTACATCTTTTTGAGTATCAATTACTGTCTCAATAGACGATACAATGCAAATCGACAACCTCATTAAGA # Right flank : TGTGCGTAGTGAGGGAGAAAAAGCAGATAAGATCCCCCCTGCCTGAGCAGGGAATCAGCTCTATACGAATTTGAATAAATGTCTTGCAATAGAAGGAAGGATTCTCAATATATGAGTATCAAATCACTTATAAAATCTGGCTGCATAGCCATGGCTGCAACCTGTTTGTTAATGGGAACGGCGATTGCAGCGAATGAAACTCCCAAAAAGGTAACATCTTCGACACCTGAAGGTGTTACATATGGAGTGGATCAGAAATATAAAGCCCCACCGGACACAAGTCGTTATGCTAATATCAAGACTGCGGCTGGATGTGTTGCACTCCTTGTTTTAATCGGTTCCGTTCCTTTCATCGTTACACGAGCAGGGAAGCGTAAAGAAAAGGACGGCAATTCTGAAAAGGAATATGTAGAGACATCTCATAAGGAAGCAGTACATCGCATTGTTGATACAAATCAGCGCTATCGGGCCTATATCGAACAATCCAATGATAAGGGTTA # Questionable array : NO Score: 5.70 # Score Detail : 1:0, 2:3, 3:0, 4:0.72, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTACCCCGCATATGCGGGGATGGACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTTACCCCGCATGCGCGGGGATGATCCG with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.70,-9.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //